Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq979 129 6e-25 seq6 129 6e-25 seq4 122 8e-23 seq7 116 3e-21 seq8 114 1e-20 seq5 105 6e-18 seq1 104 2e-17 >seq979 Length=3763 Score = 129 bits (142), Expect = 6e-25 Identities = 338/500 (68%), Gaps = 18/500 (4%) Strand=Plus/Minus Query 23917 TTGGTCAGTTGATGGCAACGAAACTGGCGTATCCGCACTTGAAAGTGCTACCTTCGATCG 23976 |||| ||| ||||||| |||| | |||| || | || | || || ||||||| Sbjct 1388 TTGGCCAGATGATGGCCGCGAAGAAGCGCAATCCCGACCTCAAGATCCTGCCGTCGATCG 1329 Query 23977 GTGGCTGGACGCTGTCTGATCCGTTTTATCACATGCACGAGCCCAGCGTA-CGCCGTGTG 24035 | |||||||||||||| |||||||| | || ||||||| ||| || | ||| ||| Sbjct 1328 GCGGCTGGACGCTGTCCGATCCGTTCTTCCAGCTGCACGA-CCCGGCCAAGCGCAAGGTG 1270 Query 24036 TTTATCGACTCTGTCGAAGAGTTTTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATT 24095 || |||| || ||| |||| || || ||||| ||||| ||||| |||||||| Sbjct 1269 TTCGTCGATTCGACCGAGCAGTTGCTGCGCACCTGGAAGTTCTTCGACGGTGTCGACATC 1210 Query 24096 GATTGGGAGTTCCCCGGCGGCAAAGGGGCAAATCCCAACGTTGGCGATGC-CGAACGTGA 24154 || ||||| ||||| |||||||| || || || | | ||| || | | ||| || Sbjct 1209 GACTGGGAATTCCCGGGCGGCAAGGGCGCGAACGGCGCGATCGGCAATCCGCAGACG-GA 1151 Query 24155 TCGCGCCACGTACACCGCCCTATTGTCAGAGTTGCGCGTCAGAT--TGGA-CGCGTTGGG 24211 |||| ||| | || || || | ||| ||||| | || ||||| | Sbjct 1150 CGGCGCGCTGTATGTGACGCTGATGAAGGAACT--GCGGCAGATGCTCGACCGCGT--GT 1095 Query 24212 CGTGCGCACAAACCGCTA---TTACGCGCTCACCTCTGCCATAAGCGCGGGCAACGACAA 24268 || ||| || | | || | |||| ||| || || || || |||||||||| ||||| Sbjct 1094 CG-GCGGAC-ACCGGCAAGACCTACGAGCTGACGTCGGCGATCGGCGCGGGCAAGGACAA 1037 Query 24269 GATAGCTGTCGTCAACTACACCGAAGCGCAAAAATATTTGGA-TACTATATTCTTGATGA 24327 ||| | || || ||||||| ||||| || || |||| ||| || ||| |||| Sbjct 1036 GATCGACGTGGTGAACTACAAGGAAGCCACGAAGTACATGGACTAC-ATCTTCGACATGA 978 Query 24328 CGTACGACTTCAAAGGAGCCTGGAGCAATACCGACCTAGGCCACCAAACGGCTTTGTTTG 24387 ||||||||| | | || || | ||| || || || || ||||| ||||| || | Sbjct 977 CGTACGACTACTACGGTGCGTTCAGCCTGACGGAGCTGGGTCACCAGACGGCGCTGCACG 918 Query 24388 CGCCCGCGTGGCGACCCGAC 24407 ||||||||||| ||| ||| Sbjct 917 CGCCCGCGTGGAAACCGGAC 898 >seq6 Length=35275713 Score = 129 bits (142), Expect = 6e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| ||||||||||| ||||||||||| Sbjct 24039310 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCA 24039251 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| ||||||||||| || | || | |||||||||||| || ||| Sbjct 24039250 AGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGG 24039191 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| ||| || ||| | | || | ||||| | ||| | Sbjct 24039190 ATTCCTTCCTTGTC-TTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAAC 24039132 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || ||||| || ||||| || ||||| Sbjct 24039131 TTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACGAATATTTGCAT 24039084 >seq4 Length=56582383 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| ||||||||||| ||||| ||||| Sbjct 35111143 CCACCACGAAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTATAATCAGCA 35111202 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| ||||||||||| || | || | |||||||||||| |||||| Sbjct 35111203 AGGGTACGCCTATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGAGGG 35111262 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||||||||| || || ||| | | || | ||||||| | ||| | Sbjct 35111263 ATCCCTTCTTTGTCTTGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCCACC 35111322 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || ||||| || || || || ||||| Sbjct 35111323 TCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 35111369 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| || |||||||| ||||| ||||| Sbjct 35101802 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCA 35101861 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| | ||||||||| || | || | |||||||||||| || ||| Sbjct 35101862 AGGGTACGCCCATCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGG 35101921 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| ||| || ||| | | || | ||||| | ||| | Sbjct 35101922 ATTCCTTCCTTGTC-TTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAAC 35101980 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || ||||| || ||||| Sbjct 35101981 TTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 35102028 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| |||||||| || ||||| ||||| Sbjct 36294097 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCA 36294038 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| |||||||| || || | || | |||||||||||| || ||| Sbjct 36294037 AGGGTACGCCCATCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGG 36293978 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| | | || ||| | | || | ||||| | ||| | Sbjct 36293977 ATTCCTTCCTTGTC-TTGAATCTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAAC 36293919 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || ||||| || ||||| Sbjct 36293918 TTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 36293871 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| | ||| | ||||| ||||| | ||| || ||||| || ||||| ||||| ||| Sbjct 31260482 CCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAGCT 31260541 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | ||||| || || || || || |||| | | |||||| || ||||| Sbjct 31260542 -AGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCAGGAGG 31260600 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||| |||||||| || || ||||| | || | ||||| | || || | Sbjct 31260601 GATTCCCTCTTTGTCTTGAATCTTGGCCTTGACATTATCAATTGTATCTGATGATTCCAC 31260660 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||||||||| || | ||||| ||||| || ||||| Sbjct 31260661 CTCAAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATTTGCAT 31260708 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||| || ||||| | ||| ||||||||||||||||||||||| Sbjct 31287761 CCACCACGAAGCCGCAAAACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCG 31287820 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || | ||||| || ||| |||| | | |||||| || |||||| Sbjct 31287821 AGCGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGAGGG 31287880 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || || || ||| | | || || | | || | |||||| | ||| | Sbjct 31287881 ATACCCTCCTTATC-TTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCCAC 31287939 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| || || || || | ||| ||||| ||||||||||| Sbjct 31287940 CTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 31287987 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | ||| | ||||| ||||| | ||| ||||||||||||||||||||||||| Sbjct 31306226 CCACCTCTCAATCTAAGCACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCGCCA 31306285 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || | ||||| || ||| |||| | | || || || |||||| Sbjct 31306286 AGTGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTTTGTTGATCGGGAGGG 31306345 Query 131128 ATTCCTTCTTTGTC 131141 || || || ||||| Sbjct 31306346 ATACCCTCCTTGTC 31306359 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | |||||| || || | ||| | ||| || ||||| |||||||| ||||| Sbjct 35109318 GCCTCCCCTCAAACGAAGAACAAGATGAAGGGTTGATTCCTTCTGAATGTTATAATCAGC 35109377 Query 131067 CATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || || | || | || || |||||||| || || | || || | |||||||| || | Sbjct 35109378 CAATGTCCTGCCA-TCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGG 35109436 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || || ||||| || || ||||| | || | ||| || | | ||| | Sbjct 35109437 GGATACCCTCCTTGTCCTGTATCTTGGCCTTGACATTATCAATAGTGTCCGAGCTCTCTA 35109496 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||| || || || || || || ||||||||||| Sbjct 35109497 CCTCCAAAGTAATTGTTTTGCCTGTGAGTGTCTTAACAAAAATCTGCAT 35109545 >seq7 Length=49172423 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | || ||||||||||| ||||||||||| Sbjct 47989848 CCACCACGAAGACGGAGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCTGCA 47989789 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||| || ||||||||||| || | |||| |||||||||||| |||||| Sbjct 47989788 AGGGTACGCCCGTCTTCCAGCTGCTTGCCGGCAAAAATTAGACGCTGCTGGTCTGGAGGG 47989729 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | ||||||| | ||| | Sbjct 47989728 ATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCCACC 47989669 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || || || || ||||| || || || || ||||| Sbjct 47989668 TCAAGGGTGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 47989622 >seq8 Length=45569985 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| |||||||| || ||||||||||| Sbjct 33775198 CCACCACGTAGACGGAGGACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCA 33775139 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| |||||||| || ||| |||| || | |||||||||| | || Sbjct 33775138 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCAGGGGA 33775079 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| || || ||| || |||| | || | || |||| | |||| Sbjct 33775078 ATTCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACC 33775019 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| ||| || ||||| || || || ||||| ||||||||| Sbjct 33775018 TCAAGGGTGGTGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATG 33774971 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | || || |||||||| ||||| ||||| Sbjct 6167939 CCACCACGGAGACGGAGCACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCA 6167880 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| ||||||||||| || | || | ||||||||||| || ||| Sbjct 6167879 AGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGG 6167820 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| ||| || ||| | | || | ||||| | ||| | Sbjct 6167819 ATTCCTTCCTTGTC-TTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAAC 6167761 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || ||||| || ||||| Sbjct 6167760 TTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 6167713 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| ||||||||||| ||||| ||||| Sbjct 35000596 CCACCACGGAGACGGAGCACCAAATGAAGGGTAGACTCCTTTTGGATGTTATAATCCGCA 35000655 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| || || ||||| || | || | ||||||||| || || ||| Sbjct 35000656 AGGGTACGCCCATCCTCCAGTTGTTTGCCAGCAAAAATGAGACGCTGCTGATCAGGTGGG 35000715 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| || || ||| | | || | ||||| | ||| | Sbjct 35000716 ATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACT 35000775 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || |||||||| ||||| Sbjct 35000776 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCAT 35000822 Score = 86.0 bits (94), Expect = 6e-12 Identities = 160/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | || ||| || || | || | ||| ||||| || |||||||||||||| | Sbjct 6169079 CCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGCC 6169020 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || |||||||| || || |||| || | |||||| || || ||| Sbjct 6169019 AAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGG 6168960 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC--TCGA 131185 |||||||| ||||| |||||| ||| | | || | || || || || || | Sbjct 6168959 ATTCCTTCCTTGTCCTGGATTTTTGCCTTCACATTATCAATTGTGTC--TGAACTTTCTA 6168902 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| |||||||| | || || || || ||||||||| || Sbjct 6168901 CCTCTAAGGTGATGGTCTTACCGGTCAACGTCTTCACAAAGATCTGCATGCCT 6168849 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || | |||||| || || | || | ||| ||||| || |||||||||||||| Sbjct 34999912 CCTCCCCTCAAACGAAGGACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGCA 34999971 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || |||||||| || || | || || || |||||||| || || Sbjct 34999972 AGAGTCCGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAATCGTTGCTGGTCTGGGGGA 35000031 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||||| ||| | | || | ||| || | | ||| | Sbjct 35000032 ATGCCCTCCTTGTCCTGAATTTTAGCCTTCACATTGTCAATAGTGTCTGAGCTCTCTACC 35000091 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||| || || ||||| || |||||||||||||| Sbjct 35000092 TCCAAAGTAATTGTTTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 35000138 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | |||| ||| | ||| | || |||||||| || ||||||||||| | Sbjct 6168167 CCACCGCGAAGTCGCAACACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCAGCC 6168108 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | || | || || ||||| || || || |||| | | ||||||||| || || Sbjct 6168107 AAGGTTCTGCCA-TCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGG 6168049 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || |||||||| || || ||| | | || | ||||| | | ||| | Sbjct 6168048 GATACCCTCTTTGTCTTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCCAC 6167989 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||||| || || || || ||||| || || || || ||||| Sbjct 6167988 CTCAAGGGTAATCGTCTTTCCAGTGAGAGTCTTCACAAATATTTGCAT 6167941 >seq5 Length=43630510 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | || || ||||| || |||||||| ||| Sbjct 14677269 GCCACCACGGAGACGGAGAACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGC 14677210 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||| || ||||| || || ||| |||| | ||| || |||||||| || Sbjct 14677209 GAGAGTGCGGCCGTCTTCCAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCCGGTGG 14677150 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||||||||| ||| || || | | || | || || | || || | Sbjct 14677149 GATTCCTTCTTTGTCTTGGATCTTGGCTTTCACATTGTCGATGGTGTCTGAAGATTCAAC 14677090 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || || |||||||| ||||| ||||| |||||||| Sbjct 14677089 TTCGAGGGTTATTGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 14677042 >seq1 Length=52991155 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | || | || ||||| || || || |||||||| | Sbjct 28610591 GCCACCACGGAGACGGAGAACAAGGTGAAGCGTGGACTCTTTCTGGATATTGTAATC-CG 28610533 Query 131067 CATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || | || | ||| |||||||| || || ||| |||| | ||| || ||||| || | Sbjct 28610532 CAAGAGTTCTACCGTCTTCTAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCAGGTG 28610473 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 | |||||||||||||| |||||| |||| | || | || |||| || || | Sbjct 28610472 GAATTCCTTCTTTGTCTTGGATTTTGGCTTTGACGTTGTCGATTGTGTCGGATGATTCTA 28610413 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | ||||| ||||| | ||||| |||||||||||||||| Sbjct 28610412 CCTCTAGGGTTATTGTTTTGCCGGTCAAGGTTTTCACGAAAATCTGCATGA 28610362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471999896350080