Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 seq19 89.7 4e-13 seq9 82.4 6e-11 >seq4 Length=27333975 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct 24477618 ATGCAGATTTTTGTGAAGACTTTGACTGGGAAAACCATTACTTTGGAGGTGGAAAGTTCT 24477677 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 ||| | ||| | || ||| || ||| || || ||||| |||| ||||| Sbjct 24477678 GATACAATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATTCCACCGGATCAG 24477737 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || ||| | |||| ||| || || ||||| |||||| | ||| |||| ||||||||| Sbjct 24477738 CAGAGGTTGATTTTTGCAGGGAAGCAATTAGAAGATGGAAGGACTTTGGCTGATTATAAT 24477797 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || ||||| || || | || | |||||||| || || Sbjct 24477798 ATTCAGAAGGAGTCTACTCTTCACCTTGTTCTTCGTCTGCGTGGGGG 24477844 >seq19 Length=18159812 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 |||||||| ||||| || || |||||||| || ||||| ||| | || ||| | Sbjct 4940890 ATGCAAATCTTTGTTAAGACCTTGACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCC 4940949 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || | ||| | | || ||| ||| || ||||| || || | || |||||| Sbjct 4940950 GACACCATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATCCCACCCGATCAG 4941009 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 || |||||||| | ||| ||||| || | || || | |||| ||||||||||||| Sbjct 4941010 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGAACTTTGGCCGATTATAAC 4941069 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || || || || || || | || |||||||| || ||||| Sbjct 4941070 ATCCAGAAGGAGTCCACTCTTCACCTTGTCTTGCGTCTCCGTGGTGG 4941116 >seq9 Length=21753712 Score = 82.4 bits (90), Expect = 6e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 111193 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111252 ||||| ||||| | || || || |||||||| |||| ||| || || || ||||| Sbjct 2446104 GACAAGGAAGGTATCCCTCCTGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAGCTGGAA 2446045 Query 111253 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111312 ||| ||| | |||||||||||||||||||| ||||| ||||| ||||| || ||| Sbjct 2446044 GATGGACGCACTCTTGCCGATTATAATATACAAAAGGAATCCACACTTCATTTGGTCTTG 2445985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421741423595848