Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 seq979 136 4e-27 seq4 127 2e-24 seq8 114 1e-20 seq6 105 6e-18 >seq1 Length=52991155 Score = 143 bits (158), Expect = 2e-29 Identities = 172/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || ||||| | ||||| |||||||| ||||| || || |||||||||||||| Sbjct 28610821 ATCCCACCGCGCAACCTCAGAACTAGATGAAGCGTACTCTCTTTCTGGATATTATAATCC 28610762 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| ||||| || || ||||| | |||||||||||||| ||||| Sbjct 28610761 GCAAGAGTTCTTCCATCTTCCAACTGCTTCCCTGCAAAGATCAATCGTTGCTGATCCGGT 28610702 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| || |||||||| || || | || | || | ||||| ||||| || Sbjct 28610701 GGAATGCCTTCCTTGTCTTGAATCTTCGCCTTCA-CGTTGTCGATTGTGTCAGAAGATTC 28610643 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||||| || ||||| ||||| ||||| |||||||| Sbjct 28610642 AACTTCCAGGGTTATGGTTTTCCCTGTTAGGGTTTTGACAAAGATTTGCAT 28610592 Score = 113 bits (124), Expect = 4e-20 Identities = 165/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || || || ||||| || || || |||||||| ||||| Sbjct 28610593 ATGCCACCACGGAGACGGAGAACAAGGTGAAGCGTGGACTCTTTCTGGATATTGTAATCC 28610534 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| || || || | |||||||| ||| | || | ||||| ||||| || Sbjct 28610533 GCAAGAGTTCTACCGTCTTCTAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCAGGT 28610474 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| |||||||| ||||| ||||| ||||| || | || | |||||||| || || Sbjct 28610473 GGAATTCCTTCTTTGTCTTGGATTTTGGCTTTGA-CGTTGTCGATTGTGTCGGATGATTC 28610415 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||||||||| | ||||| || ||||| ||||| Sbjct 28610414 TACCTCTAGGGTTATTGTTTTGCCGGTCAAGGTTTTCACGAAAATCTGCAT 28610364 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || ||||| | || ||||| ||||| || || || || ||||||||||| | Sbjct 28611046 CCACCACGTAGCCTGAGAACAAGATGAAGCGTAGACTCTTTCTGAATATTATAATCAGCG 28610987 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | ||| || | ||||||||| || | |||||||| ||||| ||||| ||| Sbjct 28610986 AGAGTCCTCCCATCCTCAAGTTGTTTTCCAGCAAAGATCAATCGCTGCTGATCCGGTGGA 28610927 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 ||||| || ||||| ||||| || || | || | || | || || ||| ||| || Sbjct 28610926 ATGCCCTCCTTATCCTGAATCTTGGCCTTCA-CGTTATCAATAGTATCAGAACTCTCCAC 28610868 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||||| || || ||||| | || || ||||| || |||||| Sbjct 28610867 CTCTAGAGTAATTGTCTTCCCGGTCAACGTCTTCACAAATATCTGCATC 28610819 >seq979 Length=3763 Score = 136 bits (150), Expect = 4e-27 Identities = 443/675 (66%), Gaps = 21/675 (3%) Strand=Plus/Plus Query 50154 TTGTAATCAACTACGCCGTCTTCCCAAGTGCCTGCCGC-----CGGGCCGGTGGCGATTC 50208 ||||| || | | |||| ||||||| ||||| | ||| || | ||| | | Sbjct 704 TTGTAGTCGAGAATGCCGGCTTCCCA-----CTGCCCCTTGTGCGGCCCCTTCGCGGTGC 758 Query 50209 CCGTAAACGGATTGTCGTCTTTGTAGCCGGTCACGCCGCGCCAACCCCTGCCGTACATGG 50268 | || ||||||||| |||| | ||||| | ||||||| ||| || | | |||| | Sbjct 759 CGGTGAACGGATTGCCGTCGGTATAGCCCGACACGCCGTTCCAGCCGCGGGCGTATGCCG 818 Query 50269 CCACGCCTACGATTATTTTGCTCGGCTGCACGTTTTGATCGAGAAGAACGTTTACCGCAA 50328 || |||| |||| | || |||| | ||| || | || || | || | || Sbjct 819 CCGCGCCGACGACGAGCTTCTTCGGATCGACGCCCTGCGCAAGCAGCGCCTTGATCGAGT 878 Query 50329 AATCGGTCGTGTACTTTTCGTCGGTGTTCCATGCGGGCGCATACAAAGGCGTCTGATGTC 50388 |||||||||||||| ||| | ||||| |||||||| | || | |||||| || | Sbjct 879 TGTCGGTCGTGTACTTGGTGTCCGGTTTCCACGCGGGCGCGTGCAGCGCCGTCTGGTGAC 938 Query 50389 CCAAATC-GAC-GGTGGACCAAGCGCCTTTAAAATCGTAACTCATTAAAAATATTTTATC 50446 ||| || | | || || | || || | | ||||| |||| || || | || Sbjct 939 CCAGCTCCGTCAGGCTGAAC--GCACCGTAGTAGTCGTACGTCATGTCGAAGATGTAGTC 996 Query 50447 TAAATAATTTTGAGCGTCGCCGTAATTGACAAGGGCGATTTTATCGTAACCTGCGCTAAC 50506 | || || || || ||| || || | | |||| || || | || |||| | Sbjct 997 CATGTACTTCGTGGCTTCCTTGTAGTTCACCACGTCGATCTTGTCCTTGCCCGCGCCGAT 1056 Query 50507 GGCGCTCGTCAATTCGAATTCGCGGCCGGTGACGCGTTGAAGATCG-TCCAGCATGTCGC 50565 || ||||| ||| | ||||||| | || || || || ||||| | | Sbjct 1057 CGCCGACGTCAGCTCGTAGGTCTTGCCGGTGTC-CGCCGACACGCGGTCGAGCATCTGCC 1115 Query 50566 GCAGATCGCGAAGCAGCACAACGTAC-GTGAGTCCGTCTTTGTGAGGATCGCCGACTGCG 50624 |||| || | |||| || ||| | | | ||||| | || |||| ||||| ||| Sbjct 1116 GCAGTTCCTTCATCAGCGTCACATACAGCGCG-CCGTCCGTCTGCGGATTGCCGATCGCG 1174 Query 50625 GGATTGGCGCCGTTGCCGCCGGGAAACTCCCAATCGATGTCGACGCCGTCGAAAAACTTC 50684 || ||||| |||||||| || || ||||| ||||||||||| |||||||| |||||| Sbjct 1175 CCGTTCGCGCCCTTGCCGCCCGGGAATTCCCAGTCGATGTCGACACCGTCGAAGAACTTC 1234 Query 50685 CAAGTCAGCAGAAACT-CGCGTACCGATTCCACAAAAACGGCTCGTTTTTCCGCGTCGTG 50743 || || |||| |||| | || ||| || || || || || || ||| |||||| Sbjct 1235 CAGGTGCGCAGCAACTGCTCG-GTCGAATCGACGAACACCTTGCGCTTGGCCGGGTCGTG 1293 Query 50744 CATGTGAAAAAATGGATCGGACAACGTCCATCCGCCTATAGACGGTAACACCTTGAGGTG 50803 || || || || |||||||||| |||||| ||||| || ||||| | | |||||||| Sbjct 1294 CAGCTGGAAGAACGGATCGGACAGCGTCCAGCCGCCGATCGACGGCAGGATCTTGAGGTC 1353 Query 50804 CGGGTTG-GCTTTTT 50817 || ||| |||| || Sbjct 1354 GGGATTGCGCTTCTT 1368 >seq4 Length=56582383 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||| ||| || | |||||| || ||||||||||||||||||||||| Sbjct 31287530 ATACCACCACGAAGCCGCAAAACCAAATGCAGAGTGGATTCCTTTTGGATATTATAATCA 31287589 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | |||||| ||||| | || | || ||||| || || Sbjct 31287590 GCAAGGGTCCTTCCATCTTCAAGTTGTTTCCCTGCAAAGATAAGTCTCTGCTGATCAGGA 31287649 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || |||||||| ||||| ||||| || ||| | || | || || ||| ||| Sbjct 31287650 GGGATGCCTTCCTTATCCTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCA 31287709 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| ||||| ||||| || || ||||||||||||||||| Sbjct 31287710 ACCTCCAAAGTAATAGTTTTTCCGGTAAGGGTCTTTACAAAAATTTGCAT 31287759 Score = 114 bits (126), Expect = 1e-20 Identities = 156/215 (73%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 45128 CAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATC 45187 || ||| || || || || |||||||||||||| || ||||| | ||| ||| Sbjct 31288231 CAGCACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAATCCGCAAGGGTGCGGCCATC 31288290 Query 45188 GTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATC 45247 ||||||||||| || || |||| | | |||||| || || ||||| ||||| || || Sbjct 31288291 TTCCAATTGTTTACCAGCAAATATAAGCCTTTGCTGATCGGGAGGAATACCTTCCTTGTC 31288350 Query 45248 TTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCG 45306 ||||| | || | || | || | |||| ||| || ||| ||| || ||||| || | | Sbjct 31288351 TTGAA-TCTTAGCTTTAACGTTGTCTATGGTATCAGAACTCTCCACCTCGAGGGTGATAG 31288409 Query 45307 TTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||| || | ||||| ||||| ||||||||| Sbjct 31288410 TTTTGCCAGTCAATGTTTTCACAAAGATTTGCATC 31288444 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||| || || |||||||||||||| |||||||| Sbjct 35101799 ATACCACCACGGAGACGGAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTATAATCA 35101858 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| ||||| || || || || | |||| || |||||||| || Sbjct 35101859 GCAAGGGTACGCCCATCCTCCAACTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGT 35101918 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||||||| || | |||| ||| || ||| ||| Sbjct 35101919 GGGATTCCTTCCTTGTCTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCA 35101978 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||||||| | || ||||| || || || || || || ||||||||| Sbjct 35101979 ACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCATC 35102029 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||||||| || | ||||| || |||||||| ||||||||||||||| Sbjct 31259795 ATGCCACCACGAAGCCTCAAAACCAAATGCAAAGTAGATTCCTTCTGGATATTATAATCG 31259854 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| ||||| || ||||| || | || | || |||||||| || Sbjct 31259855 GCCAAAGTACGACCATCCTCCAACTGCTTTCCAGCAAAAATTAGTCTCTGCTGGTCAGGA 31259914 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||| |||||||| ||||||||| || | || | || || ||| ||| Sbjct 31259915 GGAATGCCCTCTTTATCCTGAATTTTTGCCTTCACATTATCAATTGTATCAGAACTCTCA 31259974 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | || || || || || || || |||||||| ||||| Sbjct 31259975 ACCTCCAAAGTTATGGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCAT 31260024 Score = 104 bits (114), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||||||| || | |||||| || ||||| || |||||||||||||| Sbjct 31287074 ATCCCACCTCGAAGCCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATATTATAATCA 31287133 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| ||||| || || || ||| | || | | |||||||| || Sbjct 31287134 GCCAGAGTACGGCCATCTTCCAACTGCTTGCCCGCGAAAATTAGCCTCTGCTGGTCTGGA 31287193 