Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7 250 4e-61 seq276 235 8e-57 seq3 221 2e-52 seq1 205 1e-47 seq8 181 2e-40 seq4 89.7 7e-13 >seq7 Length=49172423 Score = 250 bits (276), Expect = 4e-61 Identities = 604/908 (67%), Gaps = 10/908 (1%) Strand=Plus/Plus Query 49668 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 49727 ||| || || || || ||||| || || || |||||||| || |||| | || || Sbjct 10196786 TTTCTGATACTCCCCAACACGCTTCTCAAAGAAATTAGTATTCCCTTGAAGAGAAATCAA 10196845 Query 49728 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 ||||| ||||||||||||| ||||||||||| |||| | | || | ||| | Sbjct 10196846 ATCCATCCAATCAAACGGATTCTGAACATTATAAACCTTTTCACAACCAAGATCACCCAA 10196905 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA- 49846 |||||||| || ||||| || ||||| || |||||| | ||| |||||| || | | Sbjct 10196906 TAATCTATCAGCAACAAACTCAATATAAGTACTCATCAATCCACCATTCATCCCAACCAA 10196965 Query 49847 -GTTTAACTGGAAGAGCC--GCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 49903 | || |||||||| |||| | |||||| ||||||| || |||| || Sbjct 10196966 CGCGCAA--GGAAGAGCATAGCAG--ACAAATTCACGTTCAATTTCAACAGCATTGCATA 10197021 Query 49904 TAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATG 49963 ||| | || ||| | | || | | || | || | | |||||| | Sbjct 10197022 CAATTTCCTTCACACGCTCTGAAGTTAGTTTCTTTAGTAGAAGTGAGTATAACAAACAAG 10197081 Query 49964 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGG 50023 | ||||| ||||||||||| ||||| | ||| || ||||| || || || | || | Sbjct 10197082 CAAAATCACAGTGCAGACCTTCGTCACGTGAAATAAGCTCGTTTGAGAATGTTAACCCTG 10197141 Query 50024 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG-ACCCAGAAAAGAAGATT 50082 |||||| || |||||||| | ||| || || | |||||| | || || ||||| ||| Sbjct 10197142 GCATTAAACCGCGCTTTTTCAACCAGAAAATCG-CGCAAAAGCTTCCGGAGAAGAAAATT 10197200 Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCAC 50142 |||||||| ||||| ||||| | ||| || || || |||| || ||||| Sbjct 10197201 CCTTCTACACAAGCAAATGCAACGATTCTTTCAGCAAAAGAATCGCTTGAATCAATCCAT 10197260 Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202 || |||||||| ||||| || | ||| || || || || || |||| ||| | Sbjct 10197261 TTCATTGCCCAATCAGCCTTTTTCGCGATACATGGAATTGTCTCAATTGCATGAAATAAG 10197320 Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 50262 || |||||| | ||| | | ||| || || || | ||| ||||| || ||| Sbjct 10197321 CGATTCTTTTCAGCAGAATCGCTTATATATGTTTCAATGAGAAGGGAGTACATCTCAGAA 10197380 Query 50263 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACT 50322 || ||||||||||| || || || || || ||||| | || |||| || || ||| Sbjct 10197381 TGGATGTTTTCAATTGCAATTTGGAAACCATAGAAGGCACGTGCTTCGGAGATTTGGACT 10197440 Query 50323 TCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 50382 ||| | |||| | | || | ||||||| || |||||||| ||| || || || Sbjct 10197441 TCTTTCATGAATCTTCCGGCAAGATTTTCAAGGACAATTCCGTCTGAGGCGGCGAAGAAG 10197500 Query 50383 GCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATA 50442 || | || || || || || |||| | ||| || || ||||| | |||| | Sbjct 10197501 GCAAGAACGTGAGAGATGAAGTGGCGTTCGCCGTCTGTGAGGTTGTTCCAGTGCTTGAGA 10197560 Query 50443 TCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 50502 || || | ||| |||||||| | ||||| ||||| || || || ||||| ||||| Sbjct 10197561 TCGGAGGAAAGATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATT 10197620 Query 50503 TTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGG 50562 | |||||| | | |||||||||||||| || |||| | ||| |||||||| || Sbjct 10197621 TCCCAGATTTTTGGGTATTGGATTGGGAACATGCAGAATCGGTCTGGGTTTGGTGCGAGA 10197680 Query 50563 ATCGGTTC 50570 | ||||| Sbjct 10197681 AGTGGTTC 10197688 >seq276 Length=24472 Score = 235 bits (260), Expect = 8e-57 Identities = 601/908 (66%), Gaps = 10/908 (1%) Strand=Plus/Minus Query 49668 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 49727 ||| || || || || ||||| || || || ||||| || || |||| | || || Sbjct 23302 TTTCTGATACTCCCCAACACGCTTCTCAAAGAAATTCGTCTTCCCTTGAAGGGAAATCAA 23243 Query 49728 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 ||||| ||||||||||||| ||||||||||| |||| | | || | ||| | Sbjct 23242 CTCCATCCAATCAAACGGATTCTGAACATTATAAACCTTTTCACAACCAAGCTCACCCAA 23183 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA- 49846 |||||||| || ||||| || ||||| || |||||| | ||| |||||| || | | Sbjct 23182 TAATCTATCAGCAACAAACTCAATATAAGTACTCATCAATCCACCATTCATCCCAACCAA 23123 Query 49847 -GTTTAACTGGAAGAGCC--GCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 49903 | || ||||| || |||| | |||||| ||||||| || |||| || Sbjct 23122 CGCGCAA--GGAAGTGCTTTGCAG--ACAAATTCACGTTCAATTTCAACAGCATTGCATA 23067 Query 49904 TAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATG 49963 ||| | || ||| | | || | || | || | | |||||| | Sbjct 23066 CAATTTCCTTCACACGCTCTGAAGTTAGTTTCTTTTGTAGAAGTGAGTATAACAAACAAG 23007 Query 49964 CGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGG 50023 | ||||| ||||||||||| ||||| | ||| || ||||| || || || | || | Sbjct 23006 CAAAATCACAGTGCAGACCTTCGTCACGTGAAATAAGCTCGTTTGAGAATGTTAACCCTG 22947 Query 50024 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC-CCAGAAAAGAAGATT 50082 |||||| || |||||||| | ||| || || | |||||| | || || ||||| ||| Sbjct 22946 GCATTAAACCGCGCTTTTTCAACCAGAAAATCG-CGCAAAAGCTTCCGGAGAAGAAAATT 22888 Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCAC 50142 |||||||| ||||| ||||| | ||| || || || |||| || ||||| Sbjct 22887 CCTTCTACACAAGCAAATGCAACGATTCTTTCAGCAAAAGAATCGCTTGAATCAATCCAT 22828 Query 50143 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 50202 || |||||||| ||||| || | ||| || || || || || |||| ||| | Sbjct 22827 TTCATTGCCCAATCAGCCTTTTTCGCGATACATGGAATTGTCTCAATTGCATGAAATAAG 22768 Query 50203 TAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAA 50262 || |||||| | ||| | | ||| || || || | ||| ||||| || ||| Sbjct 22767 CGATTCTTTTCAGCAGAATCGCTTATATATGTTTCAATGAGAAGGGAGTACATCTCAGAA 22708 Query 50263 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACT 50322 || ||||||||||| || || || || || ||||| | || |||| || || ||| Sbjct 22707 TGGATGTTTTCAATTGCAATTTGGAAACCATAGAAGGCACGTGCTTCGGAGATTTGGACT 22648 Query 50323 TCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 50382 ||| | |||| | | || | ||||||| || |||||||| ||| || || || Sbjct 22647 TCTTTCATGAATCTTCCGGCAAGATTTTCAAGGACAATTCCGTCTGAGGCGGCGAAGAAG 22588 Query 50383 GCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATA 50442 || | || || || || || |||| | ||| || || ||||| | |||| | Sbjct 22587 GCAAGAACGTGAGAGATGAAGTGGCGTTCGCCGTCTGTGAGGTTGTTCCAGTGCTTGAGA 22528 Query 50443 TCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATA 50502 || || | ||| |||||||| | ||||| ||||| || || || ||||| ||||| Sbjct 22527 TCGGAGGAAAGATCAACTTCTTCGGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATT 22468 Query 50503 TTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGG 50562 | |||||| | | |||||||||||||| || |||| | ||| |||||||| || Sbjct 22467 TCCCAGATTTTTGGGTATTGGATTGGGAACATGCAGAATCGGTCTGGGTTTGGTGCGAGA 22408 Query 50563 ATCGGTTC 50570 | ||||| Sbjct 22407 AGTGGTTC 22400 >seq3 Length=55515152 Score = 221 bits (244), Expect = 2e-52 Identities = 606/921 (66%), Gaps = 8/921 (1%) Strand=Plus/Plus Query 79621 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAG 79680 ||||| || ||||| || || ||| | | | | ||| || ||||| |||||||| Sbjct 2060475 GATGCAAGGTTACACACAGCAGTCTCTGTTGGACTTGTATACTGGATTATCTCAGTGCAC 2060534 Query 79681 AGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 79740 || || ||||||| || || | ||| || || || || || | || || | |||| Sbjct 2060535 AGATTTGATGACTTAATTGTGCCCAGATTCTGCTGGTTGCTTTTCCTATTGCAAGTATCC 2060594 Query 79741 TTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 79800 ||| |||| ||| | ||| | |||||||| ||||| || | | ||| || ||| | | Sbjct 2060595 TTAAAAAGCATGTAAGGATTTCCAGTTTCTATCTGTGACTTCAAAATTGCAAACCACA-G 2060653 Query 79801 ACTCGAGCCTTTATTATAGACTTGTAT-CTCTT--TTCTCTTTCGTATTGTGTATATAAT 79857 | || ||| | | | ||| | | || || | || |||| || || || || | Sbjct 2060654 AGTCCGTGCTTGA--ACAATCTTTTTTGCTTTTCCTGCTTTTTCATACTGAGTGTACAGC 2060711 Query 79858 CGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAAC 79917 || || || || |||||| ||| | || ||||| ||| | || || | || Sbjct 2060712 TTATCAAATTCTTCACCCCAACAATCTGCCAAACCAGGTGCTTCATTGGGGCAGAACAGG 2060771 Query 79918 GACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 79977 ||||| || ||||| | ||| || ||||||||||||||| | |||||| || | Sbjct 2060772 GACCATTCCCCATCGCTCAGAGCTCTTTCCATAAAGAGATCAGGCACCCAAAGGGCGTAA 2060831 Query 79978 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 80037 |||| ||||| | | ||||| || ||||| ||| |||| | || ||||| | Sbjct 2060832 AATAAATCTCGAGCACGTTGCTCTTCCTTTCCATGATTTATTTTCAATTCCAGGAAGTCA 2060891 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | ||||||| |||||| || |||||||| | || | | | || | ||| ||| Sbjct 2060892 AATATATCAGCATGCCATGGCTCCAAGTACACAGCAAAAGCACCTTTCCTCTTGCCTCCC 2060951 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 |||||||| | || | || || | ||| | || | | ||| |||| ||||||||| Sbjct 2060952 CCCTGATCAACATAACGTGCAGTATCATTGAACACACGAAGCATCGGAACAATACCATTA 2061011 Query 80158 GATGTACCA-TTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAG 80216 || || ||| ||| |||| || || || || || |||||| ||||| || || | Sbjct 2061012 GACGTTCCATTTGTTCCCCGA-ATGTAACTACCTTGGGCACGTATATTGTGAACAGAAAC 2061070 Query 80217 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCC 80276 ||| || || || || |||| || | || || || || |||||||| || || Sbjct 2061071 ACCAATCCCTCCAGCAGATTTACTAATGACAGCACACTCCTTCAATGTATCATAAATCCC 2061130 Query 80277 CTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT 80336 ||| || ||||| || ||||| || | || || ||| || || | | | || Sbjct 2061131 CTCAATACTATCCTCTTTCATGCAAACCAAGAAGCAACTACTCAACTGAGGCCTAGGTGT 2061190 Query 80337 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTA 80396 ||| || || || | ||||||||||| || || |||||| | | ||||| | || || Sbjct 2061191 TCCGGCGTTGAAAAGTGTAGGAGAAGCATGAGTGAACCATCTCTGAGACATGAAATGATA 2061250 Query 80397 CGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACAT 80456 || | | ||| ||||| | ||| || |||||||| || | || | ||||| ||| Sbjct 2061251 AGTTTTGACAGCAGATTCAACATCATCTTTGTGAATTCCAACAGAAACCCTCATTATCAT 2061310 Query 80457 GTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGT 80516 || ||||||||||| || | | | | |||||||| ||||| |||| | || Sbjct 2061311 ATGTTGAGGTCTTTCCACAACCACTCCTTCAACTTTCAACAGATAAGACCTTTCTAGGGT 2061370 Query 80517 TTTAAAACCAAAATAGTTGTA 80537 ||| || ||||| || | ||| Sbjct 2061371 TTTGAATCCAAAGTAATCGTA 2061391 >seq1 Length=52991155 Score = 205 bits (226), Expect = 1e-47 Identities = 594/907 (65%), Gaps = 8/907 (1%) Strand=Plus/Minus Query 49668 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 49727 ||| || || || || || || || || |||||||| |||||||| | | || || Sbjct 19457813 TTTCTGATACTCCCCAACGCGCTTCTCAAAAAAATTGGTTTTTCCCTGAAGCGAAATCAA 19457754 Query 49728 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 |||||| ||||||||||||| |||||| |||| |||| | | || | ||| | Sbjct 19457753 TTCCATCCAATCAAACGGATTCTGAACATTGTAAACCTTTTCACAACCAAGCTCACCCAA 19457694 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA- 49846 || ||||| || ||||| || ||||| || |||||| | | |||||| || | | Sbjct 19457693 TAACCTATCAGCAACAAACTCAATATACGTACTCATCAAACCCCCATTCATCCCAACCAA 19457634 Query 49847 -GTTTAACTGGAAGAGCCGCAGTA-AGAAATTCTTGTTCAATGGATACCGCATCTGTTAT 49904 | || ||||| || | | | | ||| || |||||| || ||||| | Sbjct 19457633 CGCGCAA--GGAAGCGC-GTGGCACACAAACTCCCTTTCAATTTCAACAGCATCACAAAC 19457577 Query 49905 AATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGC 49964 ||| | | ||| ||| ||| | | || | || | | |||||| || Sbjct 19457576 AATTTCTTTCACGCGCTCTGAACTTAGCTTCTTTCGTAGAAGTGAGTATAACAAACAAGC 19457517 Query 49965 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGG 50024 |||||| ||||||| || ||||| | ||| || ||||| || || || | ||| || Sbjct 19457516 GAAATCACAGTGCAATCCTTCGTCGCGTGAAATAAGCTCGTTTGAGAAGGTTAATCCCGG 19457457 Query 50025 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC-CCAGAAAAGAAGATTC 50083 ||||| || |||||||| | ||| || || | | || | | || || || ||||||| Sbjct 19457456 CATTAAACCGCGCTTTTTCAACCAGAAAATCG-CACAGAAGCTTCCGGAGAAAAAGATTC 19457398 Query 50084 CTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTATCCACT 50143 |||| || ||||| ||||| | ||| ||| || || |||| || ||||| | Sbjct 19457397 CTTCAACACAAGCAAACGCAACGATTCTTTCTGCAAAAGAATCGCTTGAATCGATCCATT 19457338 Query 50144 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 50203 | |||||||| || ||||| | ||| || || ||||| || |||| ||| | Sbjct 19457337 TCATCGCCCAATCAGCTTTCTTCGCGATACATGGAATTGTTTCAATTGCATGAAATAAGC 19457278 Query 50204 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 50263 || |||||| ||| | | ||| || |||| | |||| |||||| || || | Sbjct 19457277 GATTCTTTTCAGCGGAATCGCTTATATACGTTTCGAGGAGAAGAGAATACATCTCAGAGT 19457218 Query 50264 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 50323 | ||||||||||| || ||||| || |||||||| | || || | | || | || Sbjct 19457217 GGATGTTTTCAATTGCAATCTGGAAACCGTAGAAGGCACGTGCTTCAGAGACTTGGATTT 19457158 Query 50324 CTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACG 50383 || | ||||| | || | ||||||| || || ||||| ||| || || || | Sbjct 19457157 CTTTCATAAATCTACCGGCGAGATTTTCAAGGACGATGCCGTCGGAGGCAGCGAAGAAGG 19457098 Query 50384 CCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATAT 50443 | | ||||| || || || |||| | || || || | ||| | |||| || Sbjct 19457097 CGAGGACATGAGAGATGAAGTGGCGTTCGCCGTCGGTGAGGTTTTGCCAGTGCTTGAGAT 19457038 Query 50444 CTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 50503 | || | ||| |||||||| | ||||| ||||| || || || ||||| ||||| | Sbjct 19457037 CGGAGGAAAGATCGACTTCTTCAGCGGTCCAGAATGAGGCTTCGGCTTTTTTGTACATTT 19456978 Query 50504 TCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGA 50563 |||||| | | |||||||||||||| || |||| | ||| ||||| ||||| | Sbjct 19456977 CCCAGATTTTTGGGTATTGGATTGGGAACATGCAGAATCGGTCTGGGTTTGGGGCAAGAA 19456918 Query 50564 TCGGTTC 50570 ||||| Sbjct 19456917 GGGGTTC 19456911 >seq8 Length=45569985 Score = 181 bits (200), Expect = 2e-40 Identities = 595/913 (65%), Gaps = 20/913 (2%) Strand=Plus/Plus Query 49668 TTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATT 49727 ||| || || || || || || || || || ||||| ||||| || | | || || Sbjct 25025278 TTTCTGATACTCCCCAACGCGCTTCTCAAAGAAATTGGTTTTCCCCTGAAGCGAAATCAA 25025337 Query 49728 TTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAAT 49787 ||||| ||||||| ||||| ||||||||||| ||| | | | || | ||| | Sbjct 25025338 ATCCATCCAATCAAATGGATTCTGAACATTATAAACTTTCTCACAACCAAGCTCACCCAA 25025397 Query 49788 CAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAA- 49846 || ||||| || ||||| || ||||| |||||| ||||| ||||| || | | Sbjct 25025398 TAACCTATCAGCAACAAACTCAATATACTGACTCATCAATTCACCGTTCATCCCAACCAA 25025457 Query 49847 -GTTTAACTGGAAGAGC--CGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTA 49903 | || ||||| || |||| | ||| || |||||| |||||||| | Sbjct 25025458 CGCGCAA--GGAAGCGCGTCGCAT--ACAAACTCCCTTTCAATCTCAACCGCATCACGAA 25025513 Query 49904 TAATAGATCTAACGGTTTCTTCACTCGGTG---GATGCAATAAAT-GTTTAAACATCAAA 49959 ||| ||| ||| |||| || || |||||| || ||| |||| Sbjct 25025514 CAATCTTCACCACGCGCTCTGTACTCAGTTTCTGACGCAATAGCGAGTATAA----CAAA 25025569 Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || ||||| ||||| | || ||||| | ||| || ||||| || || || | | Sbjct 25025570 CAAGCAAAATCACAGTGTAAGCCTTCGTCGCGTGAAATAAGCTCGTTTGAGAAAGTTAAT 25025629 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAC-CCAGAAAAGAA 50078 || ||||||| || || ||||| | ||| || || | | || | | || || ||||| Sbjct 25025630 CCCGGCATTAAACCGCGTTTTTTCAACCAGAAAATCG-CACAGAAGCTTCCGGAGAAGAA 25025688 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCATGTAT 50138 |||||||| || || || ||||| | ||| ||| || || |||| || || Sbjct 25025689 AATTCCTTCAACACAAGCGAAAGCAACGATTCTTTCTGCAAAAGAATCGCTTGAATCGAT 25025748 Query 50139 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 50198 ||| || ||||||||| || ||||| | ||| || || || || || || | ||| Sbjct 25025749 CCATTTCAAAGCCCAATCAGCTTTCTTAGCAATACACGGAATTGTGTCAATTGCGTGAAA 25025808 Query 50199 GAGATAGttt-ttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTT 50257 | || | || |||||| | ||| | | ||| || |||| | |||| |||||| | Sbjct 25025809 TA-ATCGATTCTTTTCAGCAGAATCGCTTATATACGTTTCGAGGAGAAGAGAATACATCT 25025867 Query 50258 CCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 50317 | || || ||||||||||| || || ||||| ||||||||| | || || | || | Sbjct 25025868 CTGAGTGGATGTTTTCAATAGCGATTTGAAACCCGTAGAAAGCACGCGCTTCAGAGATTT 25025927 Query 50318 GCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAA 50377 | |||||| | |||| | | || | |||||| || || ||||| ||| || | Sbjct 25025928 GAACTTCTTTCATGAATCTTCCGGCGAGATTTTCGAGGACGATACCGTCGGAGGCGGCGA 25025987 Query 50378 AAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCAT 50437 | || || | | || || || || |||| | || || || ||||| | | Sbjct 25025988 AGAAGGCGAGGATGTGAGAGATGAAGTGGCGTTCGCCGTCGGTGAGGTTGTTCCAGTGTT 25026047 Query 50438 TGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTAT 50497 | ||| || | ||| |||||||| | ||||| || || || || || ||||| | Sbjct 25026048 GAAGATCGGAGGAAAGATCGACTTCTTCGGCGGTCCAGAAAGAGGCTTCGGCTTTTTTGT 25026107 Query 50498 ACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTG 50557 |||| | |||||| | | |||||||||||||| ||| |||| | ||| ||||| | Sbjct 25026108 ACATTTCCCAGATTTTTGGGTATTGGATTGGGAACATACAGAATCGGTCTGGGTTTGGAG 25026167 Query 50558 CAAGGATCGGTTC 50570 | || | ||||| Sbjct 25026168 CGAGAAGAGGTTC 25026180 >seq4 Length=56582383 Score = 89.7 bits (98), Expect = 7e-13 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || ||||| ||||| ||||||||||||||| ||||| || || || || || || Sbjct 48679912 CAAGCAAAATCACAGTGAAGACCCTCGTCTCTAGAGATTAGCTCATTTGAGAATGTCAGA 48679971 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG 50056 || ||||||| || | |||||||||||||||||||| Sbjct 48679972 CCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATGG 48680008 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718249164326680