Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18]
2,187 sequences; 412,924,424 total letters
Query= NC_012743.2
Length=62715
Score E
Sequences producing significant alignments: (Bits) Value
seq1013 307 4e-79
>seq1013
Length=3469
Score = 307 bits (340), Expect = 4e-79
Identities = 265/328 (81%), Gaps = 0/328 (0%)
Strand=Plus/Minus
Query 9109 GCATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCC 9168
|||||||||| || |||||||| ||||||||||||||||||||||| || |||||| |
Sbjct 335 GCATGGCATCAGTGAACAAAGTGATCCTCGTCGGCAATCTCGGCGCAGATCCGGAAGTGC 276
Query 9169 GCTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACA 9228
| | || |||||||||||||| || | || || |||||||||||||||||||||||||
Sbjct 275 GACATCTGCCGAGCGGCGACGCGGTCGCGAACATTCGTCTCGCGACGACCGATCGCTACA 216
Query 9229 AGGACAAGGCGAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCG 9288
||||||| || ||||| ||||| || | ||||||||||| || ||||| ||||| |
Sbjct 215 AGGACAAAGCATCAGGCGACTTCAAAGAGATCACCGAGTGGCATCGTGTCGCCTTCTTTG 156
Query 9289 GCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGAGG 9348
||||||| || ||||||||| | || | || ||||| | || ||||||||||| |
Sbjct 155 GCCGCCTTGCGGAGATCGTCAGCCAGTATCTGAAAAAGGGATCTTCCGTCTACATCGAAG 96
Query 9349 GGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGA 9408
| |||||| |||||||| ||||||| ||| |||||||||||||||| |||||||||
Sbjct 95 GCCGCATCCGCACGCGGAAATGGCAGGGGCAAGACGGCCAGGATCGCTACTCGACCGAGA 36
Query 9409 TCGTCGCCGACAGGATGCAGATGCTCGG 9436
| ||||| ||| ||||||||||||||
Sbjct 35 TTGTCGCTGACCAAATGCAGATGCTCGG 8
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200557854175932
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |