Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2 116 8e-21 >seq2 Length=32417782 Score = 116 bits (128), Expect = 8e-21 Identities = 172/244 (70%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 248778 CCTCCTGGACGGCGCGATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAA 248837 ||| || ||| | | ||| ||| | || |||||| || || |||| ||||| ||||| Sbjct 14719920 CCTTCTAGACAGTGAGATCATCTATGACAGAGATTTTGACTATGATTACTTTGGCTTCAA 14719979 Query 248838 AACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCA 248897 ||| || |||| || || || | || ||||||| || || |||||| || ||||| Sbjct 14719980 AACTCTTGAGAGGTCCTACCTTTTAAAGGTTGATGGGAAAATTGTGGAAAGACCACAGCA 14720039 Query 248898 CATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGAC 248957 |||||||||| | || |||||||| |||||||| || ||||| || | || | || Sbjct 14720040 CATGTTGATGAGGGTTGCTGTCGGTATTCACAAAGAGGACATTGACTCTGCTGTCAAAAC 14720099 Query 248958 GTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGG 249017 ||| | ||| | | |||||| | | |||||| || || || || ||||| || || Sbjct 14720100 ATACCACTTGATGTCTCAGCGCTGGTTCATACATGCAACCCCTACTCTTTTCAATGCTGG 14720159 Query 249018 TACC 249021 ||| Sbjct 14720160 AACC 14720163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073738623340992