Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16]
1,251 sequences; 1,874,765,253 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq325 113 4e-20
seq13 113 4e-20
seq5 113 4e-20
seq449 111 1e-19
seq17 111 1e-19
seq317 109 4e-19
seq111 109 4e-19
seq673 107 2e-18
seq275 107 2e-18
seq104 105 5e-18
seq324 104 2e-17
seq96 96.9 3e-15
>seq325
Length=8951201
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| ||| ||||||||| |||||||||||| || || |||| |||
Sbjct 8316245 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCC 8316186
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 8316185 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 8316126
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| ||||||||
Sbjct 8316125 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTTC 8316066
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
||||| || || ||||| ||||| ||||| ||
Sbjct 8316065 CCCGTTAGGGTTTTCACGAAGATCTGCATCTT 8316034
>seq13
Length=34719086
Score = 113 bits (124), Expect = 4e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| ||| ||||||||| |||||||||||| || || |||| |||
Sbjct 8292195 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCC 8292254
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 8292255 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 8292314
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| ||||||||
Sbjct 8292315 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTTC 8292374
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
||||| || || ||||| ||||| ||||| ||
Sbjct 8292375 CCCGTTAGGGTTTTCACGAAGATCTGCATCTT 8292406
>seq5
Length=31606955
Score = 113 bits (124), Expect = 4e-20
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| ||||||||| |||||||| || ||| | | || |||| ||
Sbjct 1685087 GTGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTCCTTCCATCCTCCAACTG 1685028
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|| || || || ||||||| ||| ||||| ||||| | ||||||||||||| || ||
Sbjct 1685027 CTTACCAGCRAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTT 1684968
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
| ||| || | | | ||||| | ||||||||||| ||| || ||||| || ||
Sbjct 1684967 TGCCTTCACATTGTCGATGGTGTCCGAGCTCTCCACCTCCAAGGTGATGGTCTTCCCTGT 1684908
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|| |||||||||||||| |||||
Sbjct 1684907 CAAGGTCTTCACAAAGATCTGCAT 1684884
Score = 107 bits (118), Expect = 2e-18
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| |||| | | |||||||| || || ||||||||| ||||||||||| |
Sbjct 1684882 CCACCCCTCAGACGYAGCACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCC 1684823
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
| ||| | || || || || || || || || |||| || ||| ||||| || ||
Sbjct 1684822 AAWGTGCGGCCATCCTCGAGCTGCTTCCCKGCAAAGATCAGCCTCTGCTGGTCCGGTGGG 1684763
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| || ||||||||| || || |||||| | | | |||| | ||| |||
Sbjct 1684762 ATCCCYTCCTTGTCCTGGATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTCTCAACC 1684703
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||| || || |||||||| ||||| ||||||||||| || ||||||
Sbjct 1684702 TCCAAAGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAAATCTGCATG 1684655
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| || ||||||||| || | | || ||
Sbjct 1684408 ACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCGGCAAGGGTCCTGCCATCCTCT 1684349
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || |||||||| || ||||| | ||| ||||| || || | |||||||||||| |
Sbjct 1684348 AGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGA 1684289
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|||||| ||| || | | | |||| | || ||||| | ||| || ||||||
Sbjct 1684288 ATTTTTGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCAAGGGTGATAGTCTTG 1684229
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || ||||| || ||||| ||||||
Sbjct 1684228 CCGGTGAGGGTCTTGACGAAGATCTGCATG 1684199
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || |||||| || ||||||||||| || || |||| ||
Sbjct 1683952 ACCAAGTGGAGGGTTGACTCCTTTTGGATGTTGTAGTCTGCGAGGGTTCGGCCGTCTTCG 1683893
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| || | ||||| ||||| || || | || |||||||||
Sbjct 1683892 AGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGGGGGATCCCTTCCTTGTCCTGG 1683833
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| || |||||
Sbjct 1683832 ATCTTGGCCTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCAAGGGTGATGGTCTTT 1683773
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || || |||||||||||||||||
Sbjct 1683772 CCGGTGAGGGTTTTCACAAAGATTTGCAT 1683744
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || ||||||||| |||||||||||| || | | || ||
Sbjct 1684180 ACCAAGTGGAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTGCCATCCTCT 1684121
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| |||||||| ||||| ||||| | ||| ||||| || || | || |||||||| |
Sbjct 1684120 AGCTGTTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATCCCTTCCTTGTCTTGA 1684061
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | || ||||| | ||| || |||||
Sbjct 1684060 ATCTTGGCCTTGACGTTGTCAATGGTGTCGGAGCTTTCGACCTCAAGGGTGATAGTCTTR 1684001
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|| || || ||||| |||||||| ||||||
