Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10]
2,019 sequences; 582,117,524 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq16 134 1e-26
seq12 131 1e-25
seq10 129 5e-25
seq17 125 6e-24
seq5 123 2e-23
seq13 122 8e-23
seq4 118 9e-22
seq1 109 5e-19
seq7 107 2e-18
seq11 105 6e-18
>seq16
Length=28979753
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| || | | | ||| | ||| | ||||||||||||||||| || |||||
Sbjct 1160193 TACCTCCACGCAGACGGAGCACAAGGTGAAGGGTAGACTCTTTTTGAATATTATAATCAG 1160252
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| |||||| || |||||||| ||||| ||| |||| || | ||||| || ||||
Sbjct 1160253 CCAAAGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATAAGCCTTTGCTGGTCTGGAG 1160312
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || |||||||| ||| || || || | || | |||||| ||||||| |
Sbjct 1160313 GAATTCCTTCCTTGTCCTGAATCTTAGCCTTGACGTTGTCAATGGTGTCGCTGCTCTCCA 1160372
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| ||| | || |||||||||| ||||| || || ||||||||
Sbjct 1160373 CCTCGAGGGTAATAGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 1160421
Score = 132 bits (146), Expect = 4e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| |||||||| || || |||||||||||| || || || |||||| |||||
Sbjct 1160447 TGGAGGGTAGACTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCCTCAAGCTGC 1160506
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| |||||||||||||||| || || || || || ||||| ||| ||||||
Sbjct 1160507 TTCCCGGCGAAGATGAGACGCTGCTGGTCAGGTGGAATCCCTTCCTTATCTTGAATTTTG 1160566
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||| || | || | ||| || |||| |||||||||| || | || || || ||
Sbjct 1160567 GCTTTGACGTTATCAATGGTATCACTGCTTTCGACCTCGAGAGTGATTGTCTTTCCAGTG 1160626
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||||||||||||
Sbjct 1160627 AGGGTCTTAACAAAAATCTGCAT 1160649
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | |||| ||| | |||| || || || ||||||||||||||||| |
Sbjct 1159967 CCTCCACGAAGCCTCAGCACAAGATGGAGAGTGGATTCCTTTTGAATGTTGTAATCAGCC 1160026
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| |||||| ||| || || || ||||| ||| |||| || | |||||| || || ||
Sbjct 1160027 AAAGTGCGGCCATCTTCCAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGTGGG 1160086
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| |||||||| || ||||||| || || | || | |||||| |||| || |||
Sbjct 1160087 ATTCCCTCCTTATCCTGAATTTTTGCCTTGACGTTATCAATGGTGTCGCTGCTTTCCACC 1160146
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || |||| || || || || ||||||||
Sbjct 1160147 TCCAAGGTAATAGTTTTCCCAGTCAAGGTCTTAACGAAGATCTGCAT 1160193
>seq12
Length=31596830
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| ||| | |||||||| || || ||||||||||| | |||||| ||||||
Sbjct 2046807 CACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCAGCGAGAGTGCGGCCATCCTC 2046748
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| | || || ||||||||||||||||| || || ||||| ||
Sbjct 2046747 CAGCTGCTTCCCTGCGAAAATTAGTCGCTGCTGATCGGGAGGAATTCCTTCCTTATCCTG 2046688
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| |||||||| | ||||||||| | ||| | ||| ||
Sbjct 2046687 GATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCTAGGGTTATCGTCTT 2046628
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| || || ||||| || || ||||||||||
Sbjct 2046627 CCCCGTTAGGGTTTTCACGAAGATCTGCATGG 2046596
>seq10
Length=26335333
Score = 129 bits (142), Expect = 5e-25
Identities = 154/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| |||||||| || || ||||| |||||| || |||||| ||| || |
