Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16] 1,251 sequences; 1,874,765,253 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq486 82.4 7e-11 >seq486 Length=229640 Score = 82.4 bits (90), Expect = 7e-11 Identities = 116/163 (71%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 38391 ACTAGACAT--TTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATG 38448 |||| |||| ||||||| ||| ||||| | || || | || ||||| ||||| || Sbjct 170253 ACTACACATACTTGAGGCCTTGGGGTTCCAGAATTGAAGAGGGTGGGAGAAGCATGAGTG 170194 Query 38449 AACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGA 38508 ||||| || |||| ||| |||||| || ||| ||| ||||| |||| Sbjct 170193 AACCACCGTTGAGACATCAAATGATATGTCCTGATAACAGAATCAATATCGTYCTTGTGA 170134 Query 38509 ATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTA 38551 || || | ||| |||||||||||||| ||||| || ||||||| Sbjct 170133 ATCCCAACAGAAACCCTCATTAGCATGTGTTGAGGCCTTTCTA 170091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468517473443440