Sbjct 1684000 CCGGTGAGGGTCTTGACAAAGATCTGCATG 1683971
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||| || || ||| ||| ||||| |||||||||||| || ||| |||| ||
Sbjct 1684636 ACCAAATGGAGAGTGGACTCTTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCG 1684577
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||| || || || | || ||| ||||| || || | |||||||| || |
Sbjct 1684576 AGCTGCTTTCCTGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGA 1684517
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| || |||||
Sbjct 1684516 ATCTTGGCCTTCACGTTGTCTATGGTGTCGGAGCTCTCCACCTCAAGGGTGATGGTCTTC 1684457
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || |||||||||||
Sbjct 1684456 CCTGTAAGGGTCTTGACGAAGATTTGCAT 1684428
>seq449
Length=2648660
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| |||||||||||| || || |||| |||
Sbjct 2148487 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCC 2148546
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 2148547 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 2148606
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| ||||||||
Sbjct 2148607 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTTC 2148666
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| || ||||| ||||| |||||
Sbjct 2148667 CCCGTCAGGGTTTTCACGAAGATCTGCAT 2148695
>seq17
Length=24923725
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| |||||||||||| || || |||| |||
Sbjct 24420831 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCC 24420890
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 24420891 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 24420950
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| ||||||||
Sbjct 24420951 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTTC 24421010
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| || ||||| ||||| |||||
Sbjct 24421011 CCCGTCAGGGTTTTCACGAAGATCTGCAT 24421039
>seq317
Length=1923123
Score = 109 bits (120), Expect = 4e-19
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
||| || ||||| | | |||| || ||||| |||||||| || ||||| ||
Sbjct 1311309 GCCTCCCCTCAACCGAAGCACCAGATGGAGCGTCGATTCCTTCTGGATATTGTAATCCGC 1311368
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| || |||| || || || ||||||||||| ||||||||||| |||||||||||
Sbjct 1311369 TAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAACCGCTGCTGGTCGGGAGG 1311428
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||||||| || || ||| || | | ||||| || ||| ||
Sbjct 1311429 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTGTCCGAACTCTCRAC 1311488
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||| | || || |||||||| || || || ||||| ||||| ||||||
Sbjct 1311489 CTCGAGAGTGATGGTCTTGCCGGTSAGGGTTTTCACGAAGATCTGCATG 1311537
Score = 91.5 bits (100), Expect = 1e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| |||||||||| | |||||||| || || |||||||||||| || || |||
Sbjct 1310854 CCTCCTCTCAATCGCAGAACCAAGTGGAGAGTCGACTCCTTCTGAATATTATAATCGGCT 1310913
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || | || |||| || |||||||| || |||| || ||| ||||| || ||
Sbjct 1310914 AGGGTTCGGCCATCCTCCAACTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 1310973
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||| ||| || || ||| || | | ||||| | ||||||
Sbjct 1310974 ATTCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCCGAGCTCTCCACT 1311033
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| |||||||| || || || || || || || ||||| |||||
Sbjct 1311034 TCCAGAGTAATCGTMTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1311080
>seq111
Length=1131199
Score = 109 bits (120), Expect = 4e-19
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| ||||||| | ||||| |||| || |||||| || |||||||| || |
Sbjct 723099 CCACCCCTCAATCGAAGGACCAAATGCAAAGTTGACTCCTTTTGGATGTTGTAATCCGCC 723158
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| | | || |||| ||| || ||||| || ||||| | ||| || || |||||
Sbjct 723159 AGAGTCCTGCCATCTTCCAATTGCTTACCGGCAAAGATCAATCTCTGCTGATCTGGAGGA 723218
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCAC 45288
| |||||||||||| || ||||||||| || || | | || || ||| ||
Sbjct 723219 ATACCCTCCTTGTCTTGAA-TTTTTGCTTTCACGTTRTCAATCGTATCGGAACTCTCGAC 723277
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
||||| |||||| ||||| || || || |||||||| || ||||||||
Sbjct 723278 CTCCAGGGTAATTGTCTTCCCTGTTAGGGTCTTCACGAAAATTTGCAT 723325
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||| ||||| || ||| || || |||| || || || ||||||||||||
Sbjct 723819 TCCTTCTGGATGTTATAATCGGCGAGGGTCCGGCCGTCCTCAAGCTGCTTTCCGGCGAAT 723878
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|| | ||||| || |||||||| | |||||||| || || || ||||||
Sbjct 723879 ATGAGACGCTGCTGATCGGGAGGGATGCCCTCCTTATCTTGGATCTTAGCCTTAACGTTG 723938
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | | || | ||| || |||| ||| || ||||| || || || || ||||||
Sbjct 723939 TCGATGGTATCGGAGCTCTCGACTTCCAAGGTGATGGTCTTCCCSGTTAGGGTTTTCACA 723998
Query 45326 AAGATTTGCATG 45337
||||| ||||||
Sbjct 723999 AAGATCTGCATG 724010
>seq673
Length=4704030
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| |||||||||||| || || |||| |||
Sbjct 4141962 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCGGCCGTCCTCC 4141903