Sbjct 23443480 CAAGATGGAGAGTAGACTCCTTCTGGATGTTATAATCGGCCAAAGTGCGGCCATCTTCAA 23443539
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
||||||| || || |||| | | |||||||| || || || || ||||||||| |
Sbjct 23443540 GCTGTTTACCGGCAAAGATCAATCTTTGCTGATCCGGTGGAATCCCTTCCTTGTCTTGGA 23443599
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || ||| || | |||| ||| || | |||||||||||||| || | || ||||
Sbjct 23443600 TCTTAGCTTTGACGTTGTCGATGGTATCGGAGCTCTCGACCTCGAGAGTAATGGTCTTGC 23443659
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || ||||| || |||||||||||
Sbjct 23443660 CGGTGAGGGTTTTAACGAAAATCTGCAT 23443687
Score = 129 bits (142), Expect = 5e-25
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | |||| |||| ||||| ||| ||||| || || ||||| ||||||
Sbjct 23447036 CCTCCACGAAGCCTCAGAACCAGGTGGAGTGTCGACTCCTTCTGGATGTTATAATCGGCA 23447095
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| || || ||| || ||||||||||| ||| |||| || | ||||||||| || ||
Sbjct 23447096 AGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAGATCAGCCTCTGCTGATCAGGTGGG 23447155
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
||||| ||||||||| || || || || | || | ||||| | ||||| |||
Sbjct 23447156 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTATCAATTGTGTCGGAACTCTCCACC 23447215
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|| | || | || |||||||| || ||||| ||||| ||||||||| ||
Sbjct 23447216 TCAAGAGTGATAGTCTTGCCGGTGAGGGTTTTGACAAAGATCTGCATGCCT 23447266
Score = 122 bits (134), Expect = 8e-23
Identities = 145/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || || ||||||||||| | || | | |||||| ||||| |||||
Sbjct 23442807 GTGGATTCCTTCTGTATGTTGTAATCAGCGAGGGTCCTCCCATCCTCCAGCTGCTTTCCG 23442866
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| ||||||||||| || ||||| ||||| |||||||| || || ||||
Sbjct 23442867 GCAAAGATCAGACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTA 23442926
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||||| | ||| || ||||| | ||| | || ||||||||||| |||
Sbjct 23442927 ACATTGTCGATTGTGTCGGAGCTTTCAACCTCTAGGGTTATGGTCTTGCCGGTCAGGGTT 23442986
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 23442987 TTGACGAAGATCTGCAT 23443003
Score = 122 bits (134), Expect = 8e-23
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| ||| | || || || || |||||
Sbjct 23447288 TGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGCTAGTGTACGGCCGTCTTCAAGCTGC 23447347
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
||||| ||| |||| | | |||||||||||| ||||| || ||||||||| || ||
Sbjct 23447348 TTTCCGGCGAAGATCAACCTCTGCTGATCGGGTGGTATTCCTTCCTTGTCTTGGATCTTG 23447407
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | |||| ||| || | |||||||||||||| || | || || |||||
Sbjct 23447408 GCCTTAACGTTATCGATGGTATCAGAGCTCTCGACCTCGAGTGTAATGGTCTTTCCGGTG 23447467
Query 118716 AGAGTTTTTACAAAAATCTGCATGGCT 118742
|| ||||| ||||| ||||||||| ||
Sbjct 23447468 AGGGTTTTGACAAAGATCTGCATGCCT 23447494
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || || || || || |||||||| ||| | || || || || ||||||
Sbjct 23447516 TGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGCTAGTGTACGGCCGTCTTCAAGCTGT 23447575
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
||||| ||| |||| | | |||||||||||| ||||| || ||||||||| || ||
Sbjct 23447576 TTTCCGGCGAAGATCAACCTCTGCTGATCGGGTGGTATTCCTTCCTTGTCTTGGATCTTG 23447635
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | |||| ||| || | |||||||||||||| || | || || |||||
Sbjct 23447636 GCCTTAACGTTATCGATGGTATCAGAGCTCTCGACCTCGAGAGTAATGGTCTTTCCGGTG 23447695
