Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq17 84.2 2e-11 >seq17 Length=27373735 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||| || || |||||| || || || || || |||| | Sbjct 16111837 GACTCCTTTTGGATGTTGTAATCAGCCAAGGTACGGCCGTCCTCAAGTTGCTTTCCGGCA 16111778 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || || ||||||||||| ||||| ||| | Sbjct 16111777 AAGATGAGACGCTGCTGGTCTGGTGGGATACCTTCTTTATCCTGGATTTTGGCTTTGACG 16111718 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||| || |||| || | ||||| || || || || || Sbjct 16111717 TTGTCGATGGTGTCGCTGCTCTCGACCTCGAGAGTGATGGTTTTTCCGGTGAGGGTCTTA 16111658 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 16111657 ACGAAGATCTGCAT 16111644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476599171524840