Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq2187 627 2e-175 seq4 627 2e-175 seq7 621 1e-173 seq1 612 5e-171 seq10 590 2e-164 seq3 215 1e-51 seq2 168 2e-37 >seq2187 Length=124033 Score = 627 bits (694), Expect = 2e-175 Identities = 736/990 (74%), Gaps = 4/990 (0%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 122539 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 122598 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| |||| || |||||||| || Sbjct 122599 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCT 122658 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || |||||||| ||||| || || || | |||||||||||| Sbjct 122659 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAAT 122718 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || || || || |||||||||| ||||| Sbjct 122719 ATTATTTCTGGTGCCATTATTCCTACTTCGGCGGCTATCGGTTTGCACTTTTACCCGATA 122778 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| |||||||||||||||||||| ||| |||| |||| Sbjct 122779 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 122838 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||||||| | || ||||| ||| ||| | |||||||||| || | Sbjct 122839 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGT 122898 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| || | |||| ||| ||| Sbjct 122899 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCA 122958 Query 19710 GTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | |||||| |||| ||||| || ||| |||||||||||||| || || Sbjct 122959 GT-TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAAT 123017 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 ||| |||||||| ||||||||| | ||||| || || || || ||||| ||||||||||| Sbjct 123018 CTCCGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCC 123077 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 || |||||| | ||||| ||||| |||||||| || || || || |||||||||||| Sbjct 123078 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGG 123137 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| || | || Sbjct 123138 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 123197 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | ||||| ||||| ||||| || ||||||||||| ||||| || || || ||||| Sbjct 123198 TTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGG 123257 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || ||||||||| |||||| ||||||||||||||||||||||| || || Sbjct 123258 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGC 123317 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 | ||| || || || || || ||| ||||| | | || ||| |||||||||||||||| Sbjct 123318 TGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAA 123377 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 | | |||||||| ||||||||||| || ||||||||| ||||| || |||| | Sbjct 123378 CTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAA-GGTCGTGTAATTAACA 123436 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | || | |||||||| || | ||||||||||| || || |||| Sbjct 123437 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 123496 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTCGG 20277 ||||||||||||| || || ||||| ||| Sbjct 123497 CTCATAACTTCCCTCTAGACCTAGCTGCGG 123526 >seq4 Length=56582383 Score = 627 bits (694), Expect = 2e-175 Identities = 736/990 (74%), Gaps = 4/990 (0%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 18304208 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 18304267 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| |||| || |||||||| || Sbjct 18304268 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCT 18304327 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || |||||||| ||||| || || || | |||||||||||| Sbjct 18304328 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAAT 18304387 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || || || || |||||||||| ||||| Sbjct 18304388 ATTATTTCTGGTGCCATTATTCCTACTTCGGCGGCTATCGGTTTGCACTTTTACCCGATA 18304447 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| |||||||||||||||||||| ||| |||| |||| Sbjct 18304448 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 18304507 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||||||| | || ||||| ||| ||| | |||||||||| || | Sbjct 18304508 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGT 18304567 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| || | |||| ||| ||| Sbjct 18304568 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCA 18304627 Query 19710 GTGTTTCTCG-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | |||||| |||| ||||| || ||| |||||||||||||| || || Sbjct 18304628 GT-TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAAT 18304686 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 ||| |||||||| ||||||||| | ||||| || || || || ||||| ||||||||||| Sbjct 18304687 CTCCGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCC 18304746 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 || |||||| | ||||| ||||| |||||||| || || || || |||||||||||| Sbjct 18304747 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGG 18304806 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| || | || Sbjct 18304807 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 18304866 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | ||||| ||||| ||||| || ||||||||||| ||||| || || || ||||| Sbjct 18304867 TTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGG 18304926 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || ||||||||| |||||| ||||||||||||||||||||||| || || Sbjct 18304927 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGC 18304986 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 | ||| || || || || || ||| ||||| | | || ||| |||||||||||||||| Sbjct 18304987 TGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAA 18305046 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 | | |||||||| ||||||||||| || ||||||||| ||||| || |||| | Sbjct 18305047 CTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAA-GGTCGTGTAATTAACA 18305105 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | || | |||||||| || | ||||||||||| || || |||| Sbjct 18305106 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 18305165 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTCGG 20277 ||||||||||||| || || ||||| ||| Sbjct 18305166 CTCATAACTTCCCTCTAGACCTAGCTGCGG 18305195 Score = 168 bits (186), Expect = 2e-37 Identities = 210/288 (73%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 18031111 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 18031052 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| | ||||| |||| || |||||||| || Sbjct 18031051 ATGATCCCTACCTTATTGACCGCAACTTCCGTATTTATTATCGCTTTCATCGCAGCTCCT 18030992 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || |||||||| ||||| || || || | |||||||||||| Sbjct 18030991 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAAT 18030932 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || || || || |||||||||| || || Sbjct 18030931 ATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCAATA 18030872 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATAT 19577 |||||||| | | | ||||| ||||||||||||| || || |||| Sbjct 18030871 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGACGATCGATAT 18030824 Score = 138 bits (152), Expect = 3e-28 Identities = 193/268 (72%), Gaps = 7/268 (3%) Strand=Plus/Minus Query 19335 TGGTTTGGAGTACTTATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCC 19394 |||||||| || | ||||| ||| |||| | || ||| || ||| | |||| Sbjct 525768 TGGTTTGGTGTTTTGATGATCCCTACCTTATCGACCGCAACTTCTGTATTTCTTATCGCT 525709 Query 19395 TTTATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTA 19454 || |||||||| || || |||| ||| ||||| || |||||||| ||||| || || | Sbjct 525708 TTCATCGCAGCCCCTCCAGTAGTTATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCAA 525649 Query 19455 ATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTG 19514 | |||||||| |||||||||| ||| || | ||||| | || || || | || Sbjct 525648 CTTTACGGAAATAATATTATTTATGGTGCCATTGTTCCTACTTCTGCGGCTATCAGTTTG 525589 Query 19515 CACTTTTATCCGATCTGGGAAGCCGGCACTT-TAGATGAGTGGTTATACAACGGCGGTCC 19573 |||||||| ||||| |||||||| | || || | ||||| |||| |||||||||||||| Sbjct 525588 CACTTTTACCCGATATGGGAAGCTG-CATTTGTTGATGAATGGTCATACAACGGCGGTC- 525531 Query 19574 ATATCAACTTGTTGTCTTCCACTTCTTA 19601 | ||| |||| | ||||||||| Sbjct 525530 ----CTACTAATTGTTCTACACTTCTTA 525507 >seq7 Length=49172423 Score = 621 bits (688), Expect = 1e-173 Identities = 735/990 (74%), Gaps = 4/990 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 6942878 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 6942819 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| |||| || |||||||| || Sbjct 6942818 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCT 6942759 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || |||||||| ||||| || || || | |||||||||||| Sbjct 6942758 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAAT 6942699 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || | || || |||||||||| ||||| Sbjct 6942698 ATTATTTCTGGTGCCATTATTCCTACTTCGGCGACTATCGGTTTGCACTTTTACCCGATA 6942639 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| |||||||||||||||||||| ||| |||| |||| Sbjct 6942638 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTT 6942579 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | ||||||||| | || ||||| ||| ||| | |||||||||| || | Sbjct 6942578 CTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGT 6942519 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 | || ||| | || ||||| || |||||| |||| || | |||| ||| ||| Sbjct 6942518 CTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCA 6942459 Query 19710 GTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 || ||||| | | |||||| |||| ||||| || ||| |||||||||||||| || || Sbjct 6942458 GT-TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAAT 6942400 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 ||| |||||||| ||||||||| | ||||| || || || || ||||| ||||||||||| Sbjct 6942399 CTCCGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCC 6942340 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 || |||||| | ||||| ||||| |||||||| || || || || |||||||||||| Sbjct 6942339 ATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGG 6942280 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| ||||| | |||| |||||| || || ||| ||| || | || Sbjct 6942279 TTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 6942220 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 || | ||||| ||||| ||||| || ||||||||||| ||||| || || || ||||| Sbjct 6942219 TTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGG 6942160 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 ||||||| || ||||||||| |||||| ||||||||||||||||||||||| || || Sbjct 6942159 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGC 6942100 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 | ||| || || || || || ||| ||||| | | || ||| |||||||||||||||| Sbjct 6942099 TGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAA 6942040 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 | | |||||||| ||||||||||| || ||||||||| ||||| || |||| | Sbjct 6942039 CTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAA-GGTCGTGTAATTAACA 6941981 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | || | |||||||| || | ||||||||||| || || |||| Sbjct 6941980 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 6941921 Query 20248 CTCATAACTTCCCACTTGATTTAGCTTCGG 20277 ||||||||||||| || || ||||| ||| Sbjct 6941920 CTCATAACTTCCCTCTAGACCTAGCTGCGG 6941891 Score = 334 bits (370), Expect = 2e-87 Identities = 499/701 (71%), Gaps = 8/701 (1%) Strand=Plus/Minus Query 19561 ACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGCAGCATACG 19620 ||||| || ||| ||| |||| |||| | ||||||||| | || ||||| | | Sbjct 5597358 ACAACAGCAATCCTTATGAACTAATTGTTATACACTTCTTACTTGGTGTAGCTTGTTCCA 5597299 Query 19621 CTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTCGTAGCAT 19680 ||| | |||||||||| | || | | || ||| | || ||||| | | |||| Sbjct 5597298 TCGGTCGTGAGTGGGAACTGTTTTC--GTCTGGGTATGCGCCCTTGGATTGTTATTGCAT 5597241 Query 19681 ATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCGTT-TACCCATTTGGGCAAGGG 19739 || ||| || | |||| ||| ||| || ||||| | | |||||| |||| ||||| Sbjct 5597240 ATTCAGTTCCTGTTGCAGCTGCTAGTGCAGT-TTTCTTGATCTACCCAATTGGTCAAGGA 5597182 Query 19740 AGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTC 19799 || ||| |||||||||||||| || |||| ||||||||| ||||||| | | ||||| Sbjct 5597181 AGCTTTTCAGATGGTATGCCTCTAGGAATCTATGGTACTTTCAACTTTACGATTGTATTT 5597122 Query 19800 CAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTC 19859 || | || || ||||| ||||||||| | || |||||| | ||||| ||||| ||||| Sbjct 5597121 CAGGTTGAGCATAATATTCTTATGCATTCATTTCACATGTTAGGTGTAGCTGGTGTATTT 5597062 Query 19860 GGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAGGAA 19919 | || || || || | |||||| ||| | ||||| || ||||||||| Sbjct 5597061 GACGGTTCCCTATTTAGTAATATGCATTCTTCCTTGTTAACTTCTA--ATAATCAAGGAA 5597004 Query 19920 ACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATAT 19979 || | | ||| ||| || | || || | ||||| ||||| ||||| || ||| Sbjct 5597003 ACCATAAAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTAT 5596944 Query 19980 AATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAAT 20039 |||||||| | ||| | || || ||||| ||||||| || ||||||||| |||||| Sbjct 5596943 AATATTGTAGTTGCTTATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCAAC 5596884 Query 20040 AATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACC 20099 ||||||||||||||||||||||| || ||| ||| || | || || || | | ||||| Sbjct 5596883 AATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTATAGTAGGTATCTAGTTTACC 5596824 Query 20100 TCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTA 20159 | || ||| |||||| |||||||| | |||||||| || ||| |||| |||||| Sbjct 5596823 GCGTAAGGTATCAACACTATAGCTTTCAATTTAAATGGTTTCAATTTTTACCAATCAGTA 5596764 Query 20160 GTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCT 20218 |||||| ||||| || |||| || ||||||||| | | | | | |||||| Sbjct 5596763 GTTGATAGTCAA-GGTTGTGTAATTAACACCTGGGCTGATATTGTTGACCGTGTTAACCT 5596705 Query 20219 CGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTTCC 20259 || | ||||||||||| || || |||||||||||||||| Sbjct 5596704 TGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCC 5596664 >seq1 Length=52991155 Score = 612 bits (678), Expect = 5e-171 Identities = 731/987 (74%), Gaps = 4/987 (0%) Strand=Plus/Minus Query 19293 TGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATG 19352 ||| | ||| | || || || || ||||| ||||| | || |||||||| || | ||| Sbjct 38651366 TGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATG 38651307 Query 19353 ATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCT 19412 || ||| |||| | | || ||| || ||||| |||| || |||||||| || || Sbjct 38651306 ATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCA 38651247 Query 19413 GTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATT 19472 |||||||| ||||| || |||||||| ||||| || || || | | ||||||||||||| Sbjct 38651246 GTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTCCGGAAACAATATT 38651187 Query 19473 ATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGG 19532 |||||||| || | |||| | || || || || |||||||||| ||||| ||| Sbjct 38651186 ATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGG 38651127 Query 19533 GAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTC 19592 ||||| | | | ||||| |||||||||||||||||||| ||| |||| |||| | Sbjct 38651126 GAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTA 38651067 Query 19593 CACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTA 19652 ||||||||| | || ||||| ||| ||| | |||||||||| || | | Sbjct 38651066 CACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTG 38651007 Query 19653 GGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTG 19712 || ||| | || ||||| | || |||||| |||| || | |||| ||| ||| || Sbjct 38651006 GGTATGCGCCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGT- 38650948 Query 19713 TTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTC 19771 ||||| | | |||||| |||| ||||| || ||| |||||||||||||| || ||||| Sbjct 38650947 TTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTC 38650888 Query 19772 TGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTT 19831 ||||||||| ||||||||| | ||||| || || || || ||||| ||||||||||| || Sbjct 38650887 TGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATT 38650828 Query 19832 CCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAG 19891 |||||| | ||||| ||||| |||||||| || || || || |||||||||||| Sbjct 38650827 TCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTC 38650768 Query 19892 TTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTA 19951 ||||| ||||| | |||| |||||| || || ||| ||| || | || || Sbjct 38650767 CTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 38650708 Query 19952 TAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAG 20011 | ||||| ||||| ||||| || ||||||||||| ||||| || || || ||||| | Sbjct 38650707 CAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCG 38650648 Query 20012 ATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTAC 20071 ||| || || ||||||||| |||||| ||||||||||||||||||||||| || ||| | Sbjct 38650647 ATTAATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGC 38650588 Query 20072 TTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCT 20131 || || || || || || || ||||| | | || ||| ||||||||||||||||| | Sbjct 38650587 TTGGCCTGTAGTAGGTATCTGATTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTT 38650528 Query 20132 TAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACAT 20190 |||||||| ||||||||||| || ||||||||| ||||| || |||| || | Sbjct 38650527 AAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAA-GGTCGTGTAATTAACACCT 38650469 Query 20191 GGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTC 20250 |||||||| | | || | |||||||| || | ||||||||||| || || ||||||| Sbjct 38650468 GGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTC 38650409 Query 20251 ATAACTTCCCACTTGATTTAGCTTCGG 20277 ||||||| || || || ||| | ||| Sbjct 38650408 ATAACTTTCCTCTAGACCTAGTTGCGG 38650382 Score = 196 bits (216), Expect = 1e-45 Identities = 237/323 (73%), Gaps = 0/323 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || | || || ||||| ||||| | || |||||||| || | Sbjct 25175195 TTCTGTAACTGGATAACCAACACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 25175136 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| |||| || |||||||| || Sbjct 25175135 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCT 25175076 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || |||||||| ||||| || || || | |||||||||||| Sbjct 25175075 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAAT 25175016 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || | || || |||||||||| ||||| Sbjct 25175015 ATTATTTCTGGTGCCATTATTCCTACTTCGGCGACTATCGGTTTGCACTTTTACCCGATA 25174956 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | | | ||||| ||||||||||||||||||| ||| |||| |||| Sbjct 25174955 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCATTATGAACTAATTGTT 25174896 Query 19590 TTCCACTTCTTAATAGGAGTAGC 19612 | ||||||||| | || ||||| Sbjct 25174895 CTACACTTCTTACTTGGTGTAGC 25174873 >seq10 Length=496089 Score = 590 bits (654), Expect = 2e-164 Identities = 725/985 (74%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || || || || ||||| | || ||||| || || | ||||| ||| Sbjct 201337 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 201278 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | || ||| || ||||| ||||||| ||||| || || || |||||| Sbjct 201277 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGAT 201218 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || ||||| || || ||||| ||||| || || ||| | || |||||||||||||| ||| Sbjct 201217 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 201158 Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538 || || | |||| | || || || ||| |||||||||| || || |||||||| Sbjct 201157 GGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCT 201098 Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTC 19598 | || | ||||||||||||||||| || ||||| ||| | || |||| | |||||| Sbjct 201097 GCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 201038 Query 19599 TTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATG 19658 ||| | || ||||| || ||| | |||||||||| || | | | || ||| Sbjct 201037 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 200978 Query 19659 AGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTC 19718 | || ||||| || |||||| |||| || | |||| ||| |||||| ||||| Sbjct 200977 CGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGT-TTTCTT 200919 Query 19719 G-TTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTAC 19777 | ||||||| |||| ||||| || ||| ||||||||||||| | || ||||||||||| Sbjct 200918 GATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAATCTCTGGTAC 200859 Query 19778 TTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACAT 19837 ||| ||||||||| | |||||||| ||||| ||||| |||||||||||||| |||||||| Sbjct 200858 TTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTCCACAT 200799 Query 19838 GCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGT 19897 | | ||||| ||||| |||||||| || || || ||| ||||||||| || ||||| Sbjct 200798 GTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGT 200739 Query 19898 TACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTT 19957 || || | |||| |||||| ||||| ||| ||| || | || || || || Sbjct 200738 AACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATT 200679 Query 19958 CGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGAT 20017 || ||||| |||||||| ||||||||||| ||||| || || || ||||| |||| || Sbjct 200678 TGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAAT 200619 Query 20018 ATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077 || ||||||||| |||||| || |||||||||||||| ||||| | ||| ||| || Sbjct 200618 CTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCC 200559 Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137 || || || || ||| | || | | || || | ||||||||||||||||| ||||| Sbjct 200558 TGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGG 200499 Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTG 20196 ||| || || ||||| || ||||||||| ||||| || |||| || ||||||| Sbjct 200498 TTTCAATTTCAACCAATCTGTAGTTGATAGTCAA-GGTCGTGTAATTAACACCTGGGCTG 200440 Query 20197 ATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACT 20256 || | | || | |||||||| || | ||||| |||||||| || |||||||| |||| Sbjct 200439 ATATTATTAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACT 200380 Query 20257 TCCCACTTGATTTAGCTTCGGCTGA 20281 |||| || || |||||| | | ||| Sbjct 200379 TCCCTCTAGACTTAGCTGCTGTTGA 200355 >seq3 Length=55515152 Score = 215 bits (238), Expect = 1e-51 Identities = 216/278 (78%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 20001 TACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTC 20060 || ||||| ||||||| || ||||||||| |||||| |||| |||||||||||||||| Sbjct 40133064 TATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTTTCGTTCTTTACATTTC 40133123 Query 20061 TTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATG 20120 || || ||| ||| || || || || || ||| ||||| | | || ||| |||||||| Sbjct 40133124 TTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATG 40133183 Query 20121 GCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGAT 20179 ||||||||| | |||||||| ||||||||||| || ||||||||| ||||| || | Sbjct 40133184 GCTTTCAACTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAA-GGTCGTGT 40133242 Query 20180 AATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGA 20239 ||| || ||||||||| | | ||| | |||||||| || | |||||||||| || Sbjct 40133243 AATTAACACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGAAAGTTATGCATGA 40133302 Query 20240 GCGCAATGCTCATAACTTCCCACTTGATTTAGCTTCGG 20277 || ||||||||||||||||| || || ||||| ||| Sbjct 40133303 ACGTAATGCTCATAACTTCCCTCTAGACCTAGCTGCGG 40133340 >seq2 Length=45729672 Score = 168 bits (186), Expect = 2e-37 Identities = 210/288 (73%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||| | || | Sbjct 37873746 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTTGTGTTTTG 37873687 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| |||| || |||||||| || Sbjct 37873686 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCT 37873627 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || |||||||| ||||| || || || | |||||||||||| Sbjct 37873626 CCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAAT 37873567 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || || || || |||||||||| || || Sbjct 37873566 ATTATTTCTGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCAATA 37873507 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATAT 19577 |||||||| | | | ||||| ||||||||||||| || || |||| Sbjct 37873506 TGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGACGATCGATAT 37873459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144437848761372