Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq4 163 4e-35 seq8 125 1e-23 seq6 102 1e-16 seq1 102 1e-16 >seq4 Length=56582383 Score = 163 bits (180), Expect = 4e-35 Identities = 181/239 (76%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| ||||||| || || || |||||||| ||| | ||| |||| || | Sbjct 31287759 ATGCAAATTTTTGTAAAGACCCTTACCGGAAAAACTATTACTTTGGAGGTTGAGAGTTCA 31287700 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| | ||| || ||||| ||||| ||||| || || |||||||| Sbjct 31287699 -GATACTATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGCATCCCTCCTGATCA 31287641 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || || ||||| |||||||| |||||| | || ||| | | || | | |||||||| Sbjct 31287640 GCAGAGACTTATCTTTGCAGGGAAACAACTTGAAGATGGAAGGACCCTTGCTGATTATAA 31287581 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 ||| ||||| ||||| ||| ||||||||||||| || | || |||||||| ||| || Sbjct 31287580 TATCCAAAAGGAATCCACTCTGCATTTGGTTTTGCGGCTTCGTGGTGGTATGCAAATTT 31287522 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || |||||| | ||| |||| | Sbjct 31260024 ATGCAGATTTTTGTTAAGACCCTTACTGGAAAGACCATAACTTTGGAGGTTGAGAGTTCT 31259965 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| |||| | || |||||||| |||||||| || || || ||||| || Sbjct 31259964 GATACAATTGATAATGTGAAGGCAAAAATTCAGGATAAAGAGGGCATTCCTCCTGACCAG 31259905 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || || || |||||||| ||||| || || |||||| |||| || || | ||||||||| Sbjct 31259904 CAGAGACTAATTTTTGCTGGAAAGCAGTTGGAGGATGGTCGTACTTTGGCCGATTATAAT 31259845 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || ||||| ||||||||||||||||| | | || ||||| || Sbjct 31259844 ATCCAGAAGGAATCTACTTTGCATTTGGTTTTGAGGCTTCGTGGTGGCAT 31259795 Score = 152 bits (168), Expect = 8e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | |||||||| || || || ||||| || | ||| | ||| | Sbjct 31259796 ATGCAAATATTTGTGAAGACACTTACTGGGAAGACTATTACCTTGGAGGTGGAAAGCTCT 31259737 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| | ||| || || |||||||| || ||||| || || ||||| Sbjct 31259736 GATACTATTGATAATGTGAAAGCAAAGATACAAGATAAGGAGGGTATTCCCCCAGATCAG 31259677 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||||||||| || || || || |||||| |||| || | | |||||| ||| Sbjct 31259676 CAGAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTCTGGCAGATTACAAT 31259617 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| |||||||| || ||||| | ||| | ||| | || ||||| Sbjct 31259616 ATTCAGAAAGAATCTACCCTGCATCTTGTTCTTCGTCTCCGTGGTGG 31259570 Score = 149 bits (164), Expect = 9e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | ||||| || || || || ||||| || | ||| | ||| | Sbjct 31287075 ATGCAAATATTTGTGAAGACTCTTACCGGGAAGACTATTACCTTGGAGGTGGAAAGCTCT 31287016 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | ||| ||| || || ||||| || ||||| ||||| || || Sbjct 31287015 GATACGATTGATAACGTGAAAGCGAAGATACAGGATAAGGAGGGTATTCCACCAGACCAG 31286956 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||||||||| || || || || |||||| |||| || || | |||||| ||| Sbjct 31286955 CAAAGGCTTATTTTTGCTGGCAAGCAGTTGGAGGATGGTCGTACTTTGGCAGATTACAAT 31286896 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| |||||||| || ||||| | ||| | || | || ||||| Sbjct 31286895 ATTCAGAAAGAATCTACCCTGCATCTTGTTCTTCGCCTCCGTGGTGG 31286849 Score = 140 bits (154), Expect = 5e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| ||| ||||||| || || || |||||||| ||| | ||| |||| || | Sbjct 31287531 ATGCAAATTTTTGTAAAGACCCTTACCGGAAAAACTATTACTTTGGAGGTTGAGAGTTCA 31287472 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| |||| | ||| || ||||||||||| || ||||| || || ||||| Sbjct 31287471 -GATACTATTGATAATGTGAAAGCTAAGATTCAAGATAAGGAGGGTATCCCTCCCGATCA 31287413 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || |||||||| ||||| || || || | || ||| | | || | | |||||||| Sbjct 31287412 GCAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACCCTTGCTGATTATAA 31287353 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 |||||||| ||||| || | ||||||||||| | | || |||||||| Sbjct 31287352 CATTCAAAAGGAATCGACCCTCCATTTGGTTTTGAGGCTTCGTGGTGGTAT 31287302 Score = 136 bits (150), Expect = 6e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 ||||||||| ||| | ||||| |||| || |||||||| ||| | ||| |||| || Sbjct 31260253 AATGCAAATTTTTGTTAAGACTTTAACTGGAAAAACTATTACTTTGGAGGTTGAGAGTTC 31260194 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 | ||||| ||| |||| | ||| || ||||||||||| || ||||| || ||||||| Sbjct 31260193 A-GATACTATTGATAATGTGAAAGCTAAGATTCAAGATAAGGAGGGTATCCCTCCTGATC 31260135 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 |||| |||||||| ||||| || || || | || ||| | | ||| | | ||||||| Sbjct 31260134 AACAGAGGCTTATCTTTGCTGGTAAGCAGCTTGAAGATGGAAGGACACTTGCCGATTATA 31260075 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || || || || || ||| | ||||||||||| | | || || ||||| Sbjct 31260074 ACATCCAGAAGGAGTCCACTCTCCATTTGGTTTTGAGGCTTCGTGGGGGTAT 31260023 Score = 127 bits (140), Expect = 3e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || || |||||| | ||| ||||| | Sbjct 31287303 ATGCAGATTTTTGTGAAGACTCTTACCGGAAAGACAATAACTTTGGAGGTTGAAAGTTCT 31287244 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||||||| || | ||| || ||||| || ||||| || || || || || || Sbjct 31287243 GATACAATTGACAACGTGAAAGCAAAGATTCAGGACAAAGAGGGCATTCCTCCAGACCAG 31287184 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||||| ||||| || || || || || || ||| | || || | | ||||||||| Sbjct 31287183 CAGAGGCTAATTTTCGCGGGCAAGCAGTTGGAAGATGGCCGTACTCTGGCTGATTATAAT 31287124 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||||| ||| ||||||||||||| | | |||||||| || Sbjct 31287123 ATCCAGAAAGAATCTACTCTGCATTTGGTTTTGAGGCTTCGAGGTGGGAT 31287074 Score = 125 bits (138), Expect = 1e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || || || || || || | ||| | || ||| Sbjct 35111141 ATGCAAATATTTGTGAAGACTCTCACTGGAAAGACAATCACCCTTGAGGTGGAGAGC-TC 35111083 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || || ||||| ||||| ||||| ||||| || || Sbjct 35111082 TGATACCATTGACAATGTTAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCAGACCA 35111023 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| |||||||| | || ||| | ||||||| | |||||||| Sbjct 35111022 GCAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCAGAACATTGGCCGATTATAA 35110963 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| |||||| | ||| | ||||| || | || |||||||| Sbjct 35110962 CATCCAGAAAGAGTCAACTCTTCATCTCGTTTTGCGACTTCGTGGTGGTAT 35110912 Score = 123 bits (136), Expect = 4e-23 Identities = 173/240 (72%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 |||||| || ||| ||||||| | || || || ||||| ||| | ||| | || || Sbjct 31287988 AATGCAGATTTTTGTAAAGACTTTGACTGGAAAGACTATTACTTTGGAGGTGGAGAGTTC 31287929 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 | ||||| ||| |||| | ||| || ||||||||||| || ||||| || || |||| Sbjct 31287928 A-GATACTATTGATAATGTGAAAGCTAAGATTCAAGATAAGGAGGGTATCCCTCCAGATC 31287870 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || |||||||| || || || || ||||| || || | || || | | ||||| | Sbjct 31287869 AGCAGAGGCTTATCTTCGCCGGTAAGCAATTGGAAGACGGGCGCACGCTCGCTGATTACA 31287810 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 | |||||||| || || || | ||||||||||| || | || |||||||| ||| || Sbjct 31287809 ACATTCAAAAGGAGTCCACCCTTCATTTGGTTTTGCGGCTTCGTGGTGGTATGCAAATTT 31287750 Score = 123 bits (136), Expect = 4e-23 Identities = 168/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAA 124596 |||||| |||||| | ||||| | || || || ||||| ||| | ||| |||| || Sbjct 31306453 AATGCAGATATTTGTTAAGACTTTGACTGGAAAGACTATTACTTTGGAGGTTGAGAGTTC 31306394 Query 124597 ATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 | ||||| ||| |||| | ||| || |||||||| || || ||||| || || |||| Sbjct 31306393 A-GATACTATTGATAATGTGAAAGCTAAGATTCAAGACAAGGAGGGTATCCCTCCCGATC 31306335 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 ||||||||||||| || || || || ||||| || || | || ||| | | ||||| | Sbjct 31306334 AACAAAGGCTTATCTTCGCCGGTAAGCAATTGGAAGACGGGCGCACACTTGGCGATTACA 31306275 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | |||||||| || || || | |||||||| | | || ||||||| || Sbjct 31306274 ACATTCAAAAGGAGTCCACCCTTCATTTGGTGCTTAGATTGAGAGGTGGAAT 31306223 Score = 111 bits (122), Expect = 2e-19 Identities = 167/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | ||||| || || ||||| || || ||| | || |||| || | Sbjct 35102028 ATGCAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 35101969 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| || ||| |||| || ||||||||||| || ||||| || ||||| || | Sbjct 35101968 -GATACCATAGACAATGTTAAGGCA-AAAATTCAAGACAAGGAAGGAATCCCACCAGACC 35101911 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || | || |||||||| || || || || |||||| | || || | | ||||||| Sbjct 35101910 AGCAGCGTCTGATTTTTGCTGGCAAGCAGTTGGAGGATGGGCGTACCCTTGCTGATTATA 35101851 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || ||||| ||||| || | |||||||| | ||| | || |||||||| Sbjct 35101850 ACATCCAAAAGGAATCCACCCTCCATTTGGTGCTCCGTCTCCGTGGTGGTAT 35101799 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || ||| | || ||||||||||| || | ||| | || | Sbjct 31288443 ATGCAAATCTTTGTGAAAACATTGACTGGCAAAACTATCACCCTCGAGGTGGAGAGTTCT 31288384 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || || | ||| || |||||||| || |||||||| || || ||||| Sbjct 31288383 GATACCATAGACAACGTTAAAGCTAAGATTCAAGACAAGGAAGGTATTCCTCCCGATCAG 31288324 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||| ||||| || |||||||| || ||| | || || | | ||||| || Sbjct 31288323 CAAAGGCTTATATTTGCTGGTAAACAATTGGAAGATGGCCGCACCCTTGCGGATTACAAC 31288264 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| || | || | || | || || ||||||| || Sbjct 31288263 ATCCAAAAGGAATCCACCCTTCACCTTGTGCTGCGATTGAGAGGTGGCAT 31288214 Score = 109 bits (120), Expect = 8e-19 Identities = 157/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | |||||||| ||||||||||| || ||| | ||| | || ||| Sbjct 35109545 ATGCAGATTTTTGTTAAGACACTCACAGGCAAAACAATTACTTTGGAGGTAGAGAGC-TC 35109487 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| |||| | || || || || || || || ||||| || || || || Sbjct 35109486 GGACACTATTGATAATGTCAAGGCCAAGATACAGGACAAGGAGGGTATCCCCCCAGACCA 35109427 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | |||||||| ||||| || | || ||| | | ||||| | |||||||| Sbjct 35109426 GCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGCAGGACATTGGCTGATTATAA 35109367 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTT 124756 ||||| || |||||||| | ||| | ||| | ||||| Sbjct 35109366 CATTCAGAAGGAATCAACCCTTCATCTTGTTCTTCGTTT 35109328 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| || || ||||| || || ||| | ||| | || ||| Sbjct 36294555 ATGCAGATTTTTGTGAAGACTCTTACTGGCAAGACAATTACTTTGGAGGTAGAGAGCTCG 36294614 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || |||||| ||| | || || || ||||| || || ||||| || || || || Sbjct 36294615 -GACACAATTGACAATGTGAAGGCCAAGATACAAGACAAGGAGGGTATTCCCCCAGACCA 36294673 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | |||||||| ||||| ||| | || || ||||||| | | |||||||| Sbjct 36294674 GCAAAGGTTGATTTTTGCTGGAAAGCAACTTGAAGACGGTCGAACTCTGGCTGATTATAA 36294733 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| || ||||| || ||| | ||| | || || || | || |||||||| Sbjct 36294734 TATCCAGAAAGAGTCGACTCTTCATCTTGTCTTGCGGCTTCGTGGTGGTAT 36294784 Score = 104 bits (114), Expect = 4e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || || || || || || | ||| | || ||| Sbjct 36294099 ATGCAAATATTTGTGAAGACTCTCACTGGAAAGACAATCACCCTTGAGGTGGAGAGC-TC 36294157 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || || || || ||||||||||| ||||| || || Sbjct 36294158 TGATACCATTGACAATGTTAAGGCCAAGATACAGGACAAAGAAGGTATTCCACCAGACCA 36294217 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| |||||||| | || ||| | |||| || | || || || Sbjct 36294218 GCAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCTTGGCTGACTACAA 36294277 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || |||||| | ||| | || || || | || |||||||| Sbjct 36294278 CATCCAGAAGGAGTCAACTCTCCATCTTGTGTTGCGACTTCGCGGTGGTAT 36294328 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA-GCAAA 124597 ||||| || ||| | ||||| | ||||| || || || || | ||| | ||| || | Sbjct 35109317 ATGCAGATCTTTGTGAAGACTTTGACAGGAAAGACCATTACATTGGAGGTGGAAAGCTCA 35109258 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 || || ||| |||| |||| || ||||| || ||||| || || || |||||||||| Sbjct 35109257 -GACACCATTGATAATGTTAAGGCA-AAAATACAGGATAAGGAGGGAATCCCACCTGATC 35109200 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || ||| | || ||||| || || || | || ||| | || || || | ||||| | Sbjct 35109199 AGCAGAGGTTGATCTTTGCTGGGAAGCAGCTTGAAGATGGCCGGACTTTGGCCGATTACA 35109140 Query 124717 ATATTCAAAAAGAATCAAC 124735 | ||||| ||||| || || Sbjct 35109139 ACATTCAGAAAGAGTCTAC 35109121 >seq8 Length=45569985 Score = 125 bits (138), Expect = 1e-23 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || ||||| || || || || | ||| | || ||| Sbjct 35000594 ATGCAAATATTTGTGAAGACTCTCACAGGAAAGACAATTACCCTTGAGGTGGAGAGC-TC 35000536 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || ||| ||| | || || || ||||| ||||| ||||| ||||| ||||| Sbjct 35000535 TGACACCATTGACAATGTCAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCAGATCA 35000476 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| |||||||| | || ||| | |||| || | |||||||| Sbjct 35000475 GCAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCTTGGCTGATTATAA 35000416 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| ||||| |||||| | ||| | || || || | || |||||||| Sbjct 35000415 CATTCAGAAAGAGTCAACTCTCCATCTTGTGTTGCGACTTCGTGGTGGTAT 35000365 Score = 114 bits (126), Expect = 2e-20 Identities = 172/238 (72%), Gaps = 5/238 (2%) Strand=Plus/Plus Query 124534 ATACA-ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA- 124591 ||||| |||||||| || | ||||| || || ||||| || || ||| | || |||| Sbjct 6167707 ATACAGATGCAAATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAG 6167766 Query 124592 AGCAAATGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCAC 124650 || | ||||| || ||| |||| || ||||||||||| || ||||| || |||| Sbjct 6167767 AGTTCA-GATACCATAGACAATGTTAAGGCA-AAAATTCAAGACAAGGAAGGAATCCCAC 6167824 Query 124651 CTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAG 124710 | || || || | || |||||||| || || || | |||||| | || || | | | Sbjct 6167825 CAGACCAGCAGCGACTGATTTTTGCTGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCTG 6167884 Query 124711 ATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||||| || ||||| ||||| ||| | |||||||| | ||| | || |||||||| Sbjct 6167885 ATTATAACATCCAAAAGGAATCCACTCTCCATTTGGTGCTCCGTCTCCGTGGTGGTAT 6167942 Score = 113 bits (124), Expect = 7e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||| || | ||||| || || ||||| || || ||| | || |||| || | Sbjct 35000822 ATGCAAATTTTCGTTAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 35000763 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| || ||| | || || |||||||| || ||||| || ||||||||||| Sbjct 35000762 -GATACCATAGACAATGTTAAGGCCAAGATTCAAGACAAGGAAGGGATCCCACCTGATCA 35000704 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || | || |||||||| || |||||| | |||||| | || || | | |||||||| Sbjct 35000703 GCAGCGTCTCATTTTTGCTGGCAAACAACTGGAGGATGGGCGTACCCTTGCGGATTATAA 35000644 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | |||||||| | ||| | || |||||||| Sbjct 35000643 CATCCAAAAGGAGTCTACCCTTCATTTGGTGCTCCGTCTCCGTGGTGGTAT 35000593 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || || || || || || | ||| | || ||| Sbjct 6167941 ATGCAAATATTTGTGAAGACTCTCACTGGAAAGACGATTACCCTTGAGGTGGAGAGC-TC 6167999 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||||| ||| ||| | || || || ||||| ||||| ||||| ||||| || || Sbjct 6168000 TGATACCATTGACAATGTTAAGGCCAAGATACAAGACAAAGAGGGTATCCCACCAGACCA 6168059 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| |||||||| | || ||| | |||| || | ||||| || Sbjct 6168060 GCAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGCAGAACCTTGGCTGATTACAA 6168119 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || |||||| | ||| | || || || | || |||||||| Sbjct 6168120 CATCCAGAAGGAGTCAACTCTCCATCTTGTGTTGCGACTTCGCGGTGGTAT 6168170 >seq6 Length=35275713 Score = 102 bits (112), Expect = 1e-16 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||||||||| | ||||| || || ||||| || || ||| | || |||| || | Sbjct 24039084 ATGCAAATATTCGTCAAGACTCTTACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 24039143 Query 124598 TGATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATC 124656 ||||| || ||| |||| || ||||||||||| || ||||| || |||||||| | Sbjct 24039144 -GATACCATAGACAATGTTAAGGCA-AAAATTCAAGACAAGGAAGGAATCCCACCTGACC 24039201 Query 124657 AACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATA 124716 | || | || |||||||| || || || | |||||| | || || | | ||||| | Sbjct 24039202 AGCAGCGTCTGATTTTTGCTGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCTGATTACA 24039261 Query 124717 ATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 | || ||||| || || || | |||||||| | ||| | || ||||| || Sbjct 24039262 ACATCCAAAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTCCGTGGTGGGAT 24039313 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 3/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | ||||| || || || ||||| || ||| | ||| | || ||| | Sbjct 24039540 ATGCAGATTTTTGTGAAGACCCTCACCGGAAAAACAATTACTTTGGAGGTAGAGAGCTCA 24039599 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | || || || || || || || ||||| || || || || Sbjct 24039600 -GATACTATTGACAATGTGAAGGCCAAGATACAGGACAAGGAGGGTATCCC-CCAGACCA 24039657 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | ||||| || ||||| || | || ||| | | ||||| | |||||||| Sbjct 24039658 GCAAAGGTTGATTTTCGCTGGAAAGCAGCTTGAAGATGGCAGGACATTGGCTGATTATAA 24039717 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||| || || ||||| || | ||| | ||| | ||||| | || ||||| Sbjct 24039718 TATCCAGAAGGAATCCACCCTTCATCTTGTTCTTCGTTTGAGGGGAGGTAT 24039768 >seq1 Length=52991155 Score = 102 bits (112), Expect = 1e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || |||||||| ||||| ||||| | || ||||| | | Sbjct 28610592 ATGCAAATCTTTGTCAAAACCCTAACAGGGAAAACCATAACCCTGGAAGTTGAATCTTCT 28610651 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || ||||| || | || ||| |||||||| || ||||| || ||||| ||||| Sbjct 28610652 GACACAATCGACAACGTGAAGGCGAAGATTCAAGACAAGGAAGGCATTCCACCGGATCAG 28610711 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | | || |||||||| || || || || ||| | |||| | | ||||||||| Sbjct 28610712 CAACGATTGATCTTTGCAGGGAAGCAGTTGGAAGATGGAAGAACTCTTGCGGATTATAAT 28610771 Query 124719 ATTCAAAAAGA 124729 || || ||||| Sbjct 28610772 ATCCAGAAAGA 28610782 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| |||||| | ||||| | || || || || || ||| ||||| | || | Sbjct 28610820 ATGCAGATATTTGTGAAGACGTTGACCGGGAAGACAATTACTCTAGAGGTGGAGAGTTCT 28610879 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| ||| | || || ||||| ||||| || || || ||||| ||||| Sbjct 28610880 GATACTATTGATAACGTGAAGGCCAAGATTCAGGATAAGGAGGGCATTCCACCGGATCAG 28610939 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | | || ||||| ||||||||| | |||||| | | || | | ||||||||| Sbjct 28610940 CAGCGATTGATCTTTGCTGGAAAACAACTTGAGGATGGGAGGACTCTCGCTGATTATAAT 28610999 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||||| ||||| || || | ||| | ||| | | |||| |||||| Sbjct 28611000 ATTCAGAAAGAGTCTACGCTTCATCTTGTTCTCAGGCTACGTGGTGGT 28611047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755435347721600