Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq1005 109 1e-19 seq1029 105 2e-18 >seq1005 Length=3539 Score = 109 bits (120), Expect = 1e-19 Identities = 82/95 (86%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 8971 CCTAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTG 9030 ||||||||||| ||||| |||||||| |||||||||||| |||| ||| ||| |||| Sbjct 96 CCTAAGGAAACGCTGATTTATTCGGCTCGGCGGTCATCGCAGACGTAGCCGAGGACGTT- 38 Query 9031 TAGAAAGAAGCTCACGGAACGGACCCACGACGATG 9065 ||||| ||||||||||||||||||||||||||| Sbjct 37 TAGAAGACAGCTCACGGAACGGACCCACGACGATG 3 >seq1029 Length=3368 Score = 105 bits (116), Expect = 2e-18 Identities = 81/95 (85%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 8971 CCTAAGGAAACACTGATCAATTCGGCTTGGCGGTCATCGCTGACGAGGCCAAGGGCGTTG 9030 |||| |||||| ||||| |||||||| |||||||||||| |||| ||| ||| |||| Sbjct 96 CCTAGGGAAACGCTGATTTATTCGGCTCGGCGGTCATCGCAGACGTAGCCGAGGACGTT- 38 Query 9031 TAGAAAGAAGCTCACGGAACGGACCCACGACGATG 9065 ||||| ||||||||||||||||||||||||||| Sbjct 37 TAGAAGACAGCTCACGGAACGGACCCACGACGATG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119030508623012