Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq7 237 2e-57 seq276 217 2e-51 seq3 203 4e-47 seq1 203 4e-47 seq8 176 6e-39 seq4 86.0 8e-12 >seq7 Length=49172423 Score = 237 bits (262), Expect = 2e-57 Identities = 601/907 (66%), Gaps = 8/907 (1%) Strand=Plus/Plus Query 33290 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33349 ||| || || || || ||||| || || || |||||||| || |||| | || || Sbjct 10196786 TTTCTGATACTCCCCAACACGCTTCTCAAAGAAATTAGTATTCCCTTGAAGAGAAATCAA 10196845 Query 33350 TTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAAT 33409 ||||| ||||||||||||| |||||| |||| |||| | | || | ||| | Sbjct 10196846 ATCCATCCAATCAAACGGATTCTGAACATTATAAACCTTTTCACAACCAAGATCACCCAA 10196905 Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGA- 33468 |||||||| || || || || ||||| || |||||| | ||| |||||| || | | Sbjct 10196906 TAATCTATCAGCAACAAACTCAATATAAGTACTCATCAATCCACCATTCATCCCAACCAA 10196965 Query 33469 -GTTTAACTGGAAGAGCCACAGTA-AGAAATTCTTGTTCAATGGATACCGCATTTGTTAT 33526 | || |||||||| | || | | |||||| ||||||| || ||||| || Sbjct 10196966 CGCGCAA--GGAAGAGC-ATAGCAGACAAATTCACGTTCAATTTCAACAGCATTGCATAC 10197022 Query 33527 AATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGC 33586 ||| | || ||| | | || | || || | || | | |||||| || Sbjct 10197023 AATTTCCTTCACACGCTCTGAAGTTAGTTTCTTTAGTAGAAGTGAGTATAACAAACAAGC 10197082 Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646 ||||| ||||||||||| ||||| | ||| | ||||| || || || | || || Sbjct 10197083 AAAATCACAGTGCAGACCTTCGTCACGTGAAATAAGCTCGTTTGAGAATGTTAACCCTGG 10197142 Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATG-ATCCGGAAAAGAAGATTC 33705 ||||| || |||||||| | ||| || || | || || | |||||| ||||| |||| Sbjct 10197143 CATTAAACCGCGCTTTTTCAACCAGAAAATCG-CGCAAAAGCTTCCGGAGAAGAAAATTC 10197201 Query 33706 CTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACT 33765 ||||||| |||||| |||| | ||| || || || |||| || ||||| | Sbjct 10197202 CTTCTACACAAGCAAATGCAACGATTCTTTCAGCAAAAGAATCGCTTGAATCAATCCATT 10197261 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 | |||||||| ||||| || | ||| || || || || || |||| ||| | Sbjct 10197262 TCATTGCCCAATCAGCCTTTTTCGCGATACATGGAATTGTCTCAATTGCATGAAATAAGC 10197321 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 || |||||| | ||| | | ||| || || || | ||| ||||| || |||| Sbjct 10197322 GATTCTTTTCAGCAGAATCGCTTATATATGTTTCAATGAGAAGGGAGTACATCTCAGAAT 10197381 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 | ||||||||||| || || || || || ||||| | || |||| || || |||| Sbjct 10197382 GGATGTTTTCAATTGCAATTTGGAAACCATAGAAGGCACGTGCTTCGGAGATTTGGACTT 10197441 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 || | |||| | | || | ||||||| || ||||| || ||| || || || | Sbjct 10197442 CTTTCATGAATCTTCCGGCAAGATTTTCAAGGACAATTCCGTCTGAGGCGGCGAAGAAGG 10197501 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATAT 34065 | | || || || || | |||| | ||| || || ||||| | |||| || Sbjct 10197502 CAAGAACGTGAGAGATGAAGTGGCGTTCGCCGTCTGTGAGGTTGTTCCAGTGCTTGAGAT 10197561 Query 34066 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 34125 | || | ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 10197562 CGGAGGAAAGATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTT 10197621 Query 34126 TCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGA 34185 |||||| | | |||||||||||||| || |||| | ||| |||||||| || | Sbjct 10197622 CCCAGATTTTTGGGTATTGGATTGGGAACATGCAGAATCGGTCTGGGTTTGGTGCGAGAA 10197681 Query 34186 TAGGTTC 34192 ||||| Sbjct 10197682 GTGGTTC 10197688 >seq276 Length=24472 Score = 217 bits (240), Expect = 2e-51 Identities = 597/908 (66%), Gaps = 10/908 (1%) Strand=Plus/Minus Query 33290 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33349 ||| || || || || ||||| || || || ||||| || || |||| | || || Sbjct 23302 TTTCTGATACTCCCCAACACGCTTCTCAAAGAAATTCGTCTTCCCTTGAAGGGAAATCAA 23243 Query 33350 TTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAAT 33409 ||||| ||||||||||||| |||||| |||| |||| | | || | ||| | Sbjct 23242 CTCCATCCAATCAAACGGATTCTGAACATTATAAACCTTTTCACAACCAAGCTCACCCAA 23183 Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGA- 33468 |||||||| || || || || ||||| || |||||| | ||| |||||| || | | Sbjct 23182 TAATCTATCAGCAACAAACTCAATATAAGTACTCATCAATCCACCATTCATCCCAACCAA 23123 Query 33469 -GTTTAACTGGAAGAGCCA--CAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTA 33525 | || ||||| || ||| | |||||| ||||||| || ||||| || Sbjct 23122 CGCGCAA--GGAAGTGCTTTGCAG--ACAAATTCACGTTCAATTTCAACAGCATTGCATA 23067 Query 33526 TAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATG 33585 ||| | || ||| | | || | | || | || | | |||||| | Sbjct 23066 CAATTTCCTTCACACGCTCTGAAGTTAGTTTCTTTTGTAGAAGTGAGTATAACAAACAAG 23007 Query 33586 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGG 33645 | ||||| ||||||||||| ||||| | ||| | ||||| || || || | || | Sbjct 23006 CAAAATCACAGTGCAGACCTTCGTCACGTGAAATAAGCTCGTTTGAGAATGTTAACCCTG 22947 Query 33646 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT-CCGGAAAAGAAGATT 33704 |||||| || |||||||| | ||| || || | || || | | ||||| ||||| ||| Sbjct 22946 GCATTAAACCGCGCTTTTTCAACCAGAAAATCGC-GCAAAAGCTTCCGGAGAAGAAAATT 22888 Query 33705 CCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCAC 33764 |||||||| |||||| |||| | ||| || || || |||| || ||||| Sbjct 22887 CCTTCTACACAAGCAAATGCAACGATTCTTTCAGCAAAAGAATCGCTTGAATCAATCCAT 22828 Query 33765 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 33824 || |||||||| ||||| || | ||| || || || || || |||| ||| | Sbjct 22827 TTCATTGCCCAATCAGCCTTTTTCGCGATACATGGAATTGTCTCAATTGCATGAAATAAG 22768 Query 33825 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 33884 || |||||| | ||| | | ||| || || || | ||| ||||| || ||| Sbjct 22767 CGATTCTTTTCAGCAGAATCGCTTATATATGTTTCAATGAGAAGGGAGTACATCTCAGAA 22708 Query 33885 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACT 33944 || ||||||||||| || || || || || ||||| | || |||| || || ||| Sbjct 22707 TGGATGTTTTCAATTGCAATTTGGAAACCATAGAAGGCACGTGCTTCGGAGATTTGGACT 22648 Query 33945 TCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAAC 34004 ||| | |||| | | || | ||||||| || ||||| || ||| || || || Sbjct 22647 TCTTTCATGAATCTTCCGGCAAGATTTTCAAGGACAATTCCGTCTGAGGCGGCGAAGAAG 22588 Query 34005 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATA 34064 || | || || || || | |||| | ||| || || ||||| | |||| | Sbjct 22587 GCAAGAACGTGAGAGATGAAGTGGCGTTCGCCGTCTGTGAGGTTGTTCCAGTGCTTGAGA 22528 Query 34065 TCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 34124 || || | ||| |||||||| | ||||| ||||| || || || ||||| ||||| Sbjct 22527 TCGGAGGAAAGATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATT 22468 Query 34125 TTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGG 34184 | |||||| | | |||||||||||||| || |||| | ||| |||||||| || Sbjct 22467 TCCCAGATTTTTGGGTATTGGATTGGGAACATGCAGAATCGGTCTGGGTTTGGTGCGAGA 22408 Query 34185 ATAGGTTC 34192 | ||||| Sbjct 22407 AGTGGTTC 22400 >seq3 Length=55515152 Score = 203 bits (224), Expect = 4e-47 Identities = 619/950 (65%), Gaps = 10/950 (1%) Strand=Plus/Plus Query 62921 ATCTATTACAAA-CATGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCATTAG 62979 |||| ||||||| | | | | ||||| ||||| || |||||||| || ||| | | Sbjct 2060447 ATCTCTTACAAAACGCGGT-AGTGCAATTGATGCAAGGTTACACACAGCAGTCTCTGTTG 2060505 Query 62980 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTT 63039 | | ||| || |||||||||||||| ||||| |||| || || || | ||| | Sbjct 2060506 GACTTGTATACTGGATTATCTCAGTGCACAGATTTGATGACTTAATTGTGCCCAGATTCT 2060565 Query 63040 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAA 63099 | || || || || | || || | ||||||| |||| ||| | ||| | |||||||| | Sbjct 2060566 GCTGGTTGCTTTTCCTATTGCAAGTATCCTTAAAAAGCATGTAAGGATTTCCAGTTTCTA 2060625 Query 63100 TCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTC 63158 |||| || | | ||| || ||| | || || | || | | || ||| | | Sbjct 2060626 TCTGTGACTTCAAAATTGCAAACCACA-GAGTCCGTGCTTGAACAATCTTTTTTGCTTTT 2060684 Query 63159 CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63218 | | || |||| || |||| |||| || || || || |||||| || |||| Sbjct 2060685 CCTGCTTTTTCATACTGAGTGTACAGCTTATCAAATTCTTCACCCCAACAATCTGCCAAA 2060744 Query 63219 CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCA---CTCGTTTC 63275 | ||| ||||| || || | || ||||| || || ||| ||| ||| || | Sbjct 2060745 CCAGGTGCTTCATTGGGGCAGAACAGGGACCATTCCCC---ATCGCTCAGAGCTCTTTCC 2060801 Query 63276 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTT 63335 |||||||||||||| | |||||| || ||||| ||||| | | || || || ||| Sbjct 2060802 ATAAAGAGATCAGGCACCCAAAGGGCGTAAAATAAATCTCGAGCACGTTGCTCTTCCTTT 2060861 Query 63336 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63395 || ||| |||| | || ||||| | | ||||||| |||||| || |||||||| Sbjct 2060862 CCATGATTTATTTTCAATTCCAGGAAGTCAAATATATCAGCATGCCATGGCTCCAAGTAC 2060921 Query 63396 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63455 | || | | | || || ||| ||| |||||||| | || | || || | ||| Sbjct 2060922 ACAGCAAAAGCACCTTTCCTCTTGCCTCCCCCCTGATCAACATAACGTGCAGTATCATTG 2060981 Query 63456 TAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCT 63515 | || | | ||| |||| |||||| || || | ||||| || || || || | Sbjct 2060982 AACACACGAAGCATCGGAACAATACCATTAGACGTTCCATTTGTTCCCCGAATGTAACTA 2061041 Query 63516 CCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAAT 63575 || |||||| ||||| || || | ||| || || || || |||| || | Sbjct 2061042 CCTTGGGCACGTATATTGTGAACAGAAACACCAATCCCTCCAGCAGATTTACTAATGACA 2061101 Query 63576 GCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGA 63635 || || || || || ||||| || || || || ||||| || ||||| || | Sbjct 2061102 GCACACTCCTTCAATGTATCATAAATCCCCTCAATACTATCCTCTTTCATGCAAACCAAG 2061161 Query 63636 AAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGC 63695 || || ||| || || | | || ||||| || || || | ||||||||||| || Sbjct 2061162 AAGCAACTACTCAACTGAGGCCTAGGTGTTCCGGCGTTGAAAAGTGTAGGAGAAGCATGA 2061221 Query 63696 GTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGA 63755 || |||||| | | ||| | | || || || | | ||| || || | ||| || Sbjct 2061222 GTGAACCATCTCTGAGACATGAAATGATAAGTTTTGACAGCAGATTCAACATCATCTTTG 2061281 Query 63756 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTT 63815 |||||||| || | || | ||||| ||| || ||||||||||| |||| | Sbjct 2061282 TGAATTCCAACAGAAACCCTCATTATCATATGTTGAGGTCTTTCCACAACCACTCCTTCA 2061341 Query 63816 ATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63865 | |||||||| || || |||| | ||||| || ||||| || | ||| Sbjct 2061342 ACTTTCAACAGATAAGACCTTTCTAGGGTTTTGAATCCAAAGTAATCGTA 2061391 >seq1 Length=52991155 Score = 203 bits (224), Expect = 4e-47 Identities = 592/909 (65%), Gaps = 12/909 (1%) Strand=Plus/Minus Query 33290 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 33349 ||| || || || || || || || || |||||||| |||||||| | | || || Sbjct 19457813 TTTCTGATACTCCCCAACGCGCTTCTCAAAAAAATTGGTTTTTCCCTGAAGCGAAATCAA 19457754 Query 33350 TTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAAT 33409 |||||| ||||||||||||| ||||||||||| |||| | | || | ||| | Sbjct 19457753 TTCCATCCAATCAAACGGATTCTGAACATTGTAAACCTTTTCACAACCAAGCTCACCCAA 19457694 Query 33410 CAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGA- 33468 || ||||| || || || || ||||| || |||||| | | |||||| || | | Sbjct 19457693 TAACCTATCAGCAACAAACTCAATATACGTACTCATCAAACCCCCATTCATCCCAACCAA 19457634 Query 33469 -GTTTAACTGGAAGAGC----CACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGT 33523 | || ||||| || |||| ||| || |||||| || |||| Sbjct 19457633 CGCGCAA--GGAAGCGCGTGGCACAC----AAACTCCCTTTCAATTTCAACAGCATCACA 19457580 Query 33524 TATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACA 33583 | ||| | | ||| ||| ||| | | | || | || | | |||||| Sbjct 19457579 AACAATTTCTTTCACGCGCTCTGAACTTAGCTTCTTTCGTAGAAGTGAGTATAACAAACA 19457520 Query 33584 TGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCC 33643 |||||||| ||||||| || ||||| | ||| | ||||| || || || | ||| Sbjct 19457519 AGCGAAATCACAGTGCAATCCTTCGTCGCGTGAAATAAGCTCGTTTGAGAAGGTTAATCC 19457460 Query 33644 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGAT 33703 ||||||| || |||||||| | ||| || || | | ||| |||||| || ||||| Sbjct 19457459 CGGCATTAAACCGCGCTTTTTCAACCAGAAAATCGCACAGAAGCTTCCGGAGAAAAAGAT 19457400 Query 33704 TCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCA 33763 |||||| || |||||| |||| | ||| ||| || || |||| || ||||| Sbjct 19457399 TCCTTCAACACAAGCAAACGCAACGATTCTTTCTGCAAAAGAATCGCTTGAATCGATCCA 19457340 Query 33764 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33823 || |||||||| || ||||| | ||| || || ||||| || |||| ||| | Sbjct 19457339 TTTCATCGCCCAATCAGCTTTCTTCGCGATACATGGAATTGTTTCAATTGCATGAAATAA 19457280 Query 33824 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33883 || |||||| ||| | | ||| || |||| | |||| |||||| || || Sbjct 19457279 GCGATTCTTTTCAGCGGAATCGCTTATATACGTTTCGAGGAGAAGAGAATACATCTCAGA 19457220 Query 33884 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 33943 || ||||||||||| || ||||| || |||||||| | || || | | || | Sbjct 19457219 GTGGATGTTTTCAATTGCAATCTGGAAACCGTAGAAGGCACGTGCTTCAGAGACTTGGAT 19457160 Query 33944 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003 |||| | ||||| | || | ||||||| || || || || ||| || || || Sbjct 19457159 TTCTTTCATAAATCTACCGGCGAGATTTTCAAGGACGATGCCGTCGGAGGCAGCGAAGAA 19457100 Query 34004 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 34063 || | ||||| || || | |||| | || || || | ||| | |||| Sbjct 19457099 GGCGAGGACATGAGAGATGAAGTGGCGTTCGCCGTCGGTGAGGTTTTGCCAGTGCTTGAG 19457040 Query 34064 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 34123 ||| || | ||| |||||||| | ||||| ||||| || || || ||||| ||||| Sbjct 19457039 ATCGGAGGAAAGATCGACTTCTTCAGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACAT 19456980 Query 34124 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAG 34183 | |||||| | | |||||||||||||| || |||| | ||| ||||| ||||| Sbjct 19456979 TTCCCAGATTTTTGGGTATTGGATTGGGAACATGCAGAATCGGTCTGGGTTTGGGGCAAG 19456920 Query 34184 GATAGGTTC 34192 | ||||| Sbjct 19456919 AAGGGGTTC 19456911 >seq8 Length=45569985 Score = 176 bits (194), Expect = 6e-39 Identities = 410/616 (67%), Gaps = 2/616 (0%) Strand=Plus/Plus Query 33578 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGT 33637 |||||| || ||||| ||||| | || ||||| | ||| | ||||| || || || Sbjct 25025566 CAAACAAGCAAAATCACAGTGTAAGCCTTCGTCGCGTGAAATAAGCTCGTTTGAGAAAGT 25025625 Query 33638 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAA 33697 | ||| ||||||| || || ||||| | ||| || || | | ||| |||||| || Sbjct 25025626 TAATCCCGGCATTAAACCGCGTTTTTTCAACCAGAAAATCGCACAGAAGCTTCCGGAGAA 25025685 Query 33698 GAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATG 33757 ||| |||||||| || ||| || |||| | ||| ||| || || |||| || Sbjct 25025686 GAAAATTCCTTCAACACAAGCGAAAGCAACGATTCTTTCTGCAAAAGAATCGCTTGAATC 25025745 Query 33758 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| || ||||||||| || ||||| | ||| || || || || || || | Sbjct 25025746 GATCCATTTCAAAGCCCAATCAGCTTTCTTAGCAATACACGGAATTGTGTCAATTGCGTG 25025805 Query 33818 AAAGAGATAGttt-ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33876 ||| | || | || |||||| | ||| | | ||| || |||| | |||| ||||| Sbjct 25025806 AAATA-ATCGATTCTTTTCAGCAGAATCGCTTATATACGTTTCGAGGAGAAGAGAATACA 25025864 Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936 | || || || ||||||||||| || || ||||| ||||||||| | || || | | Sbjct 25025865 TCTCTGAGTGGATGTTTTCAATAGCGATTTGAAACCCGTAGAAAGCACGCGCTTCAGAGA 25025924 Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996 | || |||||| | |||| | | || | |||||| || || || || ||| | Sbjct 25025925 TTTGAACTTCTTTCATGAATCTTCCGGCGAGATTTTCGAGGACGATACCGTCGGAGGCGG 25025984 Query 33997 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAAT 34056 | || || || | | || || || | |||| | || || || ||||| | Sbjct 25025985 CGAAGAAGGCGAGGATGTGAGAGATGAAGTGGCGTTCGCCGTCGGTGAGGTTGTTCCAGT 25026044 Query 34057 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 34116 | | ||| || | ||| |||||||| | ||||| || || || || || |||| Sbjct 25026045 GTTGAAGATCGGAGGAAAGATCGACTTCTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTTT 25026104 Query 34117 TATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTG 34176 | ||||| | |||||| | | |||||||||||||| ||| |||| | ||| |||| Sbjct 25026105 TGTACATTTCCCAGATTTTTGGGTATTGGATTGGGAACATACAGAATCGGTCTGGGTTTG 25026164 Query 34177 GTGCAAGGATAGGTTC 34192 | || || | |||||| Sbjct 25026165 GAGCGAGAAGAGGTTC 25026180 >seq4 Length=56582383 Score = 86.0 bits (94), Expect = 8e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || ||||| ||||| ||||||||||||||| |||| || || || || || || Sbjct 48679912 CAAGCAAAATCACAGTGAAGACCCTCGTCTCTAGAGATTAGCTCATTTGAGAATGTCAGA 48679971 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG 33678 || ||||||| || | |||||||||||||||||||| Sbjct 48679972 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATGG 48680008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629800382361360