Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_006636.1 Length=15876 Score E Sequences producing significant alignments: (Bits) Value seq295 122 9e-24 >seq295 Length=22608 Score = 122 bits (134), Expect = 9e-24 Identities = 122/157 (78%), Gaps = 16/157 (10%) Strand=Plus/Plus Query 12995 TTTGAACTaaaaaaaaTCCACAAGTATAATTTAGATGAAAAATATGAA----------GG 13044 |||| || |||||||||| || ||||||||| |||||||||||||| | Sbjct 21460 TTTGGAC-AAAAAAAATCAACTCTTATAATTTAAATGAAAAATATGAAAATATATCACGT 21518 Query 13045 AAATAAAATATTTGTAACGTGATTGGTCAAATATATCATAAGCATGAAAATATATATAAT 13104 || ||| |||| ||||||||||||||| |||||||||||||||||||||||||| || Sbjct 21519 AAGCAAACTATTCGTAACGTGATTGGTCGAATATATCATAAGCATGAAAATATATGCAA- 21577 Query 13105 TCTATACTAACATTCAGTTGCGCGCTTGCGCGCGCAA 13141 || |||| | ||| |||||||||||||||||| Sbjct 21578 ---ATCCTAA-ACTCATGCGCGCGCTTGCGCGCGCAA 21610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50683518323959