Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16]
1,251 sequences; 1,874,765,253 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1241 187 2e-42
seq855 181 9e-41
seq673 107 2e-18
seq449 104 2e-17
seq317 104 2e-17
seq111 104 2e-17
seq17 104 2e-17
seq4 104 2e-17
seq104 102 7e-17
seq325 96.9 3e-15
seq324 96.9 3e-15
seq13 96.9 3e-15
seq790 95.1 1e-14
seq699 95.1 1e-14
seq275 95.1 1e-14
seq12 95.1 1e-14
seq10 95.1 1e-14
>seq1241
Length=4265459
Score = 187 bits (206), Expect = 2e-42
Identities = 575/876 (66%), Gaps = 17/876 (2%)
Strand=Plus/Minus
Query 57546 ATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTT 57605
||||||||||| | || || || || ||| | |||||||| ||||| || || || ||
Sbjct 520352 ATGTTTCCGATCCAGTACCCGGAAATCTGGGAAATGTACAAGAAGGCCGAGGCCTCCTTC 520293
Query 57606 TGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAA 57665
||||||| ||| || || ||||| | |||| | || | ||||| |||| ||
Sbjct 520292 TGGACCGCCGAGGAGGTCGACCTATGCCAGGACATCCGCCACTGGGAGGCCCTATCCGAC 520233
Query 57666 TCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTT 57725
||||| | || | ||| | | || || ||||| || ||||| || || ||
Sbjct 520232 GGCGAGAGGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGACGGCATCGTC 520173
Query 57726 AACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTT 57785
|||||| | | | || ||| | || || || || | ||||| | |||
Sbjct 520172 CTTGAGAATCTCGCTGGGAGGTTTATGAAGGAGGTCCAGGTCGCCGAGGCCCGCGCCTTC 520113
Query 57786 TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGAT 57845
||||| || || | |||||||| ||| | || || || ||||| || || ||||
Sbjct 520112 TACGGGTTCCAGATAGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTCGAG 520053
Query 57846 ACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC 57905
|||||| | |||||| ||||||||| | | || ||| |||||||||| || || |||
Sbjct 520052 ACGTACATCAAGGACTCCGACGAGAAGCACCGCCTCTTCCACGCGATCGACACCATCCCC 519993
Query 57906 -GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTT 57964
||| |||| |||||||| ||||| | | | |||||| | || | | | | ||
Sbjct 519992 TGCG-TCGCGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGA---CGGCTCCGAGTCTTT 519937
Query 57965 CGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TG 58023
||| ||| | | | || || ||| ||| || || || ||||| ||||| || || ||
Sbjct 519936 CGCGGAGCGAATCGTGGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGAGTTTCTG 519877
Query 58024 CGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGT 58083
| || ||||||||| | || || ||||| | ||||| || ||||| || ||||||
Sbjct 519876 C-GCGATATTTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCCAACGAAC 519818
Query 58084 TGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTG 58143
|||| ||||| |||||||| | || || || ||||| | ||||||| | |
Sbjct 519817 TGATCTCGCGAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTACTCGCTGCTGA 519758
Query 58144 TCAATAAACCGACGCG-GGATCGCATCTTGGACATTATCACCG-AGGCGGTCGCGATCGA 58201
|| || | || ||| |||||| | | | | | || | | ||||| | ||||||
Sbjct 519757 GGAAGAAGCTGA-GCGAGGATCGGGT-TAAGTCGATCGTACGGAACGCGGTGGAGATCGA 519700
Query 58202 AAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGAT 58261
| ||||| || ||| || || ||| || || | ||||||||| ||| ||||
Sbjct 519699 GAGGGAGTTCGTGTGCGACGCGCTGCCGTGTGCGCTGGTGGGTATGAACGGCGATCTGAT 519640
Query 58262 GTCAAAGTACATTGAGTTTGTTGCCGACAGACT--TTTGCTCGAACTGATTGGAGAGCGT 58319
| | |||||| ||||| || || || | || | ||||| ||| | ||
Sbjct 519639 GGGCACGTACATCGAGTTCGTGGCGGATCGGCTGCTGGGCTCGTTGGGAT---ACGGCAA 519583
Query 58320 CAT-TACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGAC 58378
|| ||||| | || ||||| |||| ||| | |||||| || |||| |||||
Sbjct 519582 GATGTACAATGTCCAGAACCCGTTCGATTGGATGGAGCTGATCAGCCTGCAGGGGAAGAC 519523
