Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq979 123 2e-23 seq1 123 2e-23 seq4 109 5e-19 seq7 104 2e-17 seq8 102 8e-17 seq6 89.7 5e-13 seq5 87.8 2e-12 >seq979 Length=3763 Score = 123 bits (136), Expect = 2e-23 Identities = 338/502 (67%), Gaps = 22/502 (4%) Strand=Plus/Plus Query 20529 GTCGGGTTTCCAGGCGGGTGCAAACAATGCGGTTTGATGTCCCAGATCCGT-AG--TGGA 20585 ||| |||||||| ||||| || || || || || || ||||| ||||| || || | Sbjct 898 GTCCGGTTTCCACGCGGGCGCGTGCAGCGCCGTCTGGTGACCCAGCTCCGTCAGGCTGAA 957 Query 20586 CCAGGCTCCTTTGAAATCGTACGACATTAAGAATATGGTATCGAGGTATTTTTGCGCTTC 20645 | || || | | | ||||||| ||| ||| ||| || | ||| || ||||| Sbjct 958 C---GCACCGTAGTAGTCGTACGTCATGTCGAAGATGTAGTCCATGTACTTCGTGGCTTC 1014 Query 20646 GGTGTAATCGACCACAGCAATCTTATCGTCGCCCGCGCTTATCGCGCTCGTCAACAGATA 20705 |||| | ||||| | ||||| || | |||||||| ||||| ||||| | | Sbjct 1015 CTTGTAGTTCACCACGTCGATCTTGTCCTTGCCCGCGCCGATCGCCGACGTCAGC---TC 1071 Query 20706 GTAACGATTGT-GATGTATGCCGAGG-GCG-TCGAGCAT--GCCGCGAAGTTCACGCAGC 20760 ||| ||| | ||| ||||| ||| |||||||| ||||| ||||| || | Sbjct 1072 GTAGGTCTTGCCGGTGTCCGCCGACACGCGGTCGAGCATCTGCCGC--AGTTCCTTCATC 1129 Query 20761 AGGATCGTGTACGTGGCTCGATCGCGTTCGGCG--TCGCCGACATTGGGGTTCGCGCCAT 20818 || || ||| || | || ||| | ||| | ||||| | ||||||||| | Sbjct 1130 AGCGTCACATACAGCGCGCCGTC-CGT-CTGCGGATTGCCGATCGCGCCGTTCGCGCCCT 1187 Query 20819 TGCCGCCCGGAAACTCCCAATCAATGTCGACGCCATCAAAGAATTTCCACGTTTCTAGAT 20878 |||||||||| || ||||| || |||||||| || || ||||| ||||| || || Sbjct 1188 TGCCGCCCGGGAATTCCCAGTCGATGTCGACACCGTCGAAGAACTTCCAGGTGCGCAGCA 1247 Query 20879 ACTCTTGGACCGAATCGATAAACGTTTGGCGCACGATCTTGTCGTGCATATGGAAAAATG 20938 ||| | | |||||||| ||| | |||| | | |||||||| ||||| || | Sbjct 1248 ACTGCTCGGTCGAATCGACGAACACCTTGCGCTTGGCCGGGTCGTGCAGCTGGAAGAACG 1307 Query 20939 GGTCCGAAAGTGTCCAGCCCCCGATAGACGGTAACACTTTGAGATGCGGGTTCGC-CAAT 20997 | || || || |||||||| ||||| ||||| | | ||||| | |||| | || | Sbjct 1308 GATCGGACAGCGTCCAGCCGCCGATCGACGGCAGGATCTTGAGGT-CGGGATTGCGCTTC 1366 Query 20998 TTCGCGGCCATAAGTTGGCCAA 21019 ||||||||||| | ||||||| Sbjct 1367 TTCGCGGCCATCATCTGGCCAA 1388 >seq1 Length=52991155 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | ||| | ||||| ||| |||||||| || || || ||||| Sbjct 28610591 GCCACCACGGAGACGGAGAACAAGGTGAAGCGTGGACTCTTTCTGGATATTGTAATCCGC 28610532 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || || |||||| |||||||| || || |||| |||||||| || || || || Sbjct 28610531 AAGAGTTCTACCGTCTTCTAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCAGGTGG 28610472 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| |||||| ||| | | || | |||||||| | || || Sbjct 28610471 AATTCCTTCTTTGTCTTGGATTTTGGCTTTGACGTTGTCGATTGTGTCGGATGATTCTAC 28610412 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | || ||||||||||| ||||| ||||| || ||||| Sbjct 28610411 CTCTAGGGTTATTGTTTTGCCGGTCAAGGTTTTCACGAAAATCTGCAT 28610364 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| |||||||||||| ||||| |||||||| | || ||| || || || ||| Sbjct 28611022 TGAAGCGTAGACTCTTTCTGAATATTATAATCAGCGAGAGTCCTCCCATCCTCAAGTTGT 28610963 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| |||||| || |||||||| || || ||||| || || || ||| | || Sbjct 28610962 TTTCCAGCAAAGATCAATCGCTGCTGATCCGGTGGAATGCCCTCCTTATC-CTGAATCTT 28610904 Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | || | | || | || || | ||||||||| | || | ||||| ||||| Sbjct 28610903 GGCCTTCACGTTATCAATAGTATCAGAACTCTCCACCTCTAGAGTAATTGTCTTCCCGGT 28610844 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 |||||| || || ||||| ||||| Sbjct 28610843 CAACGTCTTCACAAATATCTGCAT 28610820 >seq4 Length=56582383 Score = 109 bits (120), Expect = 5e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||||||| | |||| || |||||||| || |||||||||||| || ||| || Sbjct 35110927 CGCAAAACGAGATGAAGAGTTGACTCTTTCTGGATGTTATAATCGGCCAATGTTCTGCCA 35110986 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| |||||||| |||||| |||| || | ||||| || || || || || |||||| Sbjct 35110987 TCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTG 35111046 Query 139670 TCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || || | || | ||| | | || | || || | | ||||||||||| ||| | Sbjct 35111047 TC-TTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGAT 35111105 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || | || || || |||||||||||| Sbjct 35111106 TGTCTTTCCAGTGAGAGTCTTCACAAATATTTGCATA 35111142 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| || |||| || | ||||| || || || ||||| ||||| ||||| Sbjct 31288216 GCCACCTCTCAATCGCAGCACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAATCCGC 31288275 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| ||||| | |||||||||||| | || || | ||||||||||||||| Sbjct 31288276 AAGGGTGCGGCCATCTTCCAATTGTTTACCAGCAAATATAAGCCTTTGCTGATCGGGAGG 31288335 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||| ||||| ||| | || | |||| | | || | || || | ||||| Sbjct 31288336 AATACCTTCCTTGTC-TTGAATCTTAGCTTTAACGTTGTCTATGGTATCAGAACTCTCCA 31288394 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 |||| | ||| | || ||||| ||||| ||||| || || |||||||| Sbjct 31288395 CCTCGAGGGTGATAGTTTTGCCAGTCAATGTTTTCACAAAGATTTGCAT 31288443 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| ||||| ||||||||||| | || | | || || ||||| || ||| Sbjct 35111173 GTGGACTCCTTTTGGATGTTATAATCAGCAAGGGTACGCCTATCCTCCAGCTGCTTGCCA 35111232 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| | |||||||| ||||| || ||||| || ||||||||||| ||| | || | || Sbjct 35111233 GCAAAAATCAGACGCTGCTGGTCTGGAGGGATCCCTTCTTTGTC-TTGAATCTTGGCCTT 35111291 Query 139688 AGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746 | | | || | ||| |||| | ||||||||||| ||| | ||||| || || | || Sbjct 35111292 AACATTGTCAATTGTATCGGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCTGTGAGAGT 35111351 Query 139747 TTTTACGAATATTTGCAT 139764 || || || |||||||| Sbjct 35111352 CTTCACAAAGATTTGCAT 35111369 Score = 100 bits (110), Expect = 3e-16 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCTCATTGTGCTCGAGTCTTC 139614 || || |||| ||||| || || || ||||||||||| ||| | || || || || Sbjct 31260500 ACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAGCT-AGGGTTCTTCCATCCTC 31260558 Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674 ||| ||||| |||||| |||| || | |||||||| ||||| || || |||||||| | Sbjct 31260559 GAGTTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCAGGAGGGATTCCCTCTTTGTC-TT 31260617 Query 139675 GATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCT 139733 || | || | || | | || | ||| || | | |||||||||| ||| | || | Sbjct 31260618 GAATCTTGGCCTTGACATTATCAATTGTATCTGATGATTCCACCTCAAGGGTGATGGTTT 31260677 Query 139734 TGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || ||||| ||||| ||||| |||||||| Sbjct 31260678 TACCAGTCAATGTTTTCACGAAGATTTGCAT 31260708 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||||||| | ||||| |||||||| || |||||||| || || Sbjct 35100471 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 35100530 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || | || || |||||| |||||| | |||||||| || || Sbjct 35100531 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 35100590 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||||||| || | | || | |||||| | || ||| Sbjct 35100591 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTACC 35100650 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | ||||| ||||||||||| || || || || |||||| || Sbjct 35100651 TCTAAGGTGATGGTCTTACCGGTCAACGTCTTCACAAAGATCTGCATACCT 35100701 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||||||| | ||||| |||||||| || |||||||| || || Sbjct 35108863 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 35108922 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || | || || |||||| |||||| | |||||||| || || Sbjct 35108923 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 35108982 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||||||| || | | || | |||||| | || ||| Sbjct 35108983 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTACC 35109042 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | ||||| ||||||||||| || || || || |||||| || Sbjct 35109043 TCTAAGGTGATGGTCTTACCGGTCAACGTCTTCACAAAGATCTGCATACCT 35109093 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || || |||| || ||||| ||||||||||| ||||||| | ||||| | |||||| Sbjct 31306244 ACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCGCCAAGTGTGCGCCCGTCTTCC 31306303 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 | || ||||| || |||| || | ||| ||||||||||| || || || ||||| || Sbjct 31306304 AATTGCTTACCGGCGAAGATAAGCCTTTGTTGATCGGGAGGGATACCCTCCTTGTC-TTG 31306362 Query 139676 ATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734 | | || | ||| | | || | || || | ||| ||||| | || | ||||| Sbjct 31306363 AATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTAATAGTCTT 31306422 Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || ||||| || || || ||||| ||||| Sbjct 31306423 TCCAGTCAAAGTCTTAACAAATATCTGCAT 31306452 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATC-GCTCATTGTGCTCGAGTCTTCGAGCTG 139620 |||| ||||| || || || ||||||||||| ||| | || || || |||||||| Sbjct 31288013 TGAAGGGTAGATTCCTTCTGGATGTTATAATCAGCT-AGGGTTCTTCCATCCTCGAGCTG 31288071 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 ||| || ||| |||| || | |||||||| ||||| || || |||||||| ||| || Sbjct 31288072 TTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGGGATACCCTCTTTGTCTTGGATCTT 31288131 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 || | | || | ||| || | | || ||||||| ||| | || || ||||| Sbjct 31288132 GGCCTTGACATTATCAATTGTATCAGATGATTCAACCTCAAGGGTGATTGTTTTTCCGGT 31288191 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 ||| || || || ||||| ||||| Sbjct 31288192 CAATGTCTTCACAAATATCTGCAT 31288215 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCTC--ATTGTGCTCGAGTCT 139612 || || |||| ||||| || || || ||||||||||| ||| ||| | || | || Sbjct 31306472 ACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAGCTAGGATTCT--TCCA-TCC 31306528 Query 139613 TCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 139672 |||||||||||||| ||| |||| || | |||||||| ||||| || || |||||||| Sbjct 31306529 TCGAGCTGTTTACCTGCAAAGATAAGCCTCTGCTGATCAGGAGGGATACCCTCTTTGTCT 31306588 Query 139673 GTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTC 139732 ||| || || | | || | ||| |||| ||| ||||||| || | || Sbjct 31306589 TGGATCTTGGCCTTGACATTATCAATTGTATCGGAACTCTCTACCTCAAGAGTGATGGTT 31306648 Query 139733 TTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || ||||| ||||| || || || ||||| Sbjct 31306649 TTTCCTGTCAATGTTTTCACAAAGATCTGCAT 31306680 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| ||||||||||| |||||||| |||||| || || | ||||| ||||| Sbjct 35109114 GTGAAGGGTAGACTCTTTCTGAATGTTGTAATCGGCCAAAGTCCGGCCATCTTCAAGCTG 35109173 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || |||||| |||||| | |||||||| || || || || || || || || ||| Sbjct 35109174 CTTCCCAGCAAAGATCAACCTCTGCTGATCAGGTGGGATTCCCTCCTTATC-CTGTATTT 35109232 Query 139681 TTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739 ||| ||| | | || | ||||| | | |||||||| | || | ||||| || | Sbjct 35109233 TTGCCTTAACATTATCAATGGTGTCTGAGCTTTCCACCTCCAATGTAATGGTCTTTCCTG 35109292 Query 139740 TCAACGTTTTTACGAATATTTGCAT 139764 |||| || || || || || ||||| Sbjct 35109293 TCAAAGTCTTCACAAAGATCTGCAT 35109317 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||||||| || |||| || ||||| ||||||||||| ||||| | |||| | | Sbjct 31287773 CGCAAAACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCGAGCGTGCGCCCG 31287832 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| | || ||||| || |||| || | |||||||| ||||| || || || || Sbjct 31287833 TCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGAGGGATACCCTCCTTA 31287892 Query 139670 TCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| | || | ||| | | || | || || | ||||||||| | || | Sbjct 31287893 TC-TTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCCACCTCCAAAGTAAT 31287951 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || ||||| || ||||| || || ||||| Sbjct 31287952 AGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 31287987 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATC-GCT 139596 ||||||| || | | || || |||| ||||| || || || ||||||||||| ||| Sbjct 31260254 CCGCCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAGCT 31260313 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || || ||||| || ||||| || ||| |||| || | |||||||| ||||| Sbjct 31260314 -AGGGTCCTTCCATCTTCTAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAGG 31260372 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || |||||||| || || || | | || | || || | || || || Sbjct 31260373 GATACCCTCTTTGTCCTGTATCTTGGCCTTGACATTATCAATGGTATCCGAGGATTCAAC 31260432 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | || || || ||||| || ||||||||||| ||||| Sbjct 31260433 CTCTAAGGTGATGGTTTTTCCAGTCAAAGTCTTTACGAATATCTGCAT 31260480 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/215 (69%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 139552 CAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTC 139611 |||||| || || | || || || ||||||||||||||||| | || || || Sbjct 31287319 CAAAACCAAATGGAGGGTCGATTCCTTTTGAATGTTATAATCAGCAAGGGTCCTTCCATC 31287378 Query 139612 TTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 139671 ||| ||||| ||||||||| |||| || | |||||||||||||| || || || || || Sbjct 31287379 TTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCGGGAGGGATACCCTCCTTATC 31287438 Query 139672 GGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCG 139730 ||| | || | ||| | | || | || || | ||| ||||| | || | | Sbjct 31287439 -TTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTAATAG 31287497 Query 139731 TCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || ||||| | || ||||| || ||||||||| Sbjct 31287498 TTTTTCCGGTAAGGGTCTTTACAAAAATTTGCATA 31287532 Score = 82.4 bits (90), Expect = 8e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | || | || ||||| || || ||||| || || || || || Sbjct 36294313 CGCAACACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTTCTGCCA 36294254 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| |||||||| |||||| |||| || | ||||| || || || || ||||||||| Sbjct 36294253 TCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGAATACCTTCTTTG 36294194 Query 139670 TCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || || | || | ||| | | || | || || | | ||||||||||| ||| | Sbjct 36294193 TC-CTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTGAT 36294135 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || | || || || |||||||||||| Sbjct 36294134 TGTCTTTCCAGTGAGAGTCTTCACAAATATTTGCATA 36294098 >seq7 Length=49172423 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 |||||||| | |||| || |||||||| || |||||||||||| || ||| || Sbjct 47990064 CGCAAAACGAGATGAAGAGTTGACTCTTTCTGGATGTTATAATCGGCCAATGTTCTGCCA 47990005 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| |||||||| |||||| |||| || | ||||| || || || || ||||| ||| Sbjct 47990004 TCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCAGGTGGGATCCCTTCCTTG 47989945 Query 139670 TCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| | || | || | | || | ||| |||| | ||||||||||| || | Sbjct 47989944 TC-TTGAATCTTGGCCTTGACATTGTCAATTGTATCGGAGCTCTCCACCTCAAGAGTGAT 47989886 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || || || || | || || || || |||||||| Sbjct 47989885 TGTTTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 47989850 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || ||||| | || ||||| ||||| ||||| ||||| Sbjct 47989848 CCACCACGAAGACGGAGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCTGCA 47989789 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | | |||||| ||||| || || ||| | || ||||| ||||| || ||||| Sbjct 47989788 AGGGTACGCCCGTCTTCCAGCTGCTTGCCGGCAAAAATTAGACGCTGCTGGTCTGGAGGG 47989729 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| | || | ||| | | || | ||| |||| | |||||| Sbjct 47989728 ATCCCTTCCTTGTCT-TGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCCAC 47989670 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| ||| | ||||| || || | || || || || |||||||| Sbjct 47989669 CTCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 47989622 >seq8 Length=45569985 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||||||||| | ||||| |||||||| || |||||||| || || Sbjct 6169307 CCACCACGAAGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCA 6169248 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || || || || | || || |||||| |||||| | |||||||| || || Sbjct 6169247 AGGGTCCTTCCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 6169188 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || ||||| ||||| ||||||| || | | || | |||||| | || ||| Sbjct 6169187 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTACC 6169128 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | ||||| ||||||||||| ||||| || || |||||| || Sbjct 6169127 TCTAAGGTGATGGTCTTACCGGTCAACGTCTTTACAAAGATCTGCATACCT 6169077 Score = 102 bits (112), Expect = 8e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | || | || |||||||| |||||||||||||| || || || Sbjct 35000380 CGCAACACAAGATGGAGAGTTGACTCTTTCTGAATGTTATAATCAGCCAAGGTTCTGCCA 35000439 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| |||||||| |||||| |||| || | |||||||| || || || || |||||| Sbjct 35000440 TCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGATCTGGTGGGATACCCTCTTTG 35000499 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729 || || || || | | || | ||||| | | ||||||||||| ||| | Sbjct 35000500 TCTTGTATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCCACCTCAAGGGTAATT 35000559 Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 ||||| || || | || || || |||||||||||| Sbjct 35000560 GTCTTTCCTGTGAGAGTCTTCACAAATATTTGCATA 35000595 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 139561 GTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTG 139620 ||||| || |||||||| |||||||| ||||| || || | ||||| ||||| Sbjct 6169056 GTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCCAAAGTCCGGCCATCTTCAAGCTG 6168997 Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680 || |||||| |||||| | |||||||| || || || ||||| ||||| |||||| Sbjct 6168996 CTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTTGTCCTGGATTTT 6168937 Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | || | | || | |||||| | || ||||| | ||| | ||||| ||||| Sbjct 6168936 TGCCTTCACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGATGGTCTTACCGGT 6168877 Query 139741 CAACGTTTTTACGAATATTTGCAT 139764 |||||| || || || || ||||| Sbjct 6168876 CAACGTCTTCACAAAGATCTGCAT 6168853 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | || | || ||||| || || ||||| ||||| || || || Sbjct 6168155 CGCAACACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCAGCCAAGGTTCTGCCA 6168096 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| |||||||| |||||| |||| || | ||||| || || || || || |||||| Sbjct 6168095 TCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATACCCTCTTTG 6168036 Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || || | || | ||| | | || || | || | | ||||||||||| ||| | Sbjct 6168035 TCT-TGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCACCTCAAGGGTAAT 6167977 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||||| || || | || || || |||||||||||| Sbjct 6167976 CGTCTTTCCAGTGAGAGTCTTCACAAATATTTGCATA 6167940 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606 ||||| | || | ||||| ||||||||||| |||||||| ||||| | || | Sbjct 34999921 AAACGAAGGACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGCAAGAGTCCGG 34999980 Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666 ||||||||||| || |||||| | |||| |||||||| || || || ||||| || Sbjct 34999981 CCATCTTCGAGCTGCTTTCCAGCAAAAATCAATCGTTGCTGGTCTGGGGGAATGCCCTCC 35000040 Query 139667 TTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGT 139725 ||||| ||| |||| | || | | || | ||||| | | ||| ||||| | || Sbjct 35000041 TTGTC-CTGAATTTTAGCCTTCACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAAGT 35000099 Query 139726 CACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || ||||| || | || || ||||| || |||||| Sbjct 35000100 AATTGTTTTGCCAGTAAGAGTCTTCACGAAAATCTGCATA 35000139 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || | ||||| || || || || || ||||| || ||| Sbjct 36460086 GCCACCACGAAGACGTAGGACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGC 36460027 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| |||||| | ||| || || || |||| ||||||||||| || || || Sbjct 36460026 GAGAGTGCGTCCGTCTTCCAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGG 36459967 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| || ||| | | || | |||||||| | ||| || Sbjct 36459966 AATTCCTTCCTTATCCTGGATCTTGGCTTTGACATTGTCGATTGTGTCGGAAGACTCAAC 36459907 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||| | ||| | |||||| || || | ||||| ||||| || ||||| Sbjct 36459906 CTCGAGGGTTATCGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 36459859 Score = 84.2 bits (92), Expect = 2e-11 Identities = 143/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGT 139621 |||| || || ||||| || ||||||||||| || || || ||||| ||||| Sbjct 6168599 TGAAGAGTGGATTCTTTCTGGATGTTATAATCTGCCAAGGTTCTGCCATCTTCAAGCTGC 6168540 Query 139622 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTT 139681 || |||||| | |||| | |||||| || || || |||||||| ||||| ||| | || Sbjct 6168539 TTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTC-CTGAATCTT 6168481 Query 139682 TG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | |||| | || | |||||| | | ||||||||| | || | ||| || || || Sbjct 6168480 AGCCTTTACATTGTCAATTGTGTCTGAGCTCTCCACCTCCAAAGTAATCGTTTTTCCAGT 6168421 Query 139741 CAACGTTTTTACGAATATTTGCATA 139765 | || || || || || |||||| Sbjct 6168420 TAGGGTCTTAACAAAAATCTGCATA 6168396 >seq6 Length=35275713 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609 ||||| || | ||||| || ||||||||||| ||||| |||||| | || || Sbjct 24039526 CGCAAGACAAGGTGAAGAGTTGACTCTTTTTGGATGTTGTAATCGGCAAGAGTTCTGCCA 24039467 Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669 ||||| ||||| || |||||| | || || | ||||| || || || || || || ||| Sbjct 24039466 TCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTG 24039407 Query 139670 TCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728 || ||| | || | ||| | | || | || || | | ||||||||||| ||| | Sbjct 24039406 TC-CTGAATCTTGGCTTTGACATTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGAT 24039348 Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 ||||| || || | || || ||||| |||||||| Sbjct 24039347 TGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCAT 24039312 >seq5 Length=43630510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | ||| | ||||| || || || || || ||||| || ||| Sbjct 14677269 GCCACCACGGAGACGGAGAACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGC 14677210 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | |||| |||||| |||||||| || || |||| |||||||| || || || || Sbjct 14677209 GAGAGTGCGGCCGTCTTCCAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCCGGTGG 14677150 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||||||||| ||| || ||| | | || | ||||| | | || || Sbjct 14677149 GATTCCTTCTTTGTCTTGGATCTTGGCTTTCACATTGTCGATGGTGTCTGAAGATTCAAC 14677090 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | ||| | ||||| ||||| | ||||| ||||| || ||||| Sbjct 14677089 TTCGAGGGTTATTGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 14677042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496050438850400