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
|| ||||| || || ||||||||
Sbjct 23447696 AGGGTTTTCACGAAGATCTGCAT 23447718
Score = 102 bits (112), Expect = 7e-17
Identities = 142/198 (72%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| ||||| |||||||||| | || || | ||||| || || |||||
Sbjct 4732549 GTCGACTCCTTTTGCATGTTGTAATTGGCCAAGGTACAGCCGTCCTCAAGTTGCTTTCCG 4732490
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||||||||||||||| || || || || || || ||||| ||||| |||
Sbjct 4732489 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATTCCTTCTTTGTCCTAGATTTTGGCTTTG 4732430
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGA-CGGTCACCGTTTTGCCGGTCAGAGT 118720
| | |||| |||||| ||| ||||||||| | | | | ||||| || || |||||
Sbjct 4732429 ATGTTGTCGATGGTGTCGCTGCACTCGACCTCAAGAGTTAATGGTTTTTCCAGTGAGAGT 4732370
Query 118721 TTTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 4732369 CTTAACGAAGATCTGCAT 4732352
Score = 100 bits (110), Expect = 2e-16
Identities = 141/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
||||| ||||| |||||||| |||| | || |||| ||||||| || |||||| ||
Sbjct 4732776 GTAGATTCTTTCTGAATGTTATAATTGGCCAATGTGCAGTTATCCTCCAGTTGTTTTTCA 4732717
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| |||| || ||||||| |||| || || | ||||||| ||| || |||
Sbjct 4732716 GCAAAGATCAGCTTTTGCTGATTTTGAGGAATTCCTTTCTTGTCTTGAATCTTAGCCTTA 4732657
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| || |||||| |||||||||| | | ||| | || || |||||| |||
Sbjct 4732656 ACGGTATCATTGGTGTCGTTGCTCTCGACTTTAAGGGTAATAGTCTTTTCGGTCAAGGTT 4732597
Query 118722 TTTACAAAAATCTGCATG 118739
|| |||||||||||||||
Sbjct 4732596 TTCACAAAAATCTGCATG 4732579
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| ||||| | | | ||| | ||||| || ||||| || || || || |||||
Sbjct 23442320 ACCACCGCGAAGACGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATATTATAATCAGC 23442379
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
| || ||| |||||| | || || ||||| | || || | ||||||||| || ||
Sbjct 23442380 AAGTGTACGCCCATCCTCTAATTGCTTCCCAGCAAAAATCAGCCTCTGCTGATCAGGCGG 23442439
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
||| || |||||||| |||||| ||| || | || | || |||| |||||||||
Sbjct 23442440 TATCCCTTCCTTGTCCTGGATTTTTGCTTTGACATTATCAATAGTATCCGAGCTCTCGAC 23442499
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | || | || || ||||||| || || ||||||||||||||
Sbjct 23442500 TTCTAGAGTGATTGTCTTCCCGGTCAAGGTCTTCACAAAAATCTGCAT 23442547
>seq17
Length=27373735
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571
||||| || | || | ||| | ||| | || || || || |||||||||||||| |
Sbjct 16112326 CCTCCCCGAAGCCTGAGCACTAGGTGCAAAGTGGATTCCTTCTGAATGTTGTAATCAGCC 16112267
Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631
| ||| || ||| || ||||| || || ||| |||| || | ||||||||| || ||
Sbjct 16112266 AAAGTCCGGCCATCTTCCAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGATCTGGTGGG 16112207
Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691
|| || |||||||| ||||||| ||||| | || | |||||| ||||||| |||
Sbjct 16112206 ATACCTTCCTTGTCCTGAATTTTTGCCTTAACATTATCAATGGTGTCGCTGCTCTCCACC 16112147
Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| | ||| | ||||| || |||| || || || |||||||||||
Sbjct 16112146 TCCAGGGTAATAGTTTTTCCAGTCAAGGTCTTCACGAAAATCTGCAT 16112100
Score = 123 bits (136), Expect = 2e-23
Identities = 156/212 (74%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCG-CTCATAGTGCGCGTATCCT 118587
||| | ||| | ||||| || || |||||||| |||||| || || ||||| ||||
