Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq979 208 6e-49 seq8 113 4e-20 seq6 113 4e-20 seq7 104 2e-17 seq4 104 2e-17 seq5 91.5 1e-13 seq1 87.8 2e-12 >seq979 Length=3763 Score = 208 bits (230), Expect = 6e-49 Identities = 435/641 (68%), Gaps = 8/641 (1%) Strand=Plus/Plus Query 102125 GCCGTGCCCGAGAAATATTTGTCGCCGGCGTAGCCTGACACGCCCGTCCACCCGCGGCCG 102184 || ||||| | ||| ||| || ||| ||||| |||||||| |||| |||||| || Sbjct 752 GCGGTGCCGGTGAACGGATTGCCGTCGGTATAGCCCGACACGCCGTTCCAGCCGCGGGCG 811 Query 102185 TACATGGCGACGCCCACGATGAGTTTGTGGGCCGCTACGCCTTGGCCCGTGAGCAACTTC 102244 || || |||| |||| ||| || | | | ||||| || | ||| ||| Sbjct 812 TATGCCGCCGCGCCGACGACGAGCTTCTTCGGATCGACGCCCTGCGCAAGCAGCGCCTTG 871 Query 102245 ACGGCGTGGTCGGTGGTGTACAGCTCGTTGGCGTTCCAACTGGGCGCGTACAGCGTGGTC 102304 | | || |||||| |||||| || | ||||| |||||||| ||||| ||| Sbjct 872 ATCGAGTTGTCGGTCGTGTACTTGGTGTCCGGTTTCCACGCGGGCGCGTGCAGCGCCGTC 931 Query 102305 TGGTAGCCCAAATCCGTGTTGGACCACGCGCCCTTAAAATCGTAACTCATGAGGAATATT 102364 |||| |||| ||||| | |||| || | | ||||| ||||| ||| || Sbjct 932 TGGTGACCCAGCTCCGTCAGGCTGAACGCACCGTAGTAGTCGTACGTCATGTCGAAGATG 991 Query 102365 TTATCAAGGAACCTTTGAGCCGCGTCGTACTTCACCACGGCAATTTTGTCGTAGCCCGAA 102424 | || | | || | || | | ||| ||||||||| | || ||||| | ||||| Sbjct 992 TAGTCCATGTACTTCGTGGCTTCCTTGTAGTTCACCACGTCGATCTTGTCCTTGCCCGCG 1051 Query 102425 CTAATCGCGCTCGTCAGCTCGTACGTCTTGTTCGTTTGCAGCTGCAGTTCGTCCAGCATG 102484 | ||||| |||||||||||| |||||| || | | | || ||| ||||| Sbjct 1052 CCGATCGCCGACGTCAGCTCGTAGGTCTTGCCGGTGTCCGCCGACACGCGGTCGAGCATC 1111 Query 102485 GCGCGCAACTCTTTCAGCAAAACAAGGTACGTGTCGGCGTCGCGCTCGCCG-TTGCCGAG 102543 |||| || |||| || | ||| || |||| || || | ||||||| Sbjct 1112 TGCCGCAGTTCCTTCATCAGCGTCACATACAGCGCGCCGTCCGTCT-GCGGATTGCCGAT 1170 Query 102544 CGCCGGGTTGGCGCCCTTGCCGCCCGGAAACTCCCAATCGATGTCCACCCCGTCGAAAAA 102603 ||| ||| ||||||||||||||||| || ||||| |||||||| || |||||||| || Sbjct 1171 CGCGCCGTTCGCGCCCTTGCCGCCCGGGAATTCCCAGTCGATGTCGACACCGTCGAAGAA 1230 Query 102604 CTTCCACACCTGCAAAAACTCTTTAACGGATTCGACAAACACGCGCCGCTTGTCCGCGTC 102663 |||||| ||| |||| | || ||||| ||||| |||||| ||| ||| Sbjct 1231 CTTCCAGGTGCGCAGCAACTGCTCGGTCGAATCGACGAACACCTTGCGCTTGGCCGGGTC 1290 Query 102664 GTGCA--TGAAATAGAACGGGTCGGACAGCGTCCAGCCGCCAATGGACGGCAGGATTTTC 102721 ||||| || || |||||| |||||||||||||||||||| || ||||||||||| || Sbjct 1291 GTGCAGCTGGAA--GAACGGATCGGACAGCGTCCAGCCGCCGATCGACGGCAGGATCTTG 1348 Query 102722 AAATGCGGGTTTGC-CAGCTTGGCCGCCATCAACTGGCCAA 102761 | | |||| |||| | ||| || ||||||| |||||||| Sbjct 1349 AGGT-CGGGATTGCGCTTCTTCGCGGCCATCATCTGGCCAA 1388 >seq8 Length=45569985 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | |||||| |||||||| |||||||| || || Sbjct 6167939 CCACCACGGAGACGGAGCACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCA 6167880 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| ||||| ||| |||| |||| ||||||||| || Sbjct 6167879 AGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGG 6167820 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || ||| || || | | | | ||||| ||| | Sbjct 6167819 ATTCCTTCCTTGTCTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 6167760 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || || || |||||||| Sbjct 6167759 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 6167713 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | || ||||||||||| |||||||| ||||| Sbjct 35000596 CCACCACGGAGACGGAGCACCAAATGAAGGGTAGACTCCTTTTGGATGTTATAATCCGCA 35000655 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | |||||||| |||||||| ||| |||| || | |||||| || || Sbjct 35000656 AGGGTACGCCCATCCTCCAGTTGTTTGCCAGCAAAAATGAGACGCTGCTGATCAGGTGGG 35000715 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| || || | | | | ||||| ||| | Sbjct 35000716 ATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 35000775 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || || || |||||||| Sbjct 35000776 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCAT 35000822 