Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq1013 307 4e-79 >seq1013 Length=3469 Score = 307 bits (340), Expect = 4e-79 Identities = 265/328 (81%), Gaps = 0/328 (0%) Strand=Plus/Minus Query 9109 GCATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCC 9168 |||||||||| || |||||||| ||||||||||||||||||||||| || |||||| | Sbjct 335 GCATGGCATCAGTGAACAAAGTGATCCTCGTCGGCAATCTCGGCGCAGATCCGGAAGTGC 276 Query 9169 GCTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACA 9228 | | || |||||||||||||| || | || || ||||||||||||||||||||||||| Sbjct 275 GACATCTGCCGAGCGGCGACGCGGTCGCGAACATTCGTCTCGCGACGACCGATCGCTACA 216 Query 9229 AGGACAAGGCGAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCG 9288 ||||||| || ||||| ||||| || | ||||||||||| || ||||| ||||| | Sbjct 215 AGGACAAAGCATCAGGCGACTTCAAAGAGATCACCGAGTGGCATCGTGTCGCCTTCTTTG 156 Query 9289 GCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGAGG 9348 ||||||| || ||||||||| | || | || ||||| | || ||||||||||| | Sbjct 155 GCCGCCTTGCGGAGATCGTCAGCCAGTATCTGAAAAAGGGATCTTCCGTCTACATCGAAG 96 Query 9349 GGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGA 9408 | |||||| |||||||| ||||||| ||| |||||||||||||||| ||||||||| Sbjct 95 GCCGCATCCGCACGCGGAAATGGCAGGGGCAAGACGGCCAGGATCGCTACTCGACCGAGA 36 Query 9409 TCGTCGCCGACAGGATGCAGATGCTCGG 9436 | ||||| ||| |||||||||||||| Sbjct 35 TTGTCGCTGACCAAATGCAGATGCTCGG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200557854175932