Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_004683.1 Length=57050 Score E Sequences producing significant alignments: (Bits) Value seq1130 102 3e-17 >seq1130 Length=2756 Score = 102 bits (112), Expect = 3e-17 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48618 TGGGTGATCGTCGGCGGCGAGAGCGGACCTGGTGCCCGGCCGATGCACCCCGACTGGGCC 48677 |||||||| ||||||||| ||||| | || || || |||||||| ||||| |||| Sbjct 2474 TGGGTGATTTGCGGCGGCGAAAGCGGGCATGCCGCGCGCCCGATGCATCCCGATTGGGTT 2533 Query 48678 CGCGGACTCCGCGACCAATGCACGGCGGCCGGTGTGCCGTTCCTGTTCAAGCAGTGGGG 48736 |||| || ||||| || ||||||||||| || || ||||| |||||||||| ||||| Sbjct 2534 CGCGCGCTGCGCGATCAGTGCACGGCGGCAGGCGTCCCGTTTTTGTTCAAGCAATGGGG 2592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182433661960728