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||| | ||| | ||| |||||||| || ||||| || || |||| |||| | | || || Sbjct 6168150 CACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTTCTGCCATCTTC 6168091 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 |||||||| || ||| | || || ||||||||||| || | || || ||||| Sbjct 6168090 AAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTGTCTTG 6168031 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 ||||| || || | | | | |||||| | |||| || | |||||| ||||| Sbjct 6168030 TATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTAATCGTCTT 6167971 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | || || |||||||||||||| Sbjct 6167970 TCCAGTGAGAGTCTTCACAAATATTTGCAT 6167941 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||| | || |||||||| || ||||| || || || Sbjct 33775198 CCACCACGTAGACGGAGGACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCA 33775139 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || ||||||| ||||| || || || | || | ||||||||||||| ||| Sbjct 33775138 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCAGGGGA 33775079 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||| || |||||| ||| || | | ||| || || | || Sbjct 33775078 ATTCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACC 33775019 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||||||||||| | || || || || || ||||| Sbjct 33775018 TCAAGGGTGGTGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCAT 33774972 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||| | ||| | ||| ||||| || ||||||||||| || |||| |||| | | || || Sbjct 35000385 CACAAGATGGAGAGTTGACTCTTTCTGAATGTTATAATCAGCCAAGGTTCTGCCATCTTC 35000444 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 |||||||| || ||| | || || |||||||| || || | || || ||||| Sbjct 35000445 AAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATACCCTCTTTGTCTTG 35000504 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 ||||| || || | | | | || ||| | |||| || | |||||| ||||| Sbjct 35000505 TATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCAAGGGTAATTGTCTT 35000564 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | || || |||||||||||||| Sbjct 35000565 TCCTGTGAGAGTCTTCACAAATATTTGCAT 35000594 >seq6 Length=35275713 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | |||||||||||||| ||||| || || || Sbjct 24039310 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCA 24039251 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| ||||| ||| |||| || | ||||||||| || Sbjct 24039250 AGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGG 24039191 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || ||| || || | | | | ||||| ||| | Sbjct 24039190 ATTCCTTCCTTGTCTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 24039131 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || ||||| ||||||||||| Sbjct 24039130 TCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACGAATATTTGCAT 24039084 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 20978 AGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCC 21037 ||| ||||| ||||| ||||| || || || || ||| | | || || ||||| || || Sbjct 24039509 AGTTGACTCTTTTTGGATGTTGTAATCGGCAAGAGTTCTGCCATCTTCAAGCTGCTTTCC 24039450 Query 21038 CGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTT 21097 ||| |||| || ||||||||||| ||| | || |||||||| ||||| ||| Sbjct 24039449 AGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGAATCTTGGCTTT 24039390 Query 21098 CACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGT 21157 || | | | ||||||| | |||| || | ||| || ||||| || || | || Sbjct 24039389 GACATTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCAGTGAGAGT 24039330 Query 21158 TTTGACAAATATTTGCAT 21175 ||||| || |||||||| Sbjct 24039329 CTTGACGAAGATTTGCAT 24039312 >seq7 Length=49172423 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| || | |||||||||||||| ||||| || || || Sbjct 47989848 CCACCACGAAGACGGAGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCTGCA 47989789 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | |||| |||||||| ||||| ||| |||| || | ||||||||| || Sbjct 47989788 AGGGTACGCCCGTCTTCCAGCTGCTTGCCGGCAAAAATTAGACGCTGCTGGTCTGGAGGG 47989729 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| ||||| || || | | | | ||||| | |||| Sbjct 47989728 ATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCCACC 47989669 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || || | || || ||||| |||||||| Sbjct 47989668 TCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 47989622 >seq4 Length=56582383 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||||| || || || || ||||| || || || ||||| || | | ||| Sbjct 31259585 AGAACAAGATGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAGAGTACGACCATCC 31259644 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| ||| ||||| ||| ||||||| |||||||| || ||| | || ||||| || Sbjct 31259645 TCCAACTGCTTGCCAGCAAAAATAAGCCTCTGCTGATCTGGGGGAATACCCTCCTTATCT 31259704 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 |||||| |||||| | | | ||||||| | ||| |||| |||||| ||| Sbjct 31259705 TGTATCTTTGCTTTCACATTATCAATAGTATCAGAGCTTTCCACCTCCAAGGTAATAGTC 31259764 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | || || |||||||||||||| Sbjct 31259765 TTCCCAGTAAGTGTCTTCACAAATATTTGCAT 31259796 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | |||||||||||||| |||||||| || || Sbjct 35111143 CCACCACGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCA 35111202 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | ||||||||||| ||||| ||| |||| || | ||||||||| || Sbjct 35111203 AGGGTACGCCTATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGG 35111262 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| ||||| || || | | | | ||||| | |||| Sbjct 35111263 ATCCCTTCTTTGTCTTGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCCACC 35111322 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| || ||||| || || | || || ||||| |||||||| Sbjct 35111323 TCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 35111369 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || ||||| ||||| | |||| ||||| ||| || || || || || ||||| || ||| Sbjct 31287077 CCACCTCGAAGCCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATATTATAATCAGCC 31287136 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | || |||| ||| |||||||| |||| || ||||||||||| || Sbjct 31287137 AGAGTACGGCCATCTTCCAACTGCTTGCCCGCGAAAATTAGCCTCTGCTGGTCTGGAGGA 31287196 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || ||||| |||||| |||||| | | | | |||||| || Sbjct 31287197 ATGCCCTCTTTGTCCTGAATCTTTGCTTTCACGTTGTCAATTGTATCAGAACTTTCAACC 31287256 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| ||||| | || || ||||| || ||||| Sbjct 31287257 TCCAAAGTTATTGTCTTTCCGGTAAGAGTCTTCACAAAAATCTGCAT 31287303 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | ||||| |||||||| |||||||| || || Sbjct 35101802 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCA 35101861 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||| ||| ||||| ||| |||| || | ||||||||| || Sbjct 35101862 AGGGTACGCCCATCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 35101921 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| || ||| || || | | | | ||||| ||| | Sbjct 35101922 ATTCCTTCCTTGTCTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 35101981 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || ||||||||||| || | || || || || |||||||| Sbjct 35101982 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 35102028 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | |||||||| ||| | ||||||||||| || |||||||| || || Sbjct 36294097 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCA 36294038 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | | ||||||||||| || || ||| |||| || | ||||||||| || Sbjct 36294037 AGGGTACGCCCATCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGG 36293978 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||||| |||||| || || | | | | ||||| ||| | Sbjct 36293977 ATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 36293918 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| || || | || || || || |||||||| Sbjct 36293917 TCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 36293871 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||| | |||| ||||| |||||| |||||||| || ||||| || || Sbjct 31287533 CCACCACGAAGCCGCAAAACCAAATGCAGAGTGGATTCCTTTTGGATATTATAATCAGCA 31287592 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| | || || || ||||| || ||| | |||||||||||||| || || Sbjct 31287593 AGGGTCCTTCCATCTTCAAGTTGTTTCCCTGCAAAGATAAGTCTCTGCTGATCAGGAGGG 31287652 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||||||| || ||||| |||||| | | | |||||| ||| Sbjct 31287653 ATGCCTTCCTTATCCTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACC 31287712 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| ||||| || || ||||| | || || ||||| |||||||| Sbjct 31287713 TCCAAAGTAATAGTTTTTCCGGTAAGGGTCTTTACAAAAATTTGCAT 31287759 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 ||||| |||||||| ||||| || ||||| ||||| || | || |||| ||||| || Sbjct 31288247 GTGGATTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGGCCATCTTCCAATTGTTTACCA 31288306 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 ||| | ||||| || ||||| || || | ||||||||||| ||||| ||| Sbjct 31288307 GCAAATATAAGCCTTTGCTGATCGGGAGGAATACCTTCCTTGTCTTGAATCTTAGCTTTA 31288366 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | | | |||||| |||| || | ||| || || ||||| || || ||| Sbjct 31288367 ACGTTGTCTATGGTATCAGAACTCTCCACCTCGAGGGTGATAGTTTTGCCAGTCAATGTT 31288426 Query 21159 TTGACAAATATTTGCAT 21175 || ||||| |||||||| Sbjct 31288427 TTCACAAAGATTTGCAT 31288443 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||| | ||| | ||| |||||||| || ||||| ||||| |||| |||| | | || || Sbjct 36294308 CACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTGCCATCTTC 36294249 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 |||||||| || ||| | || || ||||||||||| || | ||||| ||||| Sbjct 36294248 AAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTG 36294189 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 ||||| || || | | | | |||||| | |||| || | ||| || ||||| Sbjct 36294188 TATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTT 36294129 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | || || |||||||||||||| Sbjct 36294128 TCCAGTGAGAGTCTTCACAAATATTTGCAT 36294099 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||||| || || || || ||||| || || || |||| || | | ||| Sbjct 31286864 AGAACAAGATGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACCATCC 31286923 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 |||| ||| ||||| ||| ||||||| || |||||||| || | || ||||| || Sbjct 31286924 TCCAACTGCTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGAATACCCTCCTTATCC 31286983 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||| |||||| | | | |||||| | ||| |||| |||||| ||| Sbjct 31286984 TGTATCTTCGCTTTCACGTTATCAATCGTATCAGAGCTTTCCACCTCCAAGGTAATAGTC 31287043 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || ||||| | || || |||||||||||||| Sbjct 31287044 TTCCCGGTAAGAGTCTTCACAAATATTTGCAT 31287075 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 ||||| || ||||| | |||| ||| | |||||||||||| || |||||||| || || Sbjct 31260026 CCCCCACGAAGCCTCAAAACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAATCGGCA 31260085 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | || || ||||| || || ||| | ||||| ||||| || || || Sbjct 31260086 AGTGTCCTTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCAGGAGGG 31260145 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||| |||||| | | | |||||| ||| Sbjct 31260146 ATACCCTCCTTATCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACC 31260205 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||| || || || ||||| || || ||||| ||||||||| Sbjct 31260206 TCCAAAGTAATAGTTTTTCCAGTTAAAGTCTTAACAAAAATTTGCATT 31260253 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || ||||| | |||| ||||||||| || ||||| || || ||||| || ||| Sbjct 