Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16] 1,251 sequences; 1,874,765,253 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq16 84.2 2e-11 seq13 84.2 2e-11 >seq16 Length=20664393 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || |||||||||||||| | || ||||||||| ||| ||||||||||| ||||| | Sbjct 13874191 CAAGCAAAATCACAGTGAAGACCCTCATCTCTAGATATAAGCTCGTTTGAGAATGTCAAC 13874250 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCA 13249 || ||||| || || | ||||||| ||| ||||| ||| Sbjct 13874251 CCGGGCATTAGTCCCCTCTTTTTAAGCCAGAATATGGCA 13874289 >seq13 Length=34719086 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 13151 CATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGA 13210 || |||||||||||||| | || ||||||||| ||| ||||||||||| ||||| | Sbjct 17417189 CAAGCAAAATCACAGTGAAGACCCTCATCTCTAGATATAAGCTCGTTTGAGAATGTCAAC 17417248 Query 13211 CCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCA 13249 || ||||| || || | ||||||| ||| ||||| ||| Sbjct 17417249 CCGGGCATTAGTCCCCTCTTTTTAAGCCAGAATATGGCA 17417287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430975828999902