Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manihot_20esculenta_20[genbank_20GCA_5F001659605.1_202016-06-10] 2,019 sequences; 582,117,524 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=32417782 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 ||||| |||||| | || ||||||||| || || |||| ||| || |||||||| ||| Sbjct 15025632 GACAAGGAAGGCATTCCTCCTGATCAACAGAGACTGATTTTTGCTGGAAAACAATTGGAA 15025573 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| || ||| ||| ||||||||||| ||||| || || || || || | || ||| Sbjct 15025572 GATGGTAGAACATTGGCTGATTACAACATCCAAAAGGAGTCGACTCTTCACCTGGTTTTG 15025513 Query 106473 AGGTTACGAGGAGGA 106487 ||| | | |||||| Sbjct 15025512 AGGCTTAGGGGAGGA 15025498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402319700051552