31259798 CCACCACGAAGCCTCAAAACCAAATGCAAAGTAGATTCCTTCTGGATATTATAATCGGCC 31259857 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||||| ||| || || ||| |||| |||||||||||||| || Sbjct 31259858 AAAGTACGACCATCCTCCAACTGCTTTCCAGCAAAAATTAGTCTCTGCTGGTCAGGAGGA 31259917 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| || || || || ||| ||||| | | | |||||| ||| Sbjct 31259918 ATGCCCTCTTTATCCTGAATTTTTGCCTTCACATTATCAATTGTATCAGAACTCTCAACC 31259977 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || |||||||| || || | || || ||||| || ||||| Sbjct 31259978 TCCAAAGTTATGGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCAT 31260024 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| || || ||||||| ||| | |||||||||||||||||||| || || Sbjct 31306224 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCGC 31306283 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || || | |||| |||| || || || || | ||||| || || || || | Sbjct 31306284 CAAGTGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTTTGTTGATCGGGAG 31306343 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | || |||||||| ||||| |||||| | | | |||||| ||| Sbjct 31306344 GGATACCCTCCTTGTCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAA 31306403 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||| ||||| || || || || || |||||||| |||||| Sbjct 31306404 CCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTAACAAATATCTGCATT 31306453 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || |||| | |||| ||| | |||||||||||||||||||| || || || Sbjct 31287761 CCACCACGAAGCCGCAAAACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCG 31287820 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || | |||| |||| || || || || | ||||| |||||||| || || Sbjct 31287821 AGCGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGAGGG 31287880 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || ||||| || ||||| |||||| | | | |||||| |||| Sbjct 31287881 ATACCCTCCTTATCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCCACC 31287940 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| ||||| ||||| || || || || || ||||| || |||||| Sbjct 31287941 TCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCATT 31287988 >seq5 Length=43630510 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | || | |||||| ||||| || ||||| ||||| || Sbjct 14677268 CCACCACGGAGACGGAGAACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCG 14677209 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || |||| ||||||||||| || || | || || | || |||||| || Sbjct 14677208 AGAGTGCGGCCGTCTTCCAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCCGGTGGG 14677149 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| ||||| |||||| |||||| | | ||| || || | || | Sbjct 14677148 ATTCCTTCTTTGTCTTGGATCTTGGCTTTCACATTGTCGATGGTGTCTGAAGATTCAACT 14677089 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178 || | ||| || ||||| ||||||| ||||| || || || ||||| || Sbjct 14677088 TCGAGGGTTATTGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATCTT 14677039 >seq1 Length=52991155 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTC-CTTT-TGAATGTTATAGTCCG 21006 || || |||| ||| || || | ||| ||| | |||| |||| || || ||||| |||| Sbjct 28610818 CCACCGCGCAACCTCAGAACTAGATG--AAGCGTACTCTCTTTCTGGATATTATAATCCG 28610761 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 | || ||| | || |||| ||| || || ||| | || | || ||||| ||| | Sbjct 28610760 CAAGAGTTCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAATCGTTGCTGATCCGGTG 28610701 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | |||||||||||| ||||| ||||| | | ||| || ||| | || Sbjct 28610700 GAATGCCTTCCTTGTCTTGAATCTTCGCCTTCACGTTGTCGATTGTGTCAGAAGATTCAA 28610641 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| ||| ||||| || || |||| ||||||||||| |||||||| Sbjct 28610640 CTTCCAGGGTTATGGTTTTCCCTGTTAGGGTTTTGACAAAGATTTGCAT 28610592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422247945076892