Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16] 1,251 sequences; 1,874,765,253 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq350 86.0 5e-12 seq10 86.0 5e-12 >seq350 Length=1502417 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || || | |||| |||||| ||||| || || || ||||| || || || Sbjct 383270 TCCTCCTCTCAGCCTCAAAACCAGGTGAAGCGTTGACTCCTTCTGGATGTTATAATCTGC 383329 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| || ||||||||||||||| || ||| | || | ||| |||||||| || Sbjct 383330 AAGAGTTCGACCATCTTCCAATTGTTTACCGGCAAAAATCAATCTCTGTTGATCAGGAGG 383389 Query 18218 CACGCCTTCCTTATC 18232 | |||||||||||| Sbjct 383390 GATGCCTTCCTTATC 383404 >seq10 Length=33391235 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||||| || || | |||| |||||||||||| || ||||| ||||| || || || Sbjct 21109347 TCCTCCCCTCAGCCTCAAAACCAGGTGAAGTGTTGACTCCTTTTGGATGTTATAATCCGC 21109288 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | |||||||||||| || || ||| | || | ||| |||||||| || Sbjct 21109287 AAGAGTTCGGCCATCTTCCAATTGCTTACCAGCAAAAATCAATCTCTGTTGATCAGGAGG 21109228 Query 18218 CACGCCTTCCTTATC 18232 | |||||| ||||| Sbjct 21109227 GATGCCTTCTTTATC 21109213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379338216307995