Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq276 233 2e-56 seq7 233 2e-56 seq8 232 7e-56 seq1 217 2e-51 seq3 93.3 5e-14 seq5 89.7 6e-13 seq4 86.0 7e-12 >seq276 Length=24472 Score = 233 bits (258), Expect = 2e-56 Identities = 600/898 (67%), Gaps = 27/898 (3%) Strand=Plus/Minus Query 92786 TATTCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTC 92845 ||||||||||| | ||| || || |||||||| || ||||||||||| ||||| | Sbjct 23318 TATTCATAACAGAAGCTTTCTGATACTCCCCAACACGCTTCTCAAAGAAATTCGTCTTCC 23259 Query 92846 CTTCCAAAGATATCGAATTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCAC 92903 ||| | || ||| | | || | | | ||||||| | |||||| |||||||| Sbjct 23258 CTTGAAGGGAAATCAACTCCATCCAATCAAACGGATTCTGAACATTATAAACCTTTTCAC 23199 Query 92904 CGATCAA-CTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 | ||| ||| ||||||||||||||| ||||| || || || | |||||| || Sbjct 23198 A-ACCAAGCTCACCCAATAATCTATCAGCAACAAACTCAATATAAGTACTCATCAATCCA 23140 Query 92963 CAATTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTAC 93021 | |||||| || | | ||| || || || || | | | || || || ||| | Sbjct 23139 CCATTCATCCCAACCA-ACGCGCAAGGAAGTGCTTTGCAGACAAATTCACGTTCAATTTC 23081 Query 93022 AACGGCTT--CTTTCAAGATTTCTATTACTCTA-CT--ATTTGGTGGTTTTTGTACGACA 93076 ||| || | | | ||| |||| | || | || | || || ||||||| || Sbjct 23080 AACAGCATTGCATACAA--TTTCCTTCACACGCTCTGAAGTTAGTTTCTTTTGTA-GAAG 23024 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | | ||| | || || ||||| || || | ||||||||| ||||| || | ||| Sbjct 23023 TGA--GTATAACAAACAAGCAAAATCACAGTGCAGACCTTCGTCACGTGAAATAAGCTCG 22966 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || ||||||||| ||||| | | || || || || | ||| || || | |||||| Sbjct 22965 TTTGAGAATGTTAACCCTGGCATTAAACCGCGCTTTTTCAACCAGAAAATCGC-GCAAAA 22907 Query 93197 -CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATT 93255 || || || || || || ||||| || |||||||| || || | ||| |||||| Sbjct 22906 GCTTCCGGAGAAGAAAATTCCTTCTACACAAGCAAATGCAACGATTCTTTCAGCAAAAGA 22847 Query 93256 TGCG---GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 || |||| | |||||||| | |||||||| || |||||| ||||| || Sbjct 22846 ATCGCTTGAATCA------ATCCATTTCATTGCCCAATCAGCCTTTTTCGCGATACATGG 22793 Query 93313 TAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATC 93372 | ||| || || || | ||||| | || || | ||||| | ||| ||||| || Sbjct 22792 AATTGTCTCAATTGCATGAAATAAGCGATTCTTTTCAGCAGAATCGCTTATATATGTTTC 22733 Query 93373 GATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAA 93432 || | || || ||||| |||||||||| || || |||||||||||||| || ||||| Sbjct 22732 AATGAGAAGGGAGTACATCTCAGAATGGATGTTTTCAATTGCAATTTGGAAACCATAGAA 22673 Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492 | ||||| | ||| || ||||||| ||||| | | ||||||||| ||| Sbjct 22672 GGCACGTGCTTCGGAGATTTGGACTTCTTTCATGAATCTTCCGGCAAGATTTTCAAGGAC 22613 Query 93493 TATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC 93552 || || || || || || || || || | | || || || || || | || Sbjct 22612 AATTCCGTCTGAGGCGGCGAAGAAGGCAAGAACGTGAGAGATGAAGTGGCGTTCGCCGTC 22553 Query 93553 TTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | | || || | ||| | ||||| |||||||| ||||||||| | ||||| || Sbjct 22552 TGTGAGGTTGTTCCAGTGCTTGAGATCGGAGGAAAGATCAACTTCTTCGGCGGTCCAGAA 22493 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670 || ||||| |||||||||||||| ||||| || | | | ||||| ||||| || ||| Sbjct 22492 TGAGGCTTCGGCTTTTTTGTACATTTCCCAGATTTTTGGGTATTGGATTGGGAACATG 22435 >seq7 Length=49172423 Score = 233 bits (258), Expect = 2e-56 Identities = 600/898 (67%), Gaps = 27/898 (3%) Strand=Plus/Plus Query 92786 TATTCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTC 92845 ||||||||||| | ||| || || |||||||| || ||||||||||| || || | Sbjct 10196770 TATTCATAACAGAAGCTTTCTGATACTCCCCAACACGCTTCTCAAAGAAATTAGTATTCC 10196829 Query 92846 CTTCCAAAGATATCGAATTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCAC 92903 ||| | ||| ||| ||| || | | | ||||||| | |||||| |||||||| Sbjct 10196830 CTTGAAGAGAAATCAAATCCATCCAATCAAACGGATTCTGAACATTATAAACCTTTTCAC 10196889 Query 92904 CGATCAAC-TCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 | ||| || ||||||||||||||| ||||| || || || | |||||| || Sbjct 10196890 A-ACCAAGATCACCCAATAATCTATCAGCAACAAACTCAATATAAGTACTCATCAATCCA 10196948 Query 92963 CAATTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTAC 93021 | |||||| || | | ||| || || ||||| | | | || || || ||| | Sbjct 10196949 CCATTCATCCCAACCA-ACGCGCAAGGAAGAGCATAGCAGACAAATTCACGTTCAATTTC 10197007 Query 93022 AACGGCTT--CTTTCAAGATTTCTATTACTCTA-CT--ATTTGGTGGTTTTTGTACGACA 93076 ||| || | | | ||| |||| | || | || | || || ||| ||| || Sbjct 10197008 AACAGCATTGCATACAA--TTTCCTTCACACGCTCTGAAGTTAGTTTCTTTAGTA-GAAG 10197064 Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 | | ||| | || || ||||| || || | ||||||||| ||||| || | ||| Sbjct 10197065 TGA--GTATAACAAACAAGCAAAATCACAGTGCAGACCTTCGTCACGTGAAATAAGCTCG 10197122 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 || ||||||||| ||||| | | || || || || | ||| || || | |||||| Sbjct 10197123 TTTGAGAATGTTAACCCTGGCATTAAACCGCGCTTTTTCAACCAGAAAATCGC-GCAAAA 10197181 Query 93197 -CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATT 93255 || || || || || || ||||| || |||||||| || || | ||| |||||| Sbjct 10197182 GCTTCCGGAGAAGAAAATTCCTTCTACACAAGCAAATGCAACGATTCTTTCAGCAAAAGA 10197241 Query 93256 TGCG---GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312 || |||| | |||||||| | |||||||| || |||||| ||||| || Sbjct 10197242 ATCGCTTGAATCA------ATCCATTTCATTGCCCAATCAGCCTTTTTCGCGATACATGG 10197295 Query 93313 TAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATC 93372 | ||| || || || | ||||| | || || | ||||| | ||| ||||| || Sbjct 10197296 AATTGTCTCAATTGCATGAAATAAGCGATTCTTTTCAGCAGAATCGCTTATATATGTTTC 10197355 Query 93373 GATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAA 93432 || | || || ||||| |||||||||| || || |||||||||||||| || ||||| Sbjct 10197356 AATGAGAAGGGAGTACATCTCAGAATGGATGTTTTCAATTGCAATTTGGAAACCATAGAA 10197415 Query 93433 ACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGAC 93492 | ||||| | ||| || ||||||| ||||| | | ||||||||| ||| Sbjct 10197416 GGCACGTGCTTCGGAGATTTGGACTTCTTTCATGAATCTTCCGGCAAGATTTTCAAGGAC 10197475 Query 93493 TATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC 93552 || || || || || || || || || | | || || || || || | || Sbjct 10197476 AATTCCGTCTGAGGCGGCGAAGAAGGCAAGAACGTGAGAGATGAAGTGGCGTTCGCCGTC 10197535 Query 93553 TTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 | | || || | ||| | ||||| |||||||| ||||||||| | ||||| || Sbjct 10197536 TGTGAGGTTGTTCCAGTGCTTGAGATCGGAGGAAAGATCAACTTCTTCGGCGGTCCAGAA 10197595 Query 93613 CGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670 || ||||| |||||||||||||| ||||| || | | | ||||| ||||| || ||| Sbjct 10197596 TGAGGCTTCGGCTTTTTTGTACATTTCCCAGATTTTTGGGTATTGGATTGGGAACATG 10197653 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/93 (81%), Gaps = 4/93 (4%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 42617483 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 42617426 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||| || |||||| ||| | ||| ||||| Sbjct 42617425 GGGTTCAAATCCCACAGCTGTC--ATTTTTATT 42617395 >seq8 Length=45569985 Score = 232 bits (256), Expect = 7e-56 Identities = 596/893 (67%), Gaps = 21/893 (2%) Strand=Plus/Plus Query 92787 ATTCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCC 92846 |||||||||| | ||| || || |||||||| || ||||||||||| || || || Sbjct 25025263 ATTCATAACAGAAGCTTTCTGATACTCCCCAACGCGCTTCTCAAAGAAATTGGTTTTCCC 25025322 Query 92847 TTCCAAAGATATCGAATTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTT-TCAC 92903 | | || ||| ||| || | | | |||||||| | |||||| ||||| |||| Sbjct 25025323 CTGAAGCGAAATCAAATCCATCCAATCAAATGGATTCTGAACATTATAA-ACTTTCTCAC 25025381 Query 92904 CGATCAA-CTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 | ||| ||| |||||| |||||||| ||||| || || |||||| |||||| ||| Sbjct 25025382 A-ACCAAGCTCACCCAATAACCTATCAGCAACAAACTCAATATACTGACTCATCAATTCA 25025440 Query 92963 CAATTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTAC 93021 | ||||| || | | ||| || || || |||||| | || || | || || | Sbjct 25025441 CCGTTCATCCCAACCA-ACGCGCAAGGAAGCGCGTCGCATACAAACTCCCTTTCAATCTC 25025499 Query 93022 AACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGGTG-GTTTTTGTACGACATAAT 93080 ||| || || | || | | || | || | | | |||| || ||| ||| Sbjct 25025500 AACCGCATCACGAACAATCTTCACCACGCG-CTCTGTACTCAGTTTCTG-ACGCAATAGC 25025557 Query 93081 T-GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTG 93139 ||| | || || ||||| || ||||| |||||||| ||||| || | ||| || Sbjct 25025558 GAGTATAACAAACAAGCAAAATCACAGTGTAAGCCTTCGTCGCGTGAAATAAGCTCGTTT 25025617 Query 93140 CTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA 93199 ||| ||||| || || | | || ||||| || | ||| || || | | || || Sbjct 25025618 GAGAAAGTTAATCCCGGCATTAAACCGCGTTTTTTCAACCAGAAAATCGCACAGAAGCTT 25025677 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG 93259 || || || || || ||||| || || || || || || | ||| |||||| || Sbjct 25025678 CCGGAGAAGAAAATTCCTTCAACACAAGCGAAAGCAACGATTCTTTCTGCAAAAGAATCG 25025737 Query 93260 ---GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 |||| ||||||||| ||||||||||| ||||| || |||||| || | | Sbjct 25025738 CTTGAATC------GATCCATTTCAAAGCCCAATCAGCTTTCTTAGCAATACACGGAATT 25025791 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 || || || |||| ||||| || || | ||||| | ||| || || |||| Sbjct 25025792 GTGTCAATTGCGTGAAATAATCGATTCTTTTCAGCAGAATCGCTTATATACGTTTCGAGG 25025851 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 | ||||||||||| || || |||| || || || || ||||| || ||||||||| Sbjct 25025852 AGAAGAGAATACATCTCTGAGTGGATGTTTTCAATAGCGATTTGAAACCCGTAGAAAGCA 25025911 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 | ||||| | ||| || ||||||| ||||| | |||||||||| ||| ||| Sbjct 25025912 CGCGCTTCAGAGATTTGAACTTCTTTCATGAATCTTCCGGCGAGATTTTCGAGGACGATA 25025971 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTA 93556 || ||||| || || || || || | || || || || || || | || | Sbjct 25025972 CCGTCGGAGGCGGCGAAGAAGGCGAGGATGTGAGAGATGAAGTGGCGTTCGCCGTCGGTG 25026031 Query 93557 AGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGAT 93616 || || | ||| | ||||| |||||||||||||||||| | ||||| || || Sbjct 25026032 AGGTTGTTCCAGTGTTGAAGATCGGAGGAAAGATCGACTTCTTCGGCGGTCCAGAAAGAG 25026091 Query 93617 GCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669 ||||| |||||||||||||| ||||| || | | | ||||| ||||| || || Sbjct 25026092 GCTTCGGCTTTTTTGTACATTTCCCAGATTTTTGGGTATTGGATTGGGAACAT 25026144 Score = 93.3 bits (102), Expect = 5e-14 Identities = 75/90 (83%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 33802663 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 33802606 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||| || |||||| ||| ||||||||| Sbjct 33802605 GGGTTCAAATCCCACAGCTGTCAAATTATT 33802576 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/89 (82%), Gaps = 6/89 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 7538653 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGGG 7538710 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||| || ||||| ||||||||| Sbjct 7538711 CGTGGGTTCAAATCCCACTTCTGACAAAT 7538739 >seq1 Length=52991155 Score = 217 bits (240), Expect = 2e-51 Identities = 592/895 (66%), Gaps = 21/895 (2%) Strand=Plus/Minus Query 92786 TATTCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTC 92845 ||||||||||| ||| || || |||||||| || ||||| ||||| || |||| Sbjct 19457829 TATTCATAACAGATGCTTTCTGATACTCCCCAACGCGCTTCTCAAAAAAATTGGTTTTTC 19457770 Query 92846 CTTCCAAAGATATCGAATTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTTTCAC 92903 | | | || ||| | | || | | | ||||||| | || ||| |||||||| Sbjct 19457769 CCTGAAGCGAAATCAATTCCATCCAATCAAACGGATTCTGAACATTGTAAACCTTTTCAC 19457710 Query 92904 CGATCAA-CTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 | ||| ||| |||||| |||||||| ||||| || || ||| | ||||||| | Sbjct 19457709 A-ACCAAGCTCACCCAATAACCTATCAGCAACAAACTCAATATACGTACTCATCAAACCC 19457651 Query 92963 CAATTCATTCCTAGAAGACGTACA-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTAC 93021 | |||||| || | | ||| || || || |||| | || || || | || ||| | Sbjct 19457650 CCATTCATCCCAACCA-ACGCGCAAGGAAGCGCGTGGCACACAAACTCCCTTTCAATTTC 19457592 Query 93022 AACGGCTTCTTTCAAGATTTCTATTACTCTA-CT--ATTTGGTGGTTTTTGTACGACATA 93078 ||| || || | |||||| | || | || | || | ||| ||| || | Sbjct 19457591 AACAGCATCACAAACAATTTCTTTCACGCGCTCTGAACTTAGCTTCTTTCGTA-GAAGTG 19457533 Query 93079 ATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATT 93138 | ||| | || || || || || || || |||||||| ||||| || | ||| || Sbjct 19457532 A--GTATAACAAACAAGCGAAATCACAGTGCAATCCTTCGTCGCGTGAAATAAGCTCGTT 19457475 Query 93139 GCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACT 93198 ||| ||||| || || | | || || || || | ||| || || | | || || Sbjct 19457474 TGAGAAGGTTAATCCCGGCATTAAACCGCGCTTTTTCAACCAGAAAATCGCACAGAAGCT 19457415 Query 93199 ACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGC 93258 || || ||||| || ||||| || ||||| || || || | ||| |||||| | Sbjct 19457414 TCCGGAGAAAAAGATTCCTTCAACACAAGCAAACGCAACGATTCTTTCTGCAAAAGAATC 19457355 Query 93259 G---GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAG 93315 | |||| ||||||||| | |||||||| ||||| ||| ||||| || | Sbjct 19457354 GCTTGAATC------GATCCATTTCATCGCCCAATCAGCTTTCTTCGCGATACATGGAAT 19457301 Query 93316 TGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375 |||||| || || | ||||| | || || | ||||| | ||| || || |||| Sbjct 19457300 TGTTTCAATTGCATGAAATAAGCGATTCTTTTCAGCGGAATCGCTTATATACGTTTCGAG 19457241 Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435 | ||||||||||| ||||| |||| || || |||||||| ||||| |||||||| Sbjct 19457240 GAGAAGAGAATACATCTCAGAGTGGATGTTTTCAATTGCAATCTGGAAACCGTAGAAGGC 19457181 Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495 | ||||| | || || | ||||| |||||| | ||||||||||| ||| || Sbjct 19457180 ACGTGCTTCAGAGACTTGGATTTCTTTCATAAATCTACCGGCGAGATTTTCAAGGACGAT 19457121 Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT 93555 || ||||| || || || || || | | ||| || || || || | || | Sbjct 19457120 GCCGTCGGAGGCAGCGAAGAAGGCGAGGACATGAGAGATGAAGTGGCGTTCGCCGTCGGT 19457061 Query 93556 AAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGA 93615 || || | ||| | ||||| ||||||||||||||||| | ||||| || || Sbjct 19457060 GAGGTTTTGCCAGTGCTTGAGATCGGAGGAAAGATCGACTTCTTCAGCGGTCCAGAATGA 19457001 Query 93616 TGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATG 93670 ||||| |||||||||||||| ||||| || | | | ||||| ||||| || ||| Sbjct 19457000 GGCTTCGGCTTTTTTGTACATTTCCCAGATTTTTGGGTATTGGATTGGGAACATG 19456946 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/90 (82%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 47490358 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 