Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Malus_20domestica_20[refseq_20GCF_5F000148765.1_202012-08-16]
1,251 sequences; 1,874,765,253 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq317 91.5 2e-13
seq104 84.2 3e-11
>seq317
Length=1923123
Score = 91.5 bits (100), Expect = 2e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| ||||| | || || ||||||| ||||||||||| | || || || ||
Sbjct 1310395 TGCAGATATTTGTGAAGACCCTAACAGGGAAAACAATTACCCTGGAGGTTGAGAGCTCCG 1310336
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | ||||| ||| ||| || || ||| ||||| || ||||| || || |
Sbjct 1310335 ACACTATTGATAATGTCAAAGCTAAGATCCAGGATAAGGAAGGGATCCCACCGGACCAGC 1310276
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || || ||||| || ||||| | || ||| | | || | |||||||||| |
Sbjct 1310275 AGAGGCTGATCTTTGCTGGGAAACAGCTTGAGGATGGTCGCACCCTTGCAGATTATAACA 1310216
Query 146212 TACAAAAAGAATCGACTATCCAT 146234
| || ||||| || || |||||
Sbjct 1310215 TCCAGAAAGAGTCTACCCTCCAT 1310193
Score = 91.5 bits (100), Expect = 2e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||||| |||| || || || |||||| | || || || |
Sbjct 1311079 TGCAGATCTTCGTCAAAACCCTAACCGGGAAKACGATTACTCTGGAAGTGGAGAGCTCGG 1311020
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | || || || || || || ||| || || ||||| || || || |
Sbjct 1311019 ACACTATTGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGAATTCCCCCGGACCAGC 1310960
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || || ||||| || || || || || ||| |||| || | ||||||||||
Sbjct 1310959 AGAGGCTGATCTTTGCCGGAAAGCAGTTGGAGGATGGCCGAACCCTAGCCGATTATAATA 1310900
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || || |||||| |||| || || | ||||| ||||||||||
Sbjct 1310899 TTCAGAAGGAGTCGACTCTCCACTTGGTTCTGCGATTGAGAGGAGGTA 1310852
>seq104
Length=1555027
Score = 84.2 bits (92), Expect = 3e-11
Identities = 156/228 (68%), Gaps = 1/228 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | ||| | | ||| || || || |||||| | || || || |
Sbjct 784459 TGCAGATCTTCGTYAAACCCT-AACCGGGAAGACGATTACTCTGGAAGTGGAGAGCTCGG 784401
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| | || || || || || || ||| || || ||||| || || || |
Sbjct 784400 ACACTATTGACAACGTCAAGGCCAAGATCCAGGATAAGGAGGGAATTCCCCCGGACCAGC 784341
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| || || || ||||| || || || || || ||| |||| || | ||||||||||
Sbjct 784340 AGAGGCTGATCTTTGCCGGAAAGCAGTTGGAGGATGGCCGAACCCTAGCCGATTATAATA 784281
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259
| || || || |||||| |||| || || | ||||| ||||||||||
Sbjct 784280 TTCAGAAGGAGTCGACTCTCCACTTGGTTCTGCGATTGAGAGGAGGTA 784233
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786154106322920
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |