Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16] 1,251 sequences; 1,874,765,253 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq296 122 7e-23 seq317 104 2e-17 seq111 104 2e-17 seq275 98.7 8e-16 seq104 96.9 3e-15 seq12 91.5 1e-13 seq5 89.7 4e-13 seq449 86.0 5e-12 seq325 86.0 5e-12 seq17 86.0 5e-12 seq13 86.0 5e-12 seq4 86.0 5e-12 seq350 84.2 2e-11 seq699 82.4 6e-11 seq673 82.4 6e-11 >seq296 Length=1448965 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| || |||||||| | ||| | | |||| |||| ||||||||||||||| Sbjct 596809 CTCCTTTTGGATGTTGTAATCCGCAAGAGTCCTTCCGTCCTCCAGCTGCTTACCGGCAAA 596868 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 || |||| ||| || |||| |||| |||||||||||| |||||| ||| ||| Sbjct 596869 GATGAGTCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTTGCTTTCACATT 596928 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | | || || ||| ||||||| ||| ||||| || || ||||| || || || Sbjct 596929 ATCAATGGTATCAGAACTCTCTACCTCCAACGTTATCGTCTTCCCAGTCAATGTCTTCAC 596988 Query 48755 AAAAATCTGCAT 48766 ||| |||||||| Sbjct 596989 AAAGATCTGCAT 597000 Score = 84.2 bits (92), Expect = 2e-11 Identities = 122/174 (70%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| ||||| || |||||||| | ||| | | | || |||| |||||||| |||||| Sbjct 599264 CTCCTTTTGGATGTTGTAATCCGCAAGAGTCCTTCCKTCCTCCAGCTGCTTACYGGCAAA 599323 Query 48635 TA---TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTAC 48691 | | |||| ||| || |||| |||| |||||||||||| |||||| ||| || Sbjct 599324 GAYGATGAGTCTCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTTGCTTTCAC 599383 Query 48692 AGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAA 48745 | | | | | || || ||| ||||||| ||| ||| | || || ||||| Sbjct 599384 ATTATCAATGGTATCRGAACTCTCTACCTCCAACGTTATCRTCTTCCCAGTCAA 599437 >seq317 Length=1923123 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||| ||||| || || || ||| || |||||||| ||||| | ||| |||| | Sbjct 1310866 CGCAGAACCAAGTGGAGAGTCGACTCCTTCTGAATATTATAATCGGCTAGGGTTCGGCCA 1310925 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||||||||| |||||||| ||||| | ||| || |||| ||||| |||||||| Sbjct 1310926 TCCTCCAACTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTA 1310985 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||||| || || | | || || || |||||| |||| |||||| Sbjct 1310986 TCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCCGAGCTCTCCACTTCCAGAGTAATC 1311045 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || | ||||| || || |||||||| Sbjct 1311046 GTMTTCCCGGTTAGGGTTTTGACGAAGATCTGCAT 1311080 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| | ||| | ||||| ||| ||||| || || || ||||||||||| | Sbjct 1311309 GCCTCCCCTCAACCGAAGCACCAGATGGAGCGTCGATTCCTTCTGGATATTGTAATCCGC 1311368 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || |||| || | |||||| ||||| || |||| ||||| || || | || Sbjct 1311369 TAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAACCGCTGCTGGTCGGGAGG 1311428 Query 48659 AACGCCCTCCTTGTC 48673 || |||||||||||| Sbjct 1311429 AATGCCCTCCTTGTC 1311443 >seq111 Length=1131199 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | |||| |||||| || || || ||| || || ||||||||||| | Sbjct 723327 CCACCCCTCAATCGCAGCACCAAGTGGAGAGTCGACTCCTTCTGGATATTGTAATCCGCC 723386 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | | | || ||||| ||||| || || || |||| ||||| ||||||| |||| Sbjct 723387 AGAGTCCTGCCATCTTCCAATTGCTTGCCAGCGAAGATCAACCGCTGCTGATCCGGGGGA 723446 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||| || ||||| || || | | | | || || ||| ||| Sbjct 723447 ATACCCTCCTTATCCTGGATCTTGGCCTTCACGTTATCGATGGTATCAGAGCTCTCGACC 723506 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || ||||| | ||||| |||||||||||||| Sbjct 723507 TCCAGAGTAATTGTCTTCCCCGTTAGGGTTTTGACAAAAATCTGCAT 723553 Score = 91.5 bits (100), Expect = 1e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| | || | |||||||| | || ||| ||||| || |||||||| | Sbjct 723099 CCACCCCTCAATCGAAGGACCAAATGCAAAGTTGACTCCTTTTGGATGTTGTAATCCGCC 723158 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | | | || ||||| |||||||||||||| |||| || ||| ||||| | ||| Sbjct 723159 AGAGTCCTGCCATCTTCCAATTGCTTACCGGCAAAGATCAATCTCTGCTGATCTGGAGGA 723218 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||| ||| ||| || | | | || || ||| ||| Sbjct 723219 ATACCCTCCTTGTCTTGAATTTTTGCTTTCACGTTRTCAATCGTATCGGAACTCTCGACC 723278 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| || || || || | || || || ||||| ||||| Sbjct 723279 TCCAGGGTAATTGTCTTCCCTGTTAGGGTCTTCACGAAAATTTGCAT 723325 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/192 (67%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || ||||| ||||| | || | | | || || | || || || ||||| Sbjct 722678 CTCYTTCTGRATATTRTAATCSGCMAGRGTMCKRCCATCYTCSARYTGYTTCCCAGCAAA 722737 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| || ||| || |||| || | ||||||||||| |||||| ||| || Sbjct 722738 GATCAATCTCTGCTGRTCCGGTGGGATACCCTCCTTGTCCTGAATCTTAGCTTTCACGTT 722797 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || ||| ||||||| || ||||| || || || | || || || Sbjct 722798 RTCAATAGTRTCAGAGCTCTCRACCTCCAGAGTRATCGTCTTYCCTGTYAGKGTCTTCAC 722857 Query 48755 AAAAATCTGCAT 48766 ||| |||||||| Sbjct 722858 AAAWATCTGCAT 722869 >seq275 Length=2000977 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || |||| |||||| || || || ||| || || || ||||| || | Sbjct 275478 CCACCCCTCAGACGCAGCACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCCGCC 275537 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGG 48658 ||| | || | || || | |||||| |||||||| ||||| | ||| || || | |||| Sbjct 275538 AGAGTGCGGCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGTGGG 275597 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 | | ||||||||||| ||||| || ||| | | | || || ||| || Sbjct 275598 ATC-CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCCGAACTCTCGAC 275656 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| || || || ||||||||||| || || || ||||||||||| Sbjct 275657 CTCCAGGGTGATGGTCTTTCCCGTCAAGGTCTTGACGAAAATCTGCAT 275704 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || ||||| |||||||||| || | | | || ||||||||| Sbjct 275274 TGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCCAGGGTCCTCCCATCCTCCAACTGC 275333 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || |||| | ||| || |||| || | ||| |||||||| |||||| Sbjct 275334 TTTCCAGCGAAAATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATCTTA 275393 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || || ||||||||||| || || || ||||| ||| Sbjct 275394 GCCTTCACATTGTCGATGGTGTCAGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCTGTC 275453 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || || || |||||||| Sbjct 275454 AAGGTCTTCACGAAGATCTGCAT 275476 >seq104 Length=1555027 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 48552 CGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCG 48611 |||| ||||| || || || ||| || |||||||| ||||| | ||| |||| | Sbjct 784247 CGCAGAACCAAGTGGAGAGTCGACTCCTTCTGAATATTATAATCGGCTAGGGTTCGGCCA 784306 Query 48612 TCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTG 48671 || ||||||||||| |||||||| ||||| | ||| || |||| ||||| |||||||| Sbjct 784307 TCCTCCAACTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATTCCCTCCTTA 784366 Query 48672 TCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATC 48731 || ||||| || || | | || || || |||||| |||| |||||| Sbjct 784367 TCCTGGATCTTGGCCTTGACGTTGTCAATAGTGTCCGAGCTCTCCACTTCCAGAGTAATC 784426 Query 48732 GTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 | | |||||| | | ||| || || |||||||| Sbjct 784427 G-TCTTCCCGGTTAGGGTTTRACGAAGATCTGCAT 784460 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| | ||| | ||||| ||| ||||| || || || ||||||||||| | Sbjct 784689 GCCTCCCCTCAACCGAAGCACCAGATGGAGCGTCGATTCCTTCTGGATATTGTAATCCGC 784748 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || |||| || | |||||| ||||| || |||| ||||| || || | || Sbjct 784749 TAGGGTCCGGCCGTCCTCGAGCTGCTTTCCGGCGAAAATCAACCGCTGCTGGTCGGGAGG 784808 Query 48659 AACGCCCTCCTTGTC 48673 || |||||||||||| Sbjct 784809 AATGCCCTCCTTGTC 784823 >seq12 Length=31678690 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 48577 CTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATA 48636 |||| || || ||||| |||| ||| |||| |||| || | |||||| ||||| || | Sbjct 2679454 CTTTCTGGATGTTGTAGTCAGCTAGGGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGA 2679513 Query 48637 TCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAAC 48696 |||| ||||| || |||| ||||| |||||||||||| ||||| || ||| Sbjct 2679514 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGT 2679573 Query 48697 CCACAGACTCTGACGC-CTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || | || ||| ||||| | || || || || || || | ||||| || Sbjct 2679574 CTATAGTGTC-GCTGCTCTCGACCTCGAGAGTGATGGTCTTCCCGGTTAGGGTTTTCACG 2679632 Query 48756 AAAATCTGCATC 48767 |||||||||||| Sbjct 2679633 AAAATCTGCATC 2679644 Score = 86.0 bits (94), Expect = 5e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| ||| || | || ||||| ||| || || || || ||||| | Sbjct 4925750 CCTCCTCTCAGCCTCAAGACMAGGTGAAGCGTTGACTCCTTCTGGATGTTATAATCTGCA 4925809 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||||| | || ||||| |||||||||||||| |||| || ||||||||| | || Sbjct 4925810 AGAGTTCGACCATCTTCCAATTGCTTACCGGCAAAAATCAATCTCTGTTGATCAGGAGGG 4925869 Query 48660 ACGCCCTCCTTGTC 48673 | ||| ||||| || Sbjct 4925870 ATGCCTTCCTTATC 4925883 >seq5 Length=31606955 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || || || |||||||||| || | | | || ||||||||| Sbjct 1685086 TGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCCAGGGTCCTTCCATCCTCCAACTGC 1685027 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 ||||| || || |||| | ||| || |||| |||| ||||||||||| |||||| Sbjct 1685026 TTACCAGCRAAGATCAACCTCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTT 1684967 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || || ||||||||||| || || || || || ||| Sbjct 1684966 GCCTTCACATTGTCGATGGTGTCCGAGCTCTCCACCTCCAAGGTGATGGTCTTCCCTGTC 1684907 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| |||||||| Sbjct 1684906 AAGGTCTTCACAAAGATCTGCAT 1684884 >seq449 Length=2648660 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || || | ||||| || || || ||| || || || ||||| || | Sbjct 2148467 CGCCACCGCGGAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 2148526 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | || |||| |||| |||||| ||||| || || || ||||| || |||| | Sbjct 2148527 CGAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 2148586 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || ||| | | | || || | ||| | Sbjct 2148587 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAA 2148646 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| | || ||||| || ||||||| ||||| || || ||||||||| Sbjct 2148647 CCTCTAGGGTTATCGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATC 2148696 >seq325 Length=8951201 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || || | ||||| || || ||| ||| || || || ||||| || | Sbjct 8316265 CGCCACCGCGGAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 8316206 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | || |||| |||| |||||| ||||| || || || ||||| || |||| | Sbjct 8316205 CGAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 8316146 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || ||| | | | || || | ||| | Sbjct 8316145 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAA 8316086 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| | || ||||| || ||||| | ||||| || || ||||||||| Sbjct 8316085 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 8316036 >seq17 Length=24923725 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || || | ||||| || || || ||| || || || ||||| || | Sbjct 24420811 CGCCACCGCGGAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 24420870 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | || |||| |||| |||||| ||||| || || || ||||| || |||| | Sbjct 24420871 CGAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 24420930 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || ||| | | | || || | ||| | Sbjct 24420931 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAA 24420990 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| | || ||||| || ||||||| ||||| || || ||||||||| Sbjct 24420991 CCTCTAGGGTTATCGTCTTCCCCGTCAGGGTTTTCACGAAGATCTGCATC 24421040 >seq13 Length=34719086 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/232 (68%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || || | ||||| || || ||| ||| || || || ||||| || | Sbjct 6268065 CGCCACCGCGGAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 6268006 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || |||| |||| || | |||||| ||||| || || || ||||| || |||| || Sbjct 6268005 CGAGGGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGGG 6267946 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || ||| | | | || || | ||| | Sbjct 6267945 GGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGA 6267886 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATCGT 48769 |||| | || || || || ||||| | ||||| || || |||||||| || Sbjct 6267885 CCTCTAGGGTTATGGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATGGT 6267834 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || || | ||||| || || ||| ||| || || || ||||| || | Sbjct 8292175 CGCCACCGCGGAGGCGGAGCACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 8292234 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | || |||| |||| |||||| ||||| || || || ||||| || |||| | Sbjct 8292235 CGAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 8292294 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || ||| | | | || || | ||| | Sbjct 8292295 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAA 8292354 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| | || ||||| || ||||| | ||||| || || ||||||||| Sbjct 8292355 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 8292404 >seq4 Length=23020739 Score = 86.0 bits (94), Expect = 5e-12 Identities = 131/192 (68%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| |||||||| ||||| | || | ||| | || || | ||| || || ||||| Sbjct 9341647 CTCTTTCTGAATATTATAATCGGCAAGGGTACGACCATCCTCGAGCTGTTTCCCAGCAAA 9341588 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| || ||| || |||| || | ||||||||||| |||||| ||| || Sbjct 9341587 GATCAATCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGAATCTTAGCTTTCACGTT 9341528 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || || || ||| ||||||| || || || || || || | || || || Sbjct 9341527 RTCAATAGTRTCAGAGCTCTCRACCTCCAGAGTRATYGTCTTYCCTGTYAGKGTYTTCAC 9341468 Query 48755 AAAAATCTGCAT 48766 ||| || ||||| Sbjct 9341467 AAAWATYTGCAT 9341456 >seq350 Length=1502417 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || |||| ||| |||| || ||||| ||| || || || || ||||| | Sbjct 383271 CCTCCTCTCAGCCTCAAAACCAGGTGAAGCGTTGACTCCTTCTGGATGTTATAATCTGCA 383330 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| ||||| | || ||||| || ||||||||||| |||| || ||||||||| | || Sbjct 383331 AGAGTTCGACCATCTTCCAATTGTTTACCGGCAAAAATCAATCTCTGTTGATCAGGAGGG 383390 Query 48660 ACGCCCTCCTTGTC 48673 | ||| ||||| || Sbjct 383391 ATGCCTTCCTTATC 383404 >seq699 Length=1873381 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || || ||| || || || ||||| |||| ||| | | Sbjct 140060 AGACGAAGCACCAAATGGAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTCCTG 140001 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| ||||||||||||||| |||| | ||| || || | ||||| ||| ||| Sbjct 140000 CCGTCCTCCAGCTGCTTACCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCC 139941 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || || ||| | | | || || | ||||||||| | || Sbjct 139940 TTGTCTTGGATTTTGGCCTTGACATTGTCAATGGTATCGGATGACTCCACCTCAAGGGTG 139881 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | || || || || |||||||| Sbjct 139880 ATGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 139843 >seq673 Length=4704030 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || || | ||||| || || || ||| || || || ||||| || | Sbjct 4141982 CGCCACCGCGCAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGG 4141923 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 || | || |||| |||| |||||| ||||| || || || ||||| || |||| | Sbjct 4141922 CAAGGGTCCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGCG 4141863 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | |||||||||||| ||||| || ||| | | | || || | ||| | Sbjct 4141862 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAA 4141803 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| | || ||||| || ||||| | ||||| || || ||||||||| Sbjct 4141802 CCTCTAGGGTTATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATC 4141753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380931792011073