Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq10 607 9e-169 seq2187 554 5e-153 seq4 554 5e-153 seq7 549 2e-151 seq1 545 3e-150 seq3 167 3e-36 >seq10 Length=496089 Score = 607 bits (672), Expect = 9e-169 Identities = 732/993 (74%), Gaps = 2/993 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 |||||| | ||| |||| |||||| | || | ||||| | || ||||||||||| || Sbjct 201346 TTCTGCAACTGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTG 201287 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| | || || || ||||| || Sbjct 201286 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATCGCTGCCCC 201228 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | || ||||| | ||| || || | ||||||||||| Sbjct 201227 TCCAGTAGATATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAA 201168 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || ||||| ||||| || |||| |||| || ||||| | ||||| |||||||| Sbjct 201167 TATTATCTCTGGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAAT 201108 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 ||||||||| || | | |||||||||||||| |||||||||||||| || | | | Sbjct 201107 TTGGGAAGCTGCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 201048 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAG 168849 | |||||| || | || | || || |||||| | |||||||| | | | | Sbjct 201047 TCTACACTTCTTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCG 200988 Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGC 168909 || |||||| | |||||||| |||||| |||||||| || || | || || ||| Sbjct 200987 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGC 200928 Query 168910 AGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAAT 168969 || ||| | | ||||| ||||||| || || ||||||||||||||| ||||||| Sbjct 200927 TGTTTTCTTGATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAAT 200868 Query 168970 TTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCC 169029 ||||| || |||||||| ||| | |||||||| |||||||||||||| ||||||||||| Sbjct 200867 CTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCC 200808 Query 169030 CTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGG 169089 ||||| ||| ||| ||||| ||| | ||||| || || |||||| || |||||||| Sbjct 200807 ATTCCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGG 200748 Query 169090 TTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 ||| | ||||| ||| | | ||||| || |||||||| | |||||| || | || Sbjct 200747 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGG 200688 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 |||||| || |||||||| ||||| || ||||||||||| || || ||||| || || || Sbjct 200687 TTACAAATTTGGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGG 200628 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 ||||||||||||| ||||| |||||||||||||| | | | ||||||||| | || Sbjct 200627 CCGATTAATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGC 200568 Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 169329 | | || || ||| | | ||||| || || | ||||| |||| ||||| ||||| Sbjct 200567 TGCTTGGCCTGTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAA 200508 Query 169330 CTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTAC 169389 | | || || || || || |||||||| || || ||| | | ||| | ||| || Sbjct 200507 CCTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAACAC 200448 Query 169390 ATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 169449 |||| ||| | ||||| | || ||||||||||||||||||||||| || ||||| || Sbjct 200447 CTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGC 200388 Query 169450 TCACAACTTCCCACTAGACTTAGCATCTGCTGA 169482 |||||||||||| ||||||||||| ||| ||| Sbjct 200387 TCACAACTTCCCTCTAGACTTAGCTGCTGTTGA 200355 >seq2187 Length=124033 Score = 554 bits (614), Expect = 5e-153 Identities = 717/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || Sbjct 122539 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 122598 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| | || || || || || || Sbjct 122599 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATCGCAGCTCC 122657 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | || ||||| | || ||||| | || |||||||| Sbjct 122658 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 122717 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || |||| |||| || |||||| | ||||| ||||| || Sbjct 122718 TATTATTTCTGGTGCCATTATTCCTACTTCGGCGGCTATCGGTTTGCACTTTTACCCGAT 122777 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| || | | ||||| |||||||| || || |||||||| | | | | Sbjct 122778 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 122837 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACA 168848 | |||||| || | || | || ||||||||| | |||||||| ||| | | Sbjct 122838 