Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8 104 5e-17 >seq8 Length=45569985 Score = 104 bits (114), Expect = 5e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 243511 GAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGC 243570 || || ||||| | |||| ||| || | |||||||| |||| ||| | | |||| Sbjct 25025508 GATGCGGTTGAGATTGAAAGGGAGTTTGTATGCGACGCGCTTCCTTGCGCGTTGGTTGGG 25025449 Query 243571 ATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCG 243630 |||||| |||| | ||| | ||||| || || || || || || | | || | | Sbjct 25025448 ATGAACGGTGAATTGATGAGTCAGTATATTGAGTTTGTTGCTGATAGGTTATTGGGTGAG 25025389 Query 243631 CTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCG 243690 ||||||| ||||||||| || || |||| || |||| | ||||| | |||||| Sbjct 25025388 CTTGGTTGTGAGAAAGTTTATAATGTTCAGAATCCATTTGATTGGATGGATTTGATTTCG 25025329 Query 243691 CTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 ||||| |||||||| || ||||| || ||||| || | || ||||| Sbjct 25025328 CTTCAGGGGAAAACCAATTTCTTTGAGAAGCGCGTTGGGGAGTATCA 25025282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102849096268450