Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16] 1,251 sequences; 1,874,765,253 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq15 91.5 3e-13 >seq15 Length=47181002 Score = 91.5 bits (100), Expect = 3e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || || |||| ||||| ||||| || || |||| || || ||| | || || Sbjct 34781321 GACTTTGACTATGATTACTTTGGCTTCAAGACTCTTGAGAGGTCTTACCTCTTAAAGGTT 34781262 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | ||||| | |||||| || ||| |||||| | ||| | || |||| ||||||||| Sbjct 34781261 CAAGGCAAAGTTGTGGAAAGACCTCAACACATGCTAATGAGGGTTTCTGTTGGGATTCAC 34781202 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTA-CACCGGAATGAGTGAACGCTGGATGAC 248987 |||||||| || || || || |||| || |||| | ||| | | || ||| | || Sbjct 34781201 AAGGATGATATCGATTCTGTTATCAAGACATATCACCTG-ATGTCTCAGCGGTGGTTCAC 34781143 Query 248988 ACATGCCACACCGACGCTCTTCAA 249011 ||||| | || || |||||||| Sbjct 34781142 TCATGCTTCTCCCACCCTCTTCAA 34781119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073749189202368