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || |||||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 4141902 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 4141843
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| ||||||||
Sbjct 4141842 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTTC 4141783
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
||||| || || ||||| ||||| ||||| ||
Sbjct 4141782 CCCGTTAGGGTTTTCACGAAGATCTGCATCTT 4141751
>seq275
Length=2000977
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || ||| |||||||||||||||||| || ||| | | || |||| ||
Sbjct 275273 GTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTCCCATCCTCCAACTG 275332
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
||||| ||||| ||||||| ||| ||||| ||||| | || ||||||||| ||| ||
Sbjct 275333 CTTTCCAGCGAAAATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTT 275392
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | |||| | ||||||||||| ||| || ||||| || ||
Sbjct 275393 AGCCTTCACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCTGT 275452
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
|| |||||||| ||||| |||||
Sbjct 275453 CAAGGTCTTCACGAAGATCTGCAT 275476
Score = 105 bits (116), Expect = 5e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||| |||| | | |||||||| || || ||||||||| ||||||||||| |
Sbjct 275478 CCACCCCTCAGACGCAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCCGCC 275537
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| ||| | || || || || || ||||| || |||| || ||| ||||| || ||
Sbjct 275538 AGAGTGCGGCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGG 275597
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| ||||||||||| || || ||| || | | | ||||| || ||| |||
Sbjct 275598 ATCCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAACTCTCGACC 275657
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
|||| ||| || ||||| ||||||| ||||| || || || ||||||
Sbjct 275658 TCCAGGGTGATGGTCTTTCCCGTCAAGGTCTTGACGAAAATCTGCATG 275705
>seq104
Length=1555027
Score = 105 bits (116), Expect = 5e-18
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168
||| || ||||| | | |||| || ||||| |||||||| || ||||| ||
Sbjct 784689 GCCTCCCCTCAACCGAAGCACCAGATGGAGCGTCGATTCCTTCTGGATATTGTAATCCGC 784748
Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228
|| || |||| || || || ||||||||||| ||||||||||| |||||||||||
Sbjct 784749 TAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAACCGCTGCTGGTCGGGAGG 784808
Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288
| |||||||||||| || || ||| || | | ||||| || ||| ||
Sbjct 784809 AATGCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCGATCGTGTCCGAACTCTCRAC 784868
Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337
||| | || || |||||||| || || || |||| ||||| ||||||
Sbjct 784869 CTCGAGAGTGATGGTCTTGCCGGTSAGGGTTTTCAMGAAGATCTGCATG 784917
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/227 (69%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
|| |||||||||| | |||||||| || || |||||||||||| || || |||
Sbjct 784235 CCTCCTCTCAATCGCAGAACCAAGTGGAGAGTCGACTCCTTCTGAATATTATAATCGGCT 784294
Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229
|| || | || |||| || |||||||| || |||| || ||| ||||| || ||
Sbjct 784295 AGGGTTCGGCCATCCTCCAACTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGA 784354
Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289
| |||||||| ||| || || ||| || | | ||||| | ||||||
Sbjct 784355 ATTCCCTCCTTATCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCCGAGCTCTCCACT 784414
Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||| ||||||||||| || || || || || || ||||| |||||
Sbjct 784415 TCCAGAGTAATCGTCTTCCCGGTTAGGGT-TTRACGAAGATCTGCAT 784460
>seq324
Length=8003036
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| |||||||||||| || || |||| |||
Sbjct 1599023 ACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTACGGCCGTCCTCC 1598964
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || | |||||| || | ||||| ||||| || || | ||||||||||||
Sbjct 1598963 AGCTGCTTGCTGGCGAAGATGAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGG 1598904
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| ||||||||
Sbjct 1598903 ATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATCGTCTTC 1598844
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339
||||| || || ||||| ||||| ||||| ||
Sbjct 1598843 CCCGTTAGGGTTTTCACGAAGATCTGCATCTT 1598812
>seq96
Length=1311920
Score = 96.9 bits (106), Expect = 3e-15
Identities = 147/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
|||| || || ||| ||||||||| |||||||||||| || | |||| || |
Sbjct 515716 CAAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTCCTTCCGTCCTCGA 515657
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
| || || || || || ||||||| ||| ||||| ||||| | |||||||||||| |
Sbjct 515656 GCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGA 515597
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
|||| |||||| | | |||| | ||||| |||| ||||| ||||| |
Sbjct 515596 TTTTAGCCTTAACATTGTCAATAGTGTCGGAGCTTTCCACTTCCAAAGTAATGGTCTTCC 515537
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || || ||||| || |||||||||||
Sbjct 515536 CGGTAAGGGTCTTGACGAAGATTTGCAT 515509
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395069176461271
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |