Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq17 118 2e-20 >seq17 Length=27373735 Score = 118 bits (130), Expect = 2e-20 Identities = 177/249 (71%), Gaps = 2/249 (1%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | ||| || || |||||||| || ||||| || || || ||| || || || Sbjct 24448323 GCCTCAGCTACCTGAACTTCCTTCATAAAACGGCCAGCGAGATTTTCAAGAACTATACCA 24448382 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || ||| || || ||||| || || || |||||||||| ||| ||| | || Sbjct 24448383 TCAGAGGCAGCAAAGAAGGCAAGAACATGGGTGATAAAGTGCTTCTCATCGGAAGTTAGG 24448442 Query 796270 GAGACCCAGTGGACCGTG-TCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGC 796328 | |||| ||| | | | || ||| |||||||||||||| ||||||||||| || Sbjct 24448443 GTTTCCCAATGG-CGGAGATCTTGAGAGAGATCGACCTCCTCGGCAGTCCAAAAGGATGC 24448501 Query 796329 CTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCG 796388 |||||| || ||||||||||||||||| || | || | || ||||||| | || || Sbjct 24448502 CTCGGCTTTCTTGTACATCTCCCATATTTGTGGATATTGAATTGGGAACATACAGAAACG 24448561 Query 796389 ATTGGGGTT 796397 || ||||| Sbjct 24448562 ATCTGGGTT 24448570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916031629761341