Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1 93.3 1e-13 >seq1 Length=34959721 Score = 93.3 bits (102), Expect = 1e-13 Identities = 132/182 (73%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 305309 CATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCT 305368 ||||||||||| ||| | || || |||||| | ||||| || || |||||||| Sbjct 26093263 CATTTGAATGATGGTGACTTTGTGCTCTTCAATCGACAACCCAGTCTCCACAAAATGTCA 26093322 Query 305369 ATGATGGCTCATAAAGTCAAAGTATTAT-CTGGATTGACATTTC-GATTAAATGTAAGTG 305426 || |||| |||| | | ||| ||||| | ||| | |||| | ||||| | || Sbjct 26093323 ATTATGGGACATAGAATAAAA--ATTATGCCATATTCAACTTTCCGCTTAAACTTGTCTG 26093380 Query 305427 CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCAAT 305486 | | | || |||||||| ||||||||||| ||||||||||| |||||||| || |||| Sbjct 26093381 TTACTTCACCATATAATGCTGATTTTGATGGCGATGAAATGAACATGCATGTTCCGCAAT 26093440 Query 305487 CA 305488 || Sbjct 26093441 CA 26093442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186782099007259