Sbjct 16112081 CACGAGGTGAAGGGTAGATTCCTTCTGAATGTTATAATCGGCTAAT-GTGCGGCCGTCCT 16112023
Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
| ||||||||||| || |||| || | |||||||| || || || || ||||||||
Sbjct 16112022 CCAGCTGTTTTCCGGCAAAGATAAGCCTTTGCTGATCTGGGGGAATTCCTTCCTTGTCCT 16111963
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
||| || || || | || | |||||| ||||||||||||| | ||| | || |
Sbjct 16111962 GAATCTTAGCCTTGACGTTGTCAATGGTGTCGCTGCTCTCGACCTCAAGGGTAATAGTCT 16111903
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
| ||||||| ||||| ||||| |||||||||
Sbjct 16111902 TTCCGGTCAAGGTTTTCACAAAGATCTGCATG 16111871
Score = 120 bits (132), Expect = 3e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| ||||| ||||||||||| || || || ||||| || ||
Sbjct 16111847 GTGGAGAGTCGACTCCTTTTGGATGTTGTAATCAGCCAAGGTACGGCCGTCCTCAAGTTG 16111788
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||||| || |||||||||||||||| || || || || || || || || |||||
Sbjct 16111787 CTTTCCGGCAAAGATGAGACGCTGCTGGTCTGGTGGGATACCTTCTTTATCCTGGATTTT 16111728
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
||| || | |||| |||||| ||||||||||||||| || | ||||| |||||
Sbjct 16111727 GGCTTTGACGTTGTCGATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTTTTTCCGGT 16111668
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 16111667 GAGGGTCTTAACGAAGATCTGCAT 16111644
>seq5
Length=28438989
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|| ||||||||||| || ||||| || ||||||||||| || | || || |||
Sbjct 727717 CAGCACCAAGTGGAGAGTTGACTCCTTCTGAATGTTGTAGTCTGCAAGGGTCCGTCCATC 727658
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| || |||||||| ||| ||||||| ||||||||||| || || || |||||||||||
Sbjct 727657 TTCCAGTTGTTTTCCTGCGAAGATGAGGCGCTGCTGATCCGGTGGGATTCCCTCCTTGTC 727598
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| || || ||||| | |||| ||||||| | || ||||||| || | ||
Sbjct 727597 TTGGATCTTGGCCTTAACATTGTCGATAGTGTCCGAGGATTCTACCTCGAGAGTTATGGT 727538
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || ||||| || || ||||||||
Sbjct 727537 CTTACCCGTTAGGGTTTTGACGAAGATCTGCAT 727505
>seq13
Length=28119335
Score = 122 bits (134), Expect = 8e-23
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||| || | || ||||| || || ||||||||||| | |||||| |||||
Sbjct 2662417 CACCAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCAGCGAGAGTGCGGCCGTCCTC 2662358
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || ||| |||| || ||||||||||||||||| ||||||||||||||
Sbjct 2662357 CAGCTGCTTCCCGGCGAAGATCAGCCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTG 2662298
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | |||| ||||||| ||| ||||| | ||| | ||| ||
Sbjct 2662297 GATCTTGGCCTTGACATTGTCGATAGTGTCCGAAGACTCAACCTCTAGGGTTATCGTCTT 2662238
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATGG 118740
|| || || ||||| || || ||||||||||
Sbjct 2662237 CCCCGTTAGGGTTTTCACGAAGATCTGCATGG 2662206
>seq4
Length=28735499
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || |||||||| || || ||||| || | ||||| ||||||
Sbjct 24493446 CACCAAGTGGAGGGTGGACTCTTTCTGGATATTGTAGTCTGCAAGTGTGCGGCCATCCTC 24493505
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| |||| | | ||||||||| ||||| || || ||||||||
Sbjct 24493506 AAGCTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGAGGGATCCCTTCCTTGTCCTG 24493565
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|||||| || || | || | ||||||| ||||| ||||| | || | || ||
Sbjct 24493566 AATTTTGGCCTTGACATTGTCAATCGTGTCCGAACTCTCTACCTCCAAAGTAATGGTCTT 24493625
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || ||||||||||||||
Sbjct 24493626 CCCTGTAAGAGTCTTCACAAAAATCTGCAT 24493655
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || || |||||||| | || | |||||| ||||| ||||||
Sbjct 24493003 GTAGACTCCTTCTGGATATTGTAATCAGCAAGGGTCCTTCCATCCTCAAGCTGCTTTCCA 24493062
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| | || | | ||||||||| || || || || |||||||| ||||| ||
Sbjct 24493063 GCGAAAATCAATCTCTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGGATTTTAGCCTTC 24493122
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | || |||| ||||| ||||| | || | || || || || |||||
Sbjct 24493123 ACGTTGTCAATAGTATCCGAACTCTCTACCTCCAAAGTAATGGTCTTCCCAGTAAGAGTC 24493182
Query 118722 TTTACAAAAATCTGCAT 118738
|| ||||||||||||||
Sbjct 24493183 TTCACAAAAATCTGCAT 24493199
>seq1
Length=34959721
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||||| || | || ||||| || ||||||||||| ||| | || || ||
Sbjct 31554298 CAACACCAGATGAAGAGTCGACTCCTTCTGAATGTTGTAGTCGGCAAGGGTCCGGCCGTC 31554357
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
|| || |||||||||||| ||||||| |||||||| || || || ||||||||||||||
Sbjct 31554358 TTCTAGTTGTTTTCCAGCGAAGATGAGGCGCTGCTGGTCCGGTGGAATGCCCTCCTTGTC 31554417
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| || || || || | |||| ||||||| ||| ||||| | || | ||
Sbjct 31554418 TTGGATCTTGGCCTTCACATTGTCGATAGTGTCCGAAGACTCTACCTCTAGAGTTATGGT 31554477
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || ||||| || || ||||||||
Sbjct 31554478 CTTACCCGTTAGGGTTTTGACGAAGATCTGCAT 31554510
>seq7
Length=27069033
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||| || || | |||| |||| || | || ||||| ||||| ||||| |||||
Sbjct 1828845 TACCCCCACGAAGCCTCAGAACCAGATGAAGGGTTGACTCCTTTTGGATGTTATAATCAG 1828904
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| || | |||||| ||||| || ||||| |||| | || || ||||| || |
Sbjct 1828905 CGAGGGTCCTTCCATCCTCCAGCTGCTTCCCAGCAAAGATCAATCGTTGTTGATCTGGTG 1828964
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| || || ||||| ||| ||| || ||| || | |||| || |||| ||| ||||
Sbjct 1828965 GGATACCTTCCTTATCTTGAATCTTGGCTTTGACGTTATCGATTGTATCCGAGCTTTCGA 1829024
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
| || | ||| | ||| || ||||| || ||||||||||| ||||||||
Sbjct 1829025 CTTCCAGGGTTATCGTCTTTCCGGTGAGGGTTTTTACAAAGATCTGCAT 1829073
Score = 104 bits (114), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATC-G 118568
||||||| | |||| | |||| || | ||||| ||||| ||||| ||||| || |
Sbjct 1829301 TACCTCCCCTCAATCGGAGAACCAGATGCAGAGTAGATTCTTTCTGAATATTGTAGTCAG 1829360
Query 118569 CTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGA 118628
|| | || | |||||| | || ||||| || |||| || | |||||| || |||
Sbjct 1829361 CTAAG-GTCCTTCCATCCTCCAATTGCTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGA 1829419
Query 118629 GGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688
|| || || ||||| ||| || || ||||| | || | ||||| | |||||||
Sbjct 1829420 GGAATCCCTTCCTTATCTTGGATCTTGGCCTTAACGTTGTCAATTGTGTCAGAGCTCTCG 1829479
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||||| | || | || |||||||| ||||| || ||||| |||||||||
Sbjct 1829480 ACCTCAAGAGTTATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCATG 1829530
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || ||||| || || || || || || || ||||| || ||
Sbjct 1829561 GTAGACTCCTTCTGGATGTTATAGTCAGCCAGGGTACGGCCGTCTTCAAGCTGCTTGCCG 1829620
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| | | ||| || ||||| || || |||||||| ||| ||| || ||
Sbjct 1829621 GCGAAGATCAACCTCTGTTGGTCGGGGGGAATTCCCTCCTTATCTTGAATCTTGGCCTTG 1829680
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| || || | |||||||||||||| || | || ||||| || || ||
Sbjct 1829681 ACATTATCGATTGTATCGGAGCTCTCGACCTCGAGAGTTATGGTCTTGCCTGTGAGGGTC 1829740
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || ||||||||
Sbjct 1829741 TTGACGAAGATCTGCAT 1829757
>seq11
Length=27369018
Score = 105 bits (116), Expect = 6e-18
Identities = 150/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || ||||||||||| || | || || ||||||
Sbjct 5723889 CACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCTGCAAGTGTACGGCCATCCTC 5723830
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| |||| | | |||||| || || || |||||||||||||||
Sbjct 5723829 CAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 5723770
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| ||| || || | || | || || | || || ||||| | ||| | |||||
Sbjct 5723769 GATCTTTGCCTTGACATTGTCAATAGTATCAGAACTTTCAACCTCCAGGGTAATTGTTTT 5723710
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || || || ||||| |||||||||
Sbjct 5723709 ACCCGTTAGGGTCTTCACAAATATCTGCATG 5723679
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
|||||| || | || ||||| |||||||| ||||| || | ||||| ||||||
Sbjct 5723205 CACCAAATGAAGGGTGGACTCCTTTTGAATATTGTAGTCAGCAAGGGTGCGGCCATCCTC 5723146
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| |||| || | |||||| || || || || || || |||||
Sbjct 5723145 TAGCTGCTTACCAGCAAAGATCAGCCTCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTG 5723086
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
|| || || || | || | |||||| | || || ||||| | || | || ||
Sbjct 5723085 GATCTTAGCCTTTACATTGTCAATGGTGTCTGAACTTTCCACCTCCAAAGTGATTGTCTT 5723026
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| |||||||||||||| ||||||||
Sbjct 5723025 GCCGGTGAGAGTTTTTACAAAGATCTGCAT 5722996
Score = 102 bits (112), Expect = 7e-17
Identities = 143/201 (71%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|||||||| || || || |||||||| | || | | |||||||||||||||||||
Sbjct 5724104 GTAGACTCCTTCTGGATATTGTAATCAGCAAGTGTCCTCCCATCCTCGAGCTGTTTTCCA 5724045
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | || | | ||||||||| || || ||||| |||||||| ||||| ||
Sbjct 5724044 GCAAATATCAATCTCTGCTGATCTGGTGGGATGCCTTCCTTGTCCTGGATTTTAGCCTTC 5723985
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | || | || || | ||||| ||||| | ||| | || || ||||| || ||
Sbjct 5723984 ACATTGTCAATAGTATCTGAACTCTCTACCTCCAAGGTAATGGTCTTCCCGGTAAGGGTC 5723925
Query 118722 TTTACAAAAATCTGCATGGCT 118742
|| ||||| ||||||||| ||
Sbjct 5723924 TTCACAAAGATCTGCATGCCT 5723904
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||||| || ||||| || ||||||||||| || | || || ||||||
Sbjct 5723661 CACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCTGCAAGTGTACGGCCATCCTC 5723602
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || ||||| |||| | | |||||| || || || || |||||||||||
Sbjct 5723601 CAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTG 5723542
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| || || || | || | ||||| | ||| || || || | || | || ||
Sbjct 5723541 AATCTTGGCCTTGACATTGTCAATAGTGTCGGAGCTTTCCACTTCCAATGTGATTGTCTT 5723482
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
||| || || || || ||||| || ||||||
Sbjct 5723481 GCCAGTGAGGGTCTTCACAAAGATTTGCATG 5723451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433819724925148
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |