Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6 118 1e-21 seq8 116 4e-21 seq4 107 2e-18 seq7 102 9e-17 seq1 89.7 6e-13 >seq6 Length=35275713 Score = 118 bits (130), Expect = 1e-21 Identities = 164/226 (73%), Gaps = 8/226 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| ||||||||| || ||||||||||| || || ||| | Sbjct 24039299 ACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGCCC 24039240 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| ||||| || || || ||||||||||| | ||| | | ||||| Sbjct 24039239 ATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGGATTCCTTCCTT 24039180 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 || | ||| |||||| | | | | | | | || || ||| || || |||| | Sbjct 24039179 GT-CTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTC---TCAACTTCGAGAG 24039124 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTCAC 42214 ||||||| ||||| || || ||||| || || |||||||| | ||| Sbjct 24039123 TGATGGTCTTGCCAGTAAGAGTCTTGACGAATATTTGCATCTACAC 24039078 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| ||||| || |||||||| || ||||| | | || || |||||||| ||||| || Sbjct 24039503 CTCTTTTTGGATGTTGTAATCGGCAAGAGTTCTGCCATCTTCAAGCTGCTTTCCAGCAAA 24039444 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | ||||||||| | || | | |||||||||| ||| | || | ||||| Sbjct 24039443 AATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCC-TGAATCTTGGCTTTGACAT 24039385 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | || || |||| ||||| || | ||||| || || || || || |||| Sbjct 24039384 TATCAATAGTATCAGAGCTC---TCCACCTCAAGGGTGATTGTCTTTCCAGTGAGAGTCT 24039328 Query 42193 TTACAAAGATTTGCAT 42208 | || ||||||||||| Sbjct 24039327 TGACGAAGATTTGCAT 24039312 >seq8 Length=45569985 Score = 116 bits (128), Expect = 4e-21 Identities = 160/220 (73%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| |||||||| || || |||||||| || || ||| | Sbjct 6167928 ACGGAGCACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGCCC 6167869 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| ||||| || || |||||||||||||| | ||| | | ||||| Sbjct 6167868 ATCCTCCAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATTCCTTCCTT 6167809 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 || | ||| |||||| | | | | | | | || || ||| || || |||| | Sbjct 6167808 GT-CTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTC---TCAACTTCGAGAG 6167753 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||| ||||| || || ||||| || ||||||||||| Sbjct 6167752 TGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 6167713 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||| | || | || | ||| ||| || ||||| ||||||||||| Sbjct 6169080 ACCTCCCCTCAGACGAAGGACAAGGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGC 6169021 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || |||||| | || || |||||||| ||||| || || | | |||||| || | ||| Sbjct 6169020 CAAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGG 6168961 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | ||||||||| ||||||| || | | | | ||||| ||| || Sbjct 6168960 GATTCCTTCCTTGTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTAC 6168901 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| || || || | |||||| |||||||| ||||| Sbjct 6168900 CTCTAAGGTGATGGTCTTACCGGTCAACGTCTTCACAAAGATCTGCAT 6168853 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || ||||| | || | || | || ||| || ||||| ||||||||||| Sbjct 34999911 ACCTCCCCTCAAACGAAGGACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGC 34999970 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 |||||||| | || || |||||||| ||||| || || | ||| |||||||| | || Sbjct 34999971 AAGAGTCCGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAATCGTTGCTGGTCTGGGGG 35000030 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATT 42156 | || |||||||||| ||| |||| | || | | | | ||||| |||| | Sbjct 35000031 AATGCCCTCCTTGTCC-TGAATTTTAGCCTTCACATTGTCAATAGTGTCTGAGCTC---T 35000086 Query 42157 CCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || | || || |||||||| || || ||||| || || || ||||| Sbjct 35000087 CTACCTCCAAAGTAATTGTTTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 35000138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || ||||| ||||||||||||| |||||| | || || |||||||| ||||| || Sbjct 6168816 CTCTTTCTGAATGTTGTAATCAGCCAAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAA 6168757 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | |||||| || | ||| | | |||||| ||| |||||| || | | Sbjct 6168756 GATCAACCTCTGCTGATCAGGTGGAATTCCCTCCTTATCCTGTATTTTTGCCTTAACATT 6168697 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| ||| |||||| || | || ||||| || || || | ||||| Sbjct 6168696 ATCGATGGTGTCTGAGCT---TTCCACCTCCAATGTAATGGTCTTTCCTGTCAAAGTCTT 6168640 Query 42194 TACAAAGATTTGCAT 42208 |||||||| ||||| Sbjct 6168639 CACAAAGATCTGCAT 6168625 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||||||||| || || || |||| || |||||||| || ||||| Sbjct 33775163 CTCCTTCTGGATGTTGTAATCAGCAAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAA 33775104 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | | ||||||||| || | | ||||| ||| ||| || ||||| ||| Sbjct 33775103 GATCAACCTCTGCTGGTCCAGGGGAATTCCTTCCTTATCCTGGATCTTGGCTTTGA-CGT 33775045 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||| || || | ||| |||| ||||| || || ||||| | Sbjct 33775044 TGTCGATGGTGTCGGAGCTTTCGACCTCAAGGGTGGTGGTCTTGCCGGTGAGGGTCTTAA 33774985 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 33774984 CGAAGATCTGCAT 33774972 >seq4 Length=56582383 Score = 107 bits (118), Expect = 2e-18 Identities = 158/220 (72%), Gaps = 8/220 (4%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| |||||||| || || |||||||| || || ||| | Sbjct 35101813 ACGGAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGCCC 35101872 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | |||||| ||||| || || || ||||||||||| | ||| | | ||||| Sbjct 35101873 ATCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATTCCTTCCTT 35101932 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 || | ||| |||||| | | | | | | | || || ||| || || |||| | Sbjct 35101933 GT-CTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTC---TCAACTTCGAGAG 35101988 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||| ||||| || || ||||| || ||||||||||| Sbjct 35101989 TGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCAT 35102028 Score = 102 bits (112), Expect = 9e-17 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | ||||||||| | ||| |||||| || || || |||||||| || || ||| | Sbjct 36294086 ACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCAAGGGTACGCCC 36294027 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || |||||||| ||||| || || || ||||||||||| | ||| | | ||||| Sbjct 36294026 ATCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGGATTCCTTCCTT 36293967 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 42168 || | ||| | |||| | | | | | | | || || ||| || || |||| | Sbjct 36293966 GT-CTTGAATCTTTGCCTTAACATTGTCTATGGTATCTGAACTC---TCAACTTCGAGAG 36293911 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||| || || || || ||||| || ||||||||||| Sbjct 36293910 TGATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCAT 36293871 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||| |||||||| | ||| |||||||||||| ||||||||||| || || ||| || Sbjct 31287773 CGCAAAACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCGAGCGTGCGCCCG 31287832 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || | |||||||| ||||| || || | |||||| || | || | | |||||| Sbjct 31287833 TCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGAGGGATACCCTCCTTA 31287892 Query 42114 TC 42115 || Sbjct 31287893 TC 31287894 Score = 86.0 bits (94), Expect = 7e-12 Identities = 99/132 (75%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 ||| ||||||||||| || ||||| || ||||| ||||| |||| ||| || | || Sbjct 31259812 CAAAACCAAATGCAAAGTAGATTCCTTCTGGATATTATAATCGGCCAAAGTACGACCATC 31259871 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || | |||||| ||||| || || |||| ||||||||| | || | || ||| || || Sbjct 31259872 CTCCAACTGCTTTCCAGCAAAAATTAGTCTCTGCTGGTCAGGAGGAATGCCCTCTTTATC 31259931 Query 42116 CATGATTTTTTG 42127 | ||| |||||| Sbjct 31259932 C-TGAATTTTTG 31259942 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 ||| |||||||||| || || || || ||||| |||||||||||||| || | || Sbjct 31287091 CAAAACCAAATGCAGAGTAGATTCTTTCTGGATATTATAATCAGCCAGAGTACGGCCATC 31287150 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || | |||||| || ||||| || || | ||||||||| | || | || ||| ||||| Sbjct 31287151 TTCCAACTGCTTGCCCGCGAAAATTAGCCTCTGCTGGTCTGGAGGAATGCCCTCTTTGTC 31287210 Query 42116 CATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 42174 | ||| | |||| || ||| | | | || || ||| || || | || || | Sbjct 31287211 C-TGAATCTTTGCTTTCACGTTGTCAATTGTATCAGAACTTTCAACCTCCAAAGTTATTG 31287269 Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || || ||||| ||||| || ||||| Sbjct 31287270 TCTTTCCGGTAAGAGTCTTCACAAAAATCTGCAT 31287303 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 || ||||| || |||| ||| | || | ||| |||||||| || |||||||| || Sbjct 31288217 CCACCTCTCAATCGCAGCACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAATCCGCA 31288276 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || || || | || || | || |||||||| ||||| || | ||||| |||| || Sbjct 31288277 AGGGTGCGGCCATCTTCCAATTGTTTACCAGCAAATATAAGCCTTTGCTGATCGGGAGGA 31288336 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCG---CTCGATTC 42157 | | |||||||| ||| | || | || | ||| | | | || || ||| || Sbjct 31288337 ATACCTTCCTTGTCT-TGAATCTTAGCTTTAACGTTGTCTATGGTATCAGAACTC---TC 31288392 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||| |||| ||||| |||||||| || | || || |||||||||||||| Sbjct 31288393 CACCTCGAGGGTGATAGTTTTGCCAGTCAATGTTTTCACAAAGATTTGCAT 31288443 Score = 86.0 bits (94), Expect = 7e-12 Identities = 139/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||||||||| ||||| | | || || |||||||| ||||| || Sbjct 35109582 CTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGCTTTCCAGCAAA 35109641 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | ||||||||| | || | || |||||||||| ||| | || | || | Sbjct 35109642 AATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACAT 35109700 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | || || || || || || || |||| Sbjct 35109701 TGTCAATCGTGTCCGAGCTC---TCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCT 35109757 Query 42193 TTACAAAGATTTGCAT 42208 ||||||| || ||||| Sbjct 35109758 TTACAAAAATCTGCAT 35109773 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||||||||| ||||| | | || || ||||| || ||||| || Sbjct 35109810 CTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAA 35109869 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | ||||||||| | || | || |||||||||| ||| | || | || | Sbjct 35109870 AATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACAT 35109928 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | || || || || || || || |||| Sbjct 35109929 TGTCAATCGTGTCCGAGCTC---TCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCT 35109985 Query 42193 TTACAAAGATTTGCAT 42208 ||||||| || ||||| Sbjct 35109986 TTACAAAAATCTGCAT 35110001 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||||||||| ||||| | | || || ||||| || ||||| || Sbjct 35110038 CTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAA 35110097 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | ||||||||| | || | || |||||||||| ||| | || | || | Sbjct 35110098 AATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACAT 35110156 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | || || || || || || || |||| Sbjct 35110157 TGTCAATCGTGTCCGAGCTC---TCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCT 35110213 Query 42193 TTACAAAGATTTGCAT 42208 ||||||| || ||||| Sbjct 35110214 TTACAAAAATCTGCAT 35110229 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||||||||| ||||| | | || || ||||| || ||||| || Sbjct 35110266 CTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAA 35110325 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | ||||||||| | || | || |||||||||| ||| | || | || | Sbjct 35110326 AATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACAT 35110384 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | || || || || || || || |||| Sbjct 35110385 TGTCAATCGTGTCCGAGCTC---TCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCT 35110441 Query 42193 TTACAAAGATTTGCAT 42208 ||||||| || ||||| Sbjct 35110442 TTACAAAAATCTGCAT 35110457 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||||||||| ||||| | | || || ||||| || ||||| || Sbjct 35110494 CTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAA 35110553 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | ||||||||| | || | || |||||||||| ||| | || | || | Sbjct 35110554 AATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACAT 35110612 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | || || || || || || || |||| Sbjct 35110613 TGTCAATCGTGTCCGAGCTC---TCAACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCT 35110669 Query 42193 TTACAAAGATTTGCAT 42208 ||||||| || ||||| Sbjct 35110670 TTACAAAAATCTGCAT 35110685 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || || ||||||||||| ||||| | | || || ||||| || ||||| || Sbjct 35110722 CTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAA 35110781 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| | ||||||||| | || | || |||||||||| ||| | || | || | Sbjct 35110782 AATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC-TGAATCTTAGCCTTTACAT 35110840 Query 42136 TCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || || | || || || || || || || |||| Sbjct 35110841 TGTCAATCGTGTCCGAGCTC---TCTACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTCT 35110897 Query 42193 TTACAAAGATTTGCAT 42208 ||||||| || ||||| Sbjct 35110898 TTACAAAAATCTGCAT 35110913 >seq7 Length=49172423 Score = 102 bits (112), Expect = 9e-17 Identities = 157/220 (71%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | |||| ||||||||| || |||||||| || || || ||| | Sbjct 47989837 ACGGAGCACCAAGTGGAGTGTGGACTCCTTTTGGATGTTGTAATCTGCAAGGGTACGCCC 47989778 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 ||| || |||||||| || || || || || ||||||||||| | || | | ||||| Sbjct 47989777 GTCTTCCAGCTGCTTGCCGGCAAAAATTAGACGCTGCTGGTCTGGAGGGATCCCTTCCTT 47989718 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACC-GTGTCG---CTCGATTCCACATCGACCG 42168 ||| ||| | || | | | | | | || || ||| ||| ||||| || | | Sbjct 47989717 GTCT-TGAATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTC---TCCACCTCAAGGG 47989662 Query 42169 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||| || || || || || ||||| |||||||||||||| Sbjct 47989661 TGATTGTCTTTCCTGTGAGAGTCTTCACAAAGATTTGCAT 47989622 >seq1 Length=52991155 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||| || || ||||||||||| || ||||| | |||| |||||||| || || ||||| Sbjct 28610555 CTCTTTCTGGATATTGTAATCCGCAAGAGTTCTACCGTCTTCTAGCTGTTTTCCGGCGAA 28610496 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| || || ||||| | ||| | | || ||||| |||||| ||||| ||| Sbjct 28610495 GATGAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCTTTGA-CGT 28610437 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| ||||| || || | || || |||||||| || | || || | Sbjct 28610436 TGTCGATTGTGTCGGATGATTCTACCTCTAGGGTTATTGTTTTGCCGGTCAAGGTTTTCA 28610377 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 28610376 CGAAAATCTGCAT 28610364 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071 || ||||| || || ||||| ||||| || ||||| | | || || | |||||| || Sbjct 28610788 GTACTCTCTTTCTGGATATTATAATCCGCAAGAGTTCTTCCATCTTCCAACTGCTTCCCT 28610729 Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131 || || || | ||| ||||| || | ||| | || |||||||| ||| | || | | Sbjct 28610728 GCAAAGATCAATCGTTGCTGATCCGGTGGAATGCCTTCCTTGTCT-TGAATCTTCGCCTT 28610670 Query 42132 AGCGTCGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGT 42190 ||| | | | ||||| ||||| || || | || |||||||| || ||||| || Sbjct 28610669 CACGTTGTCGATTGTGTCAGAAGATTCAACTTCCAGGGTTATGGTTTTCCCTGTTAGGGT 28610610 Query 42191 CTTTACAAAGATTTGCAT 42208 || |||||||||||||| Sbjct 28610609 TTTGACAAAGATTTGCAT 28610592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543197949920080