Query 58379 AAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAA 58414
||||| || || || || |||| ||||| ||
Sbjct 519522 CAACTTCTTYGAGAAGCGCGTCGGCGAGTATCAGAA 519487
>seq855
Length=4499644
Score = 181 bits (200), Expect = 9e-41
Identities = 399/592 (67%), Gaps = 7/592 (1%)
Strand=Plus/Minus
Query 57546 ATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTT 57605
||||||||||| | || || || || ||| | |||||||| ||||| || || || ||
Sbjct 754458 ATGTTTCCGATCCAGTACCCGGAAATCTGGGAAATGTACAAGAAGGCCGAGGCCTCCTTC 754399
Query 57606 TGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAA 57665
||||||| ||| || || ||||| | |||| | || | ||||| |||| ||
Sbjct 754398 TGGACCGCCGAGGAGGTCGACCTATGCCAGGACATCCGCCACTGGGAGGCCCTATCCGAC 754339
Query 57666 TCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTT 57725
||||| | || | ||| | | || || ||||| || ||||| || || ||
Sbjct 754338 GGCGAGAGGCACTTCGTCTCGCACATTCTCGCCTTCTTCGCTGCCTCCGACGGCATCGTC 754279
Query 57726 AACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTT 57785
|||||| | | | || ||| | || || || || | ||||| | |||
Sbjct 754278 CTTGAGAATCTCGCTGGGAGGTTTATGAAGGAGGTCCAGGTCGCCGAGGCCCGCGCCTTC 754219
Query 57786 TACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGAT 57845
||||| || || | |||||||| ||| | || || || ||||| || || ||||
Sbjct 754218 TACGGGTTCCAGATAGCCATTGAGAACATCCACTCCGAGATGTACAGCCTCCTTCTCGAG 754159
Query 57846 ACGTACGTGAAGGACAACGACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCC 57905
|||||| | |||||| ||||||||| | | || ||| |||||||||| || || |||
Sbjct 754158 ACGTACATCAAGGACTCCGACGAGAAGCACCGCCTCTTCCACGCGATCGACACCATCCCC 754099
Query 57906 -GCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCACGTT 57964
||| |||| |||||||| ||||| | | | |||||| | || | | | | ||
Sbjct 754098 TGCG-TCGCGAAGAAGGCCCAGTGGGCCCTGAGATGGATCGA---CGGCTCCGAGTCTTT 754043
Query 57965 CGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTT-TG 58023
||| ||| | | | || || ||| ||| || || || ||||| ||||| || || ||
Sbjct 754042 CGCGGAGCGAATCGTGGCCTTTGCCTGCGTGGAGGGGATTTTCTTCTCGGGGAGTTTCTG 753983
Query 58024 CGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGT 58083
| || ||||||||| | || || ||||| | ||||| || ||||| || ||||||
Sbjct 753982 C-GCGATATTTTGGCTTAAAAAGCGCGGTTTAATGCCGGGACTGACTTTCTCCAACGAAC 753924
Query 58084 TGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTC 58135
|||| ||||| |||||||| | || || || ||||| | |||||||
Sbjct 753923 TGATCTCGCGAGACGAGGGCTTGCACTGCGACTTCGCGTGTTTGCTGTACTC 753872
>seq673
Length=4704030
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
|||| ||||| || ||||| || || || || || || ||||| ||| | || |||||
Sbjct 4141749 CAAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAGT 4141808
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| ||||||| |||| | || || | || ||||||||| ||| | ||||| |
Sbjct 4141809 CTTCCGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGG 4141868
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||||||||| || || ||||| ||||| ||| |||| ||| ||| | ||| |
Sbjct 4141869 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGGACCCTTGCCGACT 4141928
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
| ||||| || || || |||||||| || ||||| ||
Sbjct 4141929 ACAACATCCAGAAGGAGTCGACTCTGCACCTGGTGCT 4141965
>seq449
Length=2648660
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || ||||| || || ||||| ||| | || ||||| | |||
Sbjct 2148695 ATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACGATAACCCTAGAGGTTGAGTCTTCC 2148636
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| ||| | ||||| ||||||
Sbjct 2148635 GACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 2148576
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| ||| |||| ||| || | ||| || |||
Sbjct 2148575 CAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCGCCGACTACAAC 2148516
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || |||||||| || ||||| ||
Sbjct 2148515 ATCCAGAAGGAGTCGACTCTGCACCTGGTGCT 2148484
>seq317
Length=1923123
Score = 104 bits (114), Expect = 2e-17
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
|| |||||| || ||||| || || || || ||||| || ||||| |||| || ||
Sbjct 1311540 AACCATGCAGATCTTCGTGAAAACCCTSACCGGCAAGACCATCACTCTCGAGGTYGAGAG 1311481
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| |||| |||| | ||||| | || ||||||||| ||| | || |||||
Sbjct 1311480 TTCGGACACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCCGA 1311421
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATT 31367
||||||||| | || ||||| || || ||| | || ||| ||| | ||| ||||
Sbjct 1311420 CCAGCAGCGGTTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACCCT-AGCGGATT 1311362
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
| || || || || |||||||| || |||||||| ||| | ||||||| ||
Sbjct 1311361 ACAATATCCAGAAGGAATCGACGCTCCATCTGGTGCTTCGGTTGAGGGGAGG 1311310
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || ||||| ||||| || ||| | || ||||| |||
Sbjct 1310396 ATGCAGATATTTGTGAAGACCCTAACAGGGAAAACAATTACCCTGGAGGTTGAGAGCTCC 1310337
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | || ||| |||||||| | || || ||||||
Sbjct 1310336 GACACTATTGATAATGTCAAAGCTAAGATCCAGGATAAGGAAGGGATCCCACCGGACCAG 1310277
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || || ||||| |||||| | || || | || | |||||||||
Sbjct 1310276 CAGAGGCTGATCTTTGCTGGGAAACAGCTTGAGGATGGTCGCACCCTTGCAGATTATAAC 1310217
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
|| || ||||| || || || ||||| || ||| | || | ||||||
Sbjct 1310216 ATCCAGAAAGAGTCTACCCTCCATCTTGTCCTTCGTCTCCGTGGCGGT 1310169
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||||||||| ||||| || || || || || || || | || || || ||
Sbjct 1310625 CATGCAAATTTTCGTGAAGACCCTTACCGGGAAGACCATAACTCTGGAGGTCGAGAGTTC 1310566
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | | || | || || || || ||||||||| ||| | || || || ||
Sbjct 1310565 CGATACTATTGACAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCTCCGGATCA 1310506
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||| | || || || || || || || ||||| || ||| || ||||||||
Sbjct 1310505 GCAGAGGCTCATCTTTGCCGGGAAGCAATTGGAGGATGGCCGGACCCTGGCGGATTATAA 1310446
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||| || || || ||||||||||| || || || || ||
Sbjct 1310445 CATCCAGAAGGAGTCGACTCTTCACCTYGTGCTCAGGCT 1310407
>seq111
Length=1131199
Score = 104 bits (114), Expect = 2e-17
Identities = 165/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
|| |||||| || || || || || || || || || || |||||| | || || ||
Sbjct 724013 AATCATGCAGATCTTTGTGAAAACCCTAACSGGGAAGACCATCACCTTGGAAGTCGAGAG 723954
Query 31249 GTCCGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
||||| | |||| |||| | | | ||| | || ||||| ||| | || ||||
Sbjct 723953 CTCCGATACCATCGACAACGTTAAGGCTAAGA-TCCAAGATAAGGAGGGCATCCCTCCCG 723895
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
| ||||||||||| |||||||| || || ||| | || ||| ||| | |||||
Sbjct 723894 ATCAGCAGCGTCTCATATTCGCCGGAAAGCAGCTTGAGGACGGCCGGACCCTCGCCGATT 723835
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||||| || || |||||||| || |||||||| ||| | || ||||| ||||
Sbjct 723834 ATAACATCCAGAAGGAATCGACCCTCCATCTGGTGCTTCGTCTCAGGGGAGGTA 723781
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||||||||| ||||| || ||||| || || || ||| | || || || |||
Sbjct 723325 ATGCAAATTTTCGTGAAGACCCTAACAGGGAAGACAATTACCCTGGAGGTCGAGAGTTCC 723266
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | || | || ||| | ||| |||||||| || | || || || |||
Sbjct 723265 GATACGATTGAYAACGTGAAAGCAAAAATTCAAGACAAGGAGGGTATTCCTCCAGATCAG 723206
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || || || || || || |||||||| | |||| || ||||| |||
Sbjct 723205 CAGAGATTGATCTTTGCCGGTAAGCAATTGGAAGATGGCAGGACTCTGGCGGATTACAAC 723146
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| ||||| || || ||| | ||| |||| ||| || ||||||| ||||
Sbjct 723145 ATCCAAAAGGAGTCAACTTTGCATTTGGTCCTTCGATTGAGGGGTGGTA 723097
>seq17
Length=24923725
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| || || ||||| || || ||||| ||| | || ||||| | |||
Sbjct 24421039 ATGCAGATCTTCGTGAAAACCCTGACGGGGAAGACGATAACCCTAGAGGTTGAGTCTTCC 24420980
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||| ||| | ||||| ||||||
Sbjct 24420979 GACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 24420920
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| ||| |||| ||| || | ||| || |||
Sbjct 24420919 CAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCGCCGACTACAAC 24420860
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|| || || || |||||||| || ||||| ||
Sbjct 24420859 ATCCAGAAGGAGTCGACTCTGCACCTGGTGCT 24420828
>seq4
Length=23020739
Score = 104 bits (114), Expect = 2e-17
Identities = 161/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
|| |||||| || || || || || || || || || || |||||| | || || ||
Sbjct 9340312 AATCATGCAGATCTTYGTGAAAACCCTAACSGGGAAKACCATCACCYTGGAAGTCGAGAG 9340371
Query 31249 GTCCGACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
||||| | |||| |||| | | | ||| | || ||||| ||| | || ||||
Sbjct 9340372 CTCCGATACCATCGACAACGTTAAGGCTAAGA-TCCAAGATAAGGAGGGCATCCCTCCCG 9340430
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
| ||||||||||| || ||||| || || ||| | || ||| ||| | ||||
Sbjct 9340431 ATCAGCAGCGTCTCATMTTCGCCGGAAAGCAGYTYGARGACGGCCGGACYCTCGCMGATT 9340490
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
| ||||| || || |||||||| | |||||||| ||| | || ||||| ||||
Sbjct 9340491 AYAACATCCARAAGGAATCGACYYTCCATCTGGTSCTTCGTCTCAGGGGAGGTA 9340544
Score = 82.4 bits (90), Expect = 7e-11
Identities = 149/229 (65%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || || || || || || || || |||||| | || || || |||
Sbjct 9340544 ATGCAGATCTTYGTSAAAACCCTAACCGGGAAGACSATCACCCTSGAAGTCGAGAGYTCC 9340603
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | |||| | || || | || || ||||| || | || || || |||
Sbjct 9340604 GAYACGATCGAYAAYGTTAAGGCSAAGATCCARGATAAGGAGGGAATTCCYCCTGAYCAG 9340663
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | || || ||||| || || || ||||| ||| || | ||| ||||||
Sbjct 9340664 CAGAGRCTTATCTTCGCCGGMAAGCAATTGGAGGACGGCCGSACCCTAGCCGAYTATAAC 9340723
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || |||||||| || |||| || | |||| || ||||
Sbjct 9340724 ATCCAGAAGGAGTCGACTCTYCAYYTGGTKCTCCGRYTGAGRGGWGGTA 9340772
>seq104
Length=1555027
Score = 102 bits (112), Expect = 7e-17
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
|| |||||| || ||| | || || || || ||||| || ||||| |||| || ||
Sbjct 784920 AACCATGCAGATCTTCKTGAAAACCCTSACCGGCAAGACCATCACTCTCGAGGTYGAGAG 784861
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| |||| |||| | ||||| | || ||||||||| ||| | || |||||
Sbjct 784860 TTCGGACACGATCGACAACGTCAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCCGA 784801
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATT 31367
||||||||| | || ||||| || || ||| | || ||| ||| | ||| ||||
Sbjct 784800 CCAGCAGCGGTTGATTTTCGCCGGAAAGCAGCTCGAGGACGGCCGGACCCT-AGCGGATT 784742
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
| || || || || |||||||| || |||||||| ||| | ||||||| ||
Sbjct 784741 ACAATATCCAGAAGGAATCGACGCTCCATCTGGTGCTTCGGTTGAGGGGAGG 784690
>seq325
Length=8951201
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||| ||||| || ||||| || || || || || || ||||| ||| | || ||||| |
Sbjct 8316033 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAGTC 8316092
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
||||||| |||| | || || | || ||||||||| ||| | ||||| ||
Sbjct 8316093 TTCCGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGA 8316152
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||||||||| || || ||||| ||||| ||| |||| ||| || | ||| ||
Sbjct 8316153 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCGCCGACTA 8316212
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || || ||||| || ||||| ||
Sbjct 8316213 CAACATCCAGAAGGAGTCCACTCTGCACCTGGTGCT 8316248
>seq324
Length=8003036
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||| ||||| || ||||| || || || || || || ||||| ||| | || ||||| |
Sbjct 1598811 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAGTC 1598870
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
||||||| |||| | || || | || ||||||||| ||| | ||||| ||
Sbjct 1598871 TTCCGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGA 1598930
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||||||||| || || ||||| |||| ||| |||| ||| || | ||| ||
Sbjct 1598931 CCAGCAGCGCCTCATCTTCGCCAGCAAGCAGCTGGAGGACGGCCGTACCCTCGCCGACTA 1598990
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || |||||||| || ||||| ||
Sbjct 1598991 CAACATCCAGAAGGAGTCGACTCTGCACCTGGTGCT 1599026
>seq13
Length=34719086
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
||| ||||| || ||||| || || || || || || ||||| ||| | || ||||| |
Sbjct 8292407 AAAGATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACGATAACCCTAGAGGTTGAGTC 8292348
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
||||||| |||| | || || | || ||||||||| ||| | ||||| ||
Sbjct 8292347 TTCCGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGA 8292288
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||||||||| || || ||||| ||||| ||| |||| ||| || | ||| ||
Sbjct 8292287 CCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTGGAGGACGGCCGTACCCTCGCCGACTA 8292228
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || || ||||| || ||||| ||
Sbjct 8292227 CAACATCCAGAAGGAGTCCACTCTGCACCTGGTGCT 8292192
>seq790
Length=2681026
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/217 (70%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 31188 CAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAAC 31247
||| |||||| || ||||| || || || || || || || |||||| | || || ||
Sbjct 2379944 CAACCATGCAGATCTTCGTGAAAACCCTAACGGGTAAGACCATCACCCTAGAGGTCGAGT 2380003
Query 31248 CGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCG 31307
| ||||||| |||| | ||||| | || |||||||||||| | ||||| |
Sbjct 2380004 CCTCCGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGGCATTCCGCCGG 2380063
Query 31308 ACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATT 31367
|||||||||| || || ||||| ||||| ||| | || ||| || | ||| |
Sbjct 2380064 ACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCGCCGACT 2380123
Query 31368 ATAACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
| ||||| || || || || || || || ||||||||
Sbjct 2380124 ACAACATCCAGAAGGAGTCCACCCTCCACCTGGTACT 2380160
>seq699
Length=1873381
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| || ||||| || ||||| || |||||| | || || || | ||
Sbjct 139387 ATGCAAATCTTCGTGAAAACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCATCT 139446
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||||||||| | || || ||||||
Sbjct 139447 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAG 139506
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || |||||||| || ||| | |||||
Sbjct 139507 CAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAAGA 139541
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || |||||| | || || || | ||
Sbjct 139842 CATGCAGATCTTCGTTAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTGGAGTCATC 139901
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | | || | ||||| | ||| |||||||||||| | || || |||||
Sbjct 139902 CGATACCATTGACAATGTCAAGGCCAAAATCCAAGACAAGGAAGGCATTCCCCCAGACCA 139961
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGC-GATTATA 31370
|||| | | || || || || || ||| |||| ||| | ||| | ||| || || |
Sbjct 139962 GCAGAGGTTGATCTTTGCCGGTAAGCAGCTGGAGGACGGCAGGACCCT-AGCTGACTACA 140020
Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||| || || || || || || ||| |||| ||| | || | || ||||
Sbjct 140021 ACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTCGTCTCCGCGGTGGTA 140071
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| || || ||||| || |||||| |||| || || | |||
Sbjct 139615 ATGCAGATCTTTGTTAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCATCC 139674
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||||| | || || ||||||
Sbjct 139675 GACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCCCCAGACCAG 139734
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || || || || || ||| | |||||
Sbjct 139735 CAGCGTCTGATCTTTGCCGGAAAGCAGCTCGAAGA 139769
>seq275
Length=2000977
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||||| || || |||||| | || || || ||
Sbjct 275476 ATGCAGATCTTCGTGAAGACCTTGACAGGAAAGACCATCACCTTGGAGGTGGAGAGCTCT 275417
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||||||| | || || ||||||
Sbjct 275416 GACACCATCGACAATGTGAAGGCTAAGATTCAGGACAAGGAAGGCATCCCTCCGGACCAG 275357
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||| | | || |||||||| || |||||||| || | ||| || ||||| |||
Sbjct 275356 CAGAGGTTGATTTTCGCTGGAAAGCAGTTGGAGGATGGGAGGACCCTGGCTGATTACAAC 275297
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || || ||||| || || ||
Sbjct 275296 ATTCAGAAGGAGTCCACCCTTCACCTTGTCCT 275265
>seq12
Length=31678690
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 31189 AAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACC 31248
|| |||||| || ||||| || || || || || || || ||||| |||| || ||
Sbjct 16199321 AATCATGCAGATCTTCGTGAAAACCCTAACCGGYAAGACCATCACTCTCGAGGTCGAGAR 16199262
Query 31249 GTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
||||||| |||| | ||||| | || ||||||||| ||| | | |||||
Sbjct 16199261 YTCCGACACGATCGATAACGTCAAGGCTAARATCCAGGACAAGGAGGGCATCCYTCCCGA 16199202
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
|||||||| || || || || || || ||| | || || ||| | ||||||
Sbjct 16199201 TCAGCAGCGGCTTATCTTYGCCGGAAAGCAGCTCGAGGATGGCCGGACCCTTGCCGATTA 16199142
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || || ||||||||||| |||||||| || | || |||| ||||
Sbjct 16199141 CAATATCCAGAAGGAATCGACTCTCCATCTGGTCCTCCGTCTCCGGGGAGGTA 16199089
>seq10
Length=33391235
Score = 95.1 bits (104), Expect = 1e-14
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| || ||||| || ||||| || |||||| | || || || | ||
Sbjct 31310509 ATGCAAATCTTCGTGAAAACTCTTACCGGCAAGACCATCACCCTTGAGGTGGAGTCATCT 31310568
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || |||||||||||| | || || ||||||
Sbjct 31310569 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATCCCCCCGGACCAG 31310628
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
|||||||| || |||||||| || ||| | |||||
Sbjct 31310629 CAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAAGA 31310663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445759429327920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |