Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq7 93.3 5e-15 >seq7 Length=49172423 Score = 93.3 bits (102), Expect = 5e-15 Identities = 112/150 (75%), Gaps = 7/150 (5%) Strand=Plus/Plus Query 5989 AAATTTTCGACTAGAGGATCTTTGTCAATAATTTAAGGGCATTATCTTCAAGTCAAAAAC 6048 |||||||| | || |||||||||| | ||||||| |||| | | | |||| | || Sbjct 34156461 AAATTTTC---TTGAAGATCTTTGTCGAAAATTTAAAGGCAGTTT-TCAAAGTTGATAAG 34156516 Query 6049 CGGGATGTCAATTTAACTTAAAATAAGAGTCAACACTATCATTAGCAGTTATTCTGCATA 6108 | | |||||||||||||| || ||| ||||||||||| |||| ||||||| |||| Sbjct 34156517 CTTAAAGTCAATTTAACTTATCATCAGAATCAACACTATCGTTAGTGGTTATTCAGCATC 34156576 Query 6109 AC---TTTTTCCAGCGGAAGTGCATTGCTT 6135 || || | ||||||||||| ||| ||| Sbjct 34156577 ACACATTGCTTCAGCGGAAGTGTATTCCTT 34156606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61195252505044