Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq17 123 3e-23 >seq17 Length=27373735 Score = 123 bits (136), Expect = 3e-23 Identities = 140/185 (76%), Gaps = 6/185 (3%) Strand=Plus/Plus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAA---GCAAAGTCCAGGCATGAGTCCTCTT 119570 |||||||| |||||||| | ||| || |||| | || ||||||||||||||| | Sbjct 24447999 CCTTCATCTCGAGAGATCAACTCGTT--TGAAAATGTTAA-TCCAGGCATGAGTCCCCGC 24448055 Query 119571 TTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCG 119630 |||||||||||||| || || || || |||||||| || || || |||||||||||||| Sbjct 24448056 TTCTTTAGCCAAAATATTGCGCAGAAGCTTCCAGAGAAAAATATCCCCTCCACACAGGCA 24448115 Query 119631 AAAGCGAATAGACGCTCAGCAAAAGGTCGAGACTTGTCGAACCACTTGAGAGCCCAGTTG 119690 ||||||| || | |||||| |||| || || | |||| |||||||||| | Sbjct 24448116 AAAGCGATCAGCCTCTCAGCGAAAGTCTCCGAACCATCAATCCACCTGAGAGCCCACTCA 24448175 Query 119691 GCCTT 119695 ||||| Sbjct 24448176 GCCTT 24448180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588961135718200