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC- 122896 Query 168849 GACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTG 168908 | || |||||| | |||||||| |||||| |||||||| || || | || || || Sbjct 122897 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 122956 Query 168909 CAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAA 168968 |||| ||| | | |||||| ||||||| || || || ||||||||||||||||||| Sbjct 122957 CAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAA 123016 Query 168969 TTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATC 169028 | || || || |||||||| ||| | ||||| || || ||||| || ||||||||||||| Sbjct 123017 TCTCCGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 123076 Query 169029 CCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATG 169088 | || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||| | Sbjct 123077 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACG 123136 Query 169089 GTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATG 169148 |||| | ||||| ||| | | ||||| || || || || | |||||| || | | Sbjct 123137 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 123196 Query 169149 GTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCG 169208 |||||| ||||||||||| |||||||||||||||||||| || || ||||| || || | Sbjct 123197 GTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTG 123256 Query 169209 GTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAG 169268 | |||| |||||||| ||||| ||||||||||| || | | | || |||||||||| Sbjct 123257 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 123316 Query 169269 CAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 169328 | | | || || ||| || | ||||| ||| | | |||||| | || ||||| |||| Sbjct 123317 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCA 123376 Query 169329 ACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTA 169388 |||| || || || |||||||||||||| || || ||| | | ||| | ||| | Sbjct 123377 ACTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACA 123436 Query 169389 CATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 169448 | |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| | Sbjct 123437 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 123496 Query 169449 CTCACAACTTCCCACTAGACTTAGC 169473 |||| |||||||| |||||| |||| Sbjct 123497 CTCATAACTTCCCTCTAGACCTAGC 123521 >seq4 Length=56582383 Score = 554 bits (614), Expect = 5e-153 Identities = 717/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Plus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || Sbjct 18304208 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 18304267 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| | || || || || || || Sbjct 18304268 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATCGCAGCTCC 18304326 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | || ||||| | || ||||| | || |||||||| Sbjct 18304327 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 18304386 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || |||| |||| || |||||| | ||||| ||||| || Sbjct 18304387 TATTATTTCTGGTGCCATTATTCCTACTTCGGCGGCTATCGGTTTGCACTTTTACCCGAT 18304446 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| || | | ||||| |||||||| || || |||||||| | | | | Sbjct 18304447 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 18304506 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACA 168848 | |||||| || | || | || ||||||||| | |||||||| ||| | | Sbjct 18304507 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC- 18304565 Query 168849 GACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTG 168908 | || |||||| | |||||||| |||||| |||||||| || || | || || || Sbjct 18304566 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 18304625 Query 168909 CAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAA 168968 |||| ||| | | |||||| ||||||| || || || ||||||||||||||||||| Sbjct 18304626 CAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAA 18304685 Query 168969 TTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATC 169028 | || || || |||||||| ||| | ||||| || || ||||| || ||||||||||||| Sbjct 18304686 TCTCCGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 18304745 Query 169029 CCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATG 169088 | || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||| | Sbjct 18304746 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACG 18304805 Query 169089 GTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATG 169148 |||| | ||||| ||| | | ||||| || || || || | |||||| || | | Sbjct 18304806 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 18304865 Query 169149 GTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCG 169208 |||||| ||||||||||| |||||||||||||||||||| || || ||||| || || | Sbjct 18304866 GTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTG 18304925 Query 169209 GTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAG 169268 | |||| |||||||| ||||| ||||||||||| || | | | || |||||||||| Sbjct 18304926 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 18304985 Query 169269 CAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 169328 | | | || || ||| || | ||||| ||| | | |||||| | || ||||| |||| Sbjct 18304986 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCA 18305045 Query 169329 ACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTA 169388 |||| || || || |||||||||||||| || || ||| | | ||| | ||| | Sbjct 18305046 ACTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACA 18305105 Query 169389 CATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 169448 | |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| | Sbjct 18305106 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 18305165 Query 169449 CTCACAACTTCCCACTAGACTTAGC 169473 |||| |||||||| |||||| |||| Sbjct 18305166 CTCATAACTTCCCTCTAGACCTAGC 18305190 Score = 89.7 bits (98), Expect = 6e-13 Identities = 109/142 (77%), Gaps = 14/142 (10%) Strand=Plus/Minus Query 168850 ACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTT-- 168907 ||| |||||| | ||||||| |||||| |||||||| || || |||||| || Sbjct 525507 ACTGGGTATGCGCTCTTGGATTGTTGTTGCATATTCAGCTCCTGT---TGCAGCTGTTAC 525451 Query 168908 -GCAGTATTCCTTG-TATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAG 168965 ||||| ||||||| | |||||| |||| || |||| || |||||||||||||||| Sbjct 525450 TGCAGT-TTCCTTGATCTACCCAATTGGA-AG----CTTT-TCAGATGGTATGCCTCTAG 525398 Query 168966 GAATTTCTGGAACATTCAACTT 168987 |||| ||||| || |||||||| Sbjct 525397 GAATCTCTGGTACTTTCAACTT 525376 >seq7 Length=49172423 Score = 549 bits (608), Expect = 2e-151 Identities = 716/985 (73%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 168491 TTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTA 168550 ||||| | ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || Sbjct 6942878 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 6942819 Query 168551 ATGATCCCATGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACC 168609 |||||||| ||||| || ||| | | ||| || ||| | || || || || || || Sbjct 6942818 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATCGCAGCTCC 6942760 Query 168610 ACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAA 168669 || || ||||| || || || | || ||||| | || ||||| | || |||||||| Sbjct 6942759 TCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAA 6942700 Query 168670 CATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAAT 168729 || || || ||||| || |||| |||| | |||||| | ||||| ||||| || Sbjct 6942699 TATTATTTCTGGTGCCATTATTCCTACTTCGGCGACTATCGGTTTGCACTTTTACCCGAT 6942640 Query 168730 TTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAAT 168789 |||||||| || | | ||||| |||||||| || || |||||||| | | | | Sbjct 6942639 ATGGGAAGCTGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGT 6942580 Query 168790 CTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACA 168848 | |||||| || | || | || ||||||||| | |||||||| ||| | | Sbjct 6942579 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC- 6942521 Query 168849 GACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTG 168908 | || |||||| | |||||||| |||||| |||||||| || || | || || || Sbjct 6942520 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTG 6942461 Query 168909 CAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAA 168968 |||| ||| | | |||||| ||||||| || || || ||||||||||||||||||| Sbjct 6942460 CAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAA 6942401 Query 168969 TTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATC 169028 | || || || |||||||| ||| | ||||| || || ||||| || ||||||||||||| Sbjct 6942400 TCTCCGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATC 6942341 Query 169029 CCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATG 169088 | || || ||| ||| ||||| ||| | ||||| || || ||||| || ||||| | Sbjct 6942340 CATTTCACATGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACG 6942281 Query 169089 GTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATG 169148 |||| | ||||| ||| | | ||||| || || || || | |||||| || | | Sbjct 6942280 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 6942221 Query 169149 GTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCG 169208 |||||| ||||||||||| |||||||||||||||||||| || || ||||| || || | Sbjct 6942220 GTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTG 6942161 Query 169209 GTAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAG 169268 | |||| |||||||| ||||| ||||||||||| || | | | || |||||||||| Sbjct 6942160 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAG 6942101 Query 169269 CAGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCA 169328 | | | || || ||| || | ||||| ||| | | |||||| | || ||||| |||| Sbjct 6942100 CTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCA 6942041 Query 169329 ACTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTA 169388 |||| || || || |||||||||||||| || || ||| | | ||| | ||| | Sbjct 6942040 ACTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACA 6941981 Query 169389 CATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACG 169448 | |||| ||| | ||||| | || ||||||||||||||||| |||||||| ||||| | Sbjct 6941980 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 6941921 Query 169449 CTCACAACTTCCCACTAGACTTAGC 169473 |||| |||||||| |||||| |||| Sbjct 6941920 CTCATAACTTCCCTCTAGACCTAGC 6941896 Score = 302 bits (334), Expect = 5e-77 Identities = 443/623 (71%), Gaps = 4/623 (1%) Strand=Plus/Minus Query 168851 CTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCA 168910 || |||||| | |||||||| | |||| ||||||| || || | || || |||| Sbjct 5597271 CTGGGTATGCGCCCTTGGATTGTTATTGCATATTCAGTTCCTGTTGCAGCTGCTAGTGCA 5597212 Query 168911 GTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATT 168970 || ||| | | |||||| ||||||| || || || |||||||||||||||||||| Sbjct 5597211 GTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATC 5597152 Query 168971 TCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCC 169030 | ||| || |||||||| | | | ||||| || | ||||| || |||||||||||| | Sbjct 5597151 TATGGTACTTTCAACTTTACGATTGTATTTCAGGTTGAGCATAATATTCTTATGCATTCA 5597092 Query 169031 TTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGT 169090 || || ||| ||| ||||| ||| | || | || || ||||| |||||| | Sbjct 5597091 TTTCACATGTTAGGTGTAGCTGGTGTATTTGACGGTTCCCTATTTAGTAATATGCATTCT 5597032 Query 169091 TCACTTGTAACATCTTCTC-TAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGG 169149 || ||||| | ||||| |||||| || || | | | |||||| || | || Sbjct 5597031 TC-CTTGTTAA--CTTCTAATAATCAAGGAAACCATAAAAAATGAATCTGCTAATGAAGG 5596975 Query 169150 TTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGG 169209 ||||| ||||||||||| |||||||||||||||||||| | || |||| || || || Sbjct 5596974 TTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTAGTTGCTTATGGTTATTTTGG 5596915 Query 169210 TAGATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGC 169269 |||| |||||||| ||||| ||||||||||| || | | | || ||||||||||| Sbjct 5596914 CTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGC 5596855 Query 169270 AGTGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAA 169329 | | || | ||| || | | ||| ||| | |||||| || || || ||||| Sbjct 5596854 TGCTTGGCCTATAGTAGGTATCTAGTTTACCGCGTAAGGTATCAACACTATAGCTTTCAA 5596795 Query 169330 CTTGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTAC 169389 || || || || || ||| |||||||||| || ||| | | ||| | ||| || Sbjct 5596794 TTTAAATGGTTTCAATTTTTACCAATCAGTAGTTGATAGTCAAGGTTGTGTAATTAACAC 5596735 Query 169390 ATGGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGC 169449 |||| ||| | || || | | ||||||||||||||||| |||||||| ||||| || Sbjct 5596734 CTGGGCTGATATTGTTGACCGTGTTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 5596675 Query 169450 TCACAACTTCCCACTAGACTTAG 169472 ||| ||||||| |||||| ||| Sbjct 5596674 TCATAACTTCCATCTAGACCTAG 5596652 >seq1 Length=52991155 Score = 545 bits (604), Expect = 3e-150 Identities = 709/975 (73%), Gaps = 4/975 (0%) Strand=Plus/Minus Query 168500 TGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCA 168559 ||| |||| |||||| | ||| | ||||| |||| ||||| ||||| || |||||||| Sbjct 38651360 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 38651301 Query 168560 TGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACCACCTGTCGA 168618 ||||| || ||| | | ||| || ||| | || || || || || || || || || Sbjct 38651300 ACCTTATTGACCGCAACTTC-TGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGA 38651242 Query 168619 TATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTC 168678 ||| || || || | || ||||| | || ||||| | | |||||||| || || || Sbjct 38651241 TATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTCCGGAAACAATATTATTTC 38651182 Query 168679 AGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGC 168738 ||||| || |||| |||| || |||||| | ||||| ||||| || |||||||| Sbjct 38651181 TGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGC 38651122 Query 168739 AGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTT 168798 || | | ||||| |||||||| || || |||||||| | | | | | ||||| Sbjct 38651121 TGCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTT 38651062 Query 168799 CCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAA-TTATCATACAGACTAGGTA