Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 3e-15 seq10 84.2 2e-11 >seq2 Length=32417782 Score = 96.9 bits (106), Expect = 3e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 |||||||||||||| || ||||| || ||||||||||||||| || ||| |||| ||| Sbjct 15025611 GATCAACAGAGACTGATTTTTGCTGGAAAACAATTGGAAGATGGTAGAACATTGGCTGAT 15025552 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAG 28768 || ||||| ||||| || || ||||| ||| |||| || || Sbjct 15025551 TACAACATCCAAAAGGAGTCGACTCTTCACCTGGTTTTGAG 15025511 >seq10 Length=26335333 Score = 84.2 bits (92), Expect = 2e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 28627 ATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCT 28686 || ||||| ||||||| |||||||||||| | || |||||||||||| || |||| Sbjct 23446961 ATGTCAAGGCAAAAATCCAGGACAAAGAGGGAATTCCACCAGATCAACAGAGGCTGATCT 23446902 Query 28687 TTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAACATTCAAAAAGAAT 28746 |||| || || |||||||||||| || | || ||||| || || || || || | Sbjct 23446901 TTGCAGGGAAGCAATTGGAAGATGGGCGTACGCTTGCTGATTACAATATCCAGAAGGAGT 23446842 Query 28747 CTACTCTGCAC 28757 | ||||| ||| Sbjct 23446841 CCACTCTTCAC 23446831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425394332250201