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 |||||||| ||||| || ||||| ||| ||| | || | || | || || ||| || Sbjct 31287194 GGAATGCCCTCTTTGTCCTGAATCTTTGCTTTCA-CGTTGTCAATTGTATCAGAACTTTC 31287252 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | || || ||||| ||||| || |||||||| ||||| Sbjct 31287253 AACCTCCAAAGTTATTGTCTTTCCGGTAAGAGTCTTCACAAAAATCTGCAT 31287303 Score = 100 bits (110), Expect = 3e-16 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGAC--GGTTTTAGAATCGT 45189 || ||||| || ||||||||||| ||||| ||||||| ||||| ||| | ||| | Sbjct 36294991 ACAAGATGAAGGGTTGATTCCTTCTGGATGTTATAAT--CTGACAAGGTCCTTCCATCTT 36294934 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 | | || ||||| || | ||||| | ||||||||| || |||||||| || || || Sbjct 36294933 CAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCCCTCCTTGTCCA 36294874 Query 45250 GAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTT 45309 |||| || || | || | ||||| || ||| || || | ||||| ||||| Sbjct 36294873 GAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCAACCTCCAAAGTAATCGTTT 36294814 Query 45310 TGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| || || |||||||| ||||| Sbjct 36294813 TTCCAGTTAGGGTCTTAACAAAAATCTGCAT 36294783 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||| || || || ||||| ||||| |||||||| Sbjct 36294100 ATACCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTATAATCA 36294041 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| || ||||| || | |||| || |||||||| || Sbjct 36294040 GCAAGGGTACGCCCATCCTCCAGCTGCTTTCCAGCAAAAATCAGACGCTGCTGGTCAGGT 36293981 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||| ||| || | |||| ||| || ||| ||| Sbjct 36293980 GGGATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCA 36293921 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||||||| | || || || || || || || || || ||||||||| Sbjct 36293920 ACTTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTAACGAAGATTTGCATC 36293870 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||||||| || | ||| || || ||||||||||| || |||||||| Sbjct 31287302 ATACCACCACGAAGCCTCAAAACCAAATGGAGGGTCGATTCCTTTTGAATGTTATAATCA 31287361 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || | || || || || | || | | ||||| || || Sbjct 31287362 GCAAGGGTCCTTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCGGGA 31287421 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || || ||||||||||| || ||| | || | || || ||| ||| Sbjct 31287422 GGGATACCCTCCTTATCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCA 31287481 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| ||||| ||||| || || ||||||||||||||||| Sbjct 31287482 ACCTCCAAAGTAATAGTTTTTCCGGTAAGGGTCTTTACAAAAATTTGCAT 31287531 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||| ||| || ||||| || || || || || |||||||||||||| Sbjct 36294784 ATACCACCACGAAGCCGCAAGACAAGATGAAGAGTCGACTCTTTCTGGATATTATAATCA 36294725 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || || | ||| ||||| || | ||||| | ||||||||| || Sbjct 36294724 GCCAGAGTTCGACCGTCTTCAAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGG 36294665 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || || || ||||| || || || | || | ||||| || ||| Sbjct 36294664 GGAATACCCTCCTTGTCTTGTATCTTGGCCTTCACATTGTCAATTGTGTCCGAGCTCTCT 36294605 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| || ||||| || ||||| || |||||||| ||||| Sbjct 36294604 ACCTCCAAAGTAATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 36294555 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||||||| || | ||| || || || ||||| ||||| ||||||||| Sbjct 31260023 ATACCCCCACGAAGCCTCAAAACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAATCG 31260082 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || | ||| || | || || || || | || | | || || || || Sbjct 31260083 GCAAGTGTCCTTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCAGGA 31260142 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || || || ||||||||||| || ||| | || | || || ||| ||| Sbjct 31260143 GGGATACCCTCCTTATCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCA 31260202 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| ||||| || |||| ||| || |||||||||||||| Sbjct 31260203 ACCTCCAAAGTAATAGTTTTTCCAGTTAAAGTCTTAACAAAAATTTGCAT 31260252 >seq8 Length=45569985 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||| || || |||||||||||||| |||||||| Sbjct 6167942 ATACCACCACGGAGACGGAGCACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCA 6167883 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| || || || || | |||| ||| |||||||| || Sbjct 6167882 GCAAGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGT 6167823 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||||||| || | |||| ||| || ||| ||| Sbjct 6167822 GGGATTCCTTCCTTGTCTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCA 6167763 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||||||| | || ||||| || || || || || || ||||||||| Sbjct 6167762 ACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATTTGCATC 6167712 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || || || || || |||||||| ||||| || || ||| || || || ||| Sbjct 36460067 ACAAGGTGAAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCGAGAGTGCGTCCGTCTTCC 36460008 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 || || ||||| ||| | || | ||||||||||| || ||||| ||||| ||||| || Sbjct 36460007 AACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTATCCTGG 36459948 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || ||||| || | |||||||||||||| || ||||| || | ||| || Sbjct 36459947 ATCTTGGCTTTGACATTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTTATCGTCTTC 36459888 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || ||||| ||||| || || || |||||| Sbjct 36459887 CCTGTTAGGGTTTTCACGAAGATCTGCATC 36459858 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || ||||| || ||||| |||||||| | |||| | ||| || Sbjct 6168605 ACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCTGCCAAGGTTCTGCCATCTTCA 6168546 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || ||||| || | ||||| | ||||||||| || ||||||||||| || || ||| Sbjct 6168545 AGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGA 6168486 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || || | || | ||||| || ||| || || | ||||| |||||| Sbjct 6168485 ATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCCACCTCCAAAGTAATCGTTTTT 6168426 Query 45312 CCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || || |||||||| ||||| Sbjct 6168425 CCAGTTAGGGTCTTAACAAAAATCTGCAT 6168397 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||| || || || ||||||||||| |||||||| Sbjct 35000593 ATACCACCACGGAGACGGAGCACCAAATGAAGGGTAGACTCCTTTTGGATGTTATAATCC 35000652 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| |||||| || || | || | || ||||| || || Sbjct 35000653 GCAAGGGTACGCCCATCCTCCAGTTGTTTGCCAGCAAAAATGAGACGCTGCTGATCAGGT 35000712 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||| || || | |||| ||| || ||| ||| Sbjct 35000713 GGGATCCCTTCCTTGTCTTGAATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCA 35000772 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||||||| | || ||||| || || || || || |||||||||||| Sbjct 35000773 ACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAAATTTGCATC 35000823 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || ||||| || | ||||||||||||||||| || |||||||| || || || |||||| Sbjct 34999993 TGCTTTCCAGCAAAAATCAATCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATT 35000052 Query 45255 TTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCG 45314 || || | || | ||||| || ||| || || | ||||| |||||||| Sbjct 35000053 TTAGCCTTCACATTGTCAATAGTGTCTGAGCTCTCTACCTCCAAAGTAATTGTTTTGCCA 35000112 Query 45315 GTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || || ||||| ||||| Sbjct 35000113 GTAAGAGTCTTCACGAAAATCTGCAT 35000138 >seq6 Length=35275713 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | ||| | ||| || || || ||||||||||| || ||||| Sbjct 24039313 ATCCCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCA 24039254 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| ||| |||| || || || || | |||| || |||||||| || Sbjct 24039253 GCAAGGGTACGCCCATCCTCCAGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGT 24039194 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || |||||||||||| || | |||| ||| || ||| ||| Sbjct 24039193 GGGATTCCTTCCTTGTCTTGAATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCA 24039134 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||||||||||| | || ||||| || ||||| || || || ||||||||| Sbjct 24039133 ACTTCGAGAGTGATGGTCTTGCCAGTAAGAGTCTTGACGAATATTTGCATC 24039083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451990843362520