Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq11 86.0 6e-12 >seq11 Length=27369018 Score = 86.0 bits (94), Expect = 6e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 20245 AACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAA 20304 ||||||||||| ||| | || ||||||| ||| |||||||| || || || |||| Sbjct 11623397 AACATGAGCAATCATGCATGTCAAGAGGGCATAAGATGCAATGTTGAATGGCACACCCAG 11623456 Query 20305 ACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAA 20364 |||||||| | || | |||||||| |||||||| | ||| |||| |||||||| || Sbjct 11623457 GCCCATGTCAGCAGATCGCTGATACATTTGACAGGATAACTCCCCGTTGGCTACATAGAA 11623516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441361660853960