47490301 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||| || |||||| ||| |||||| || Sbjct 47490300 GGGTTCAAATCCCACAGCTGTCAAATTTTT 47490271 Score = 82.4 bits (90), Expect = 9e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 8124556 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGG 8124499 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 8124498 GCGTGGGTTCAAATCCCACTTCTGACA 8124472 >seq3 Length=55515152 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/95 (82%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| |||||||| | | |||| Sbjct 24250126 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGC 24250185 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||| || ||||| |||||| || ||||| Sbjct 24250186 GTGGGTTCAAATCCCACTTCTGACATTTTTTTATT 24250220 Score = 86.0 bits (94), Expect = 7e-12 Identities = 81/101 (80%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 42085135 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 42085078 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTT 126365 |||||| || |||||| ||| | ||||||| || ||||| Sbjct 42085077 GGGTTCAAATCCCACAGCTGTC-AATTATTTTTTTCATTTT 42085038 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/97 (80%), Gaps = 8/97 (8%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 53197926 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGG 53197869 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||||||| || ||||| ||||| ||| ||||| Sbjct 53197868 GCGTGGGTTCAAATCCCACTTCTGAC--ATTTTTATT 53197834 >seq5 Length=43630510 Score = 89.7 bits (98), Expect = 6e-13 Identities = 86/108 (80%), Gaps = 7/108 (6%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || | Sbjct 36107397 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGGG 36107454 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 ||||||||| || ||||| ||||| |||| ||||| |||||||| Sbjct 36107455 CGTGGGTTCAAATCCCACTTCTGAC-AATTTTTATTTATTTTTTTGTT 36107501 Score = 84.2 bits (92), Expect = 2e-11 Identities = 75/93 (81%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 12974252 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 12974309 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATT 126357 |||||| || |||||| ||| || ||| | ||| Sbjct 12974310 GGGTTCAAATCCCACAGCTGTCATATTTTAATT 12974342 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/94 (81%), Gaps = 4/94 (4%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| |||||||||||||||||||||||||||||| | |||||| || | |||| Sbjct 40579682 AGACAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGT 40579739 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATTG 126358 |||||| || |||||| ||| ||| |||| ||| Sbjct 40579740 GGGTTCAAATCCCACAGCTGTCAA--TATTTTTG 40579771 Score = 82.4 bits (90), Expect = 9e-11 Identities = 82/104 (79%), Gaps = 3/104 (3%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGG--TTCCCTCGGGAGC 126322 ||||||| ||||||||||||||||||||||||| | ||| ||||| ||| | | || Sbjct 17537461 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTCTTCGAAAGAGGGC 17537520 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||| || ||||| ||||| | || ||||| | ||||| Sbjct 17537521 GTGGGTTCAAATCCCACTTCTGAC-ATTTTTTATTTTATTTTTT 17537563 >seq4 Length=56582383 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/94 (81%), Gaps = 6/94 (6%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 27353549 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGAGAGAGG 27353606 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||||||| || ||||| ||||||| || || Sbjct 27353607 GCGTGGGTTCAAATCCCACTTCTGACAATTTTTT 27353640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556845576817880