Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq11 95.1 1e-14 seq4 89.7 4e-13 >seq11 Length=27369018 Score = 95.1 bits (104), Expect = 1e-14 Identities = 82/102 (80%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || |||||||||||||| ||||| ||||| ||||| |||||||| || ||||| Sbjct 11623498 GAGTTATCCTGTCAAATGTATCAGCGATCTGCTGACATGGGCCTGGGTGTGCCATTCAAC 11623439 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 |||||| |||||| || | || | |||||||| |||||| Sbjct 11623438 ATTGCATCTTATGCCCTCTTGACATGCATGATTGCTCATGTT 11623397 >seq4 Length=28735499 Score = 89.7 bits (98), Expect = 4e-13 Identities = 81/102 (79%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || |||||||||||||||||||| ||||||||||| |||||||| || ||||| Sbjct 20903010 GAGTTATCTTGTCAAATGTATCAACGATCTGCTGATATGGGCCTGGGTGTGCCATTCAAA 20902951 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTT 20553 | ||| |||||| || | || | || ||||| |||||| Sbjct 20902950 GTCGCATCTTATGCCCTCTTGACATGCATAATTGCTCATGTT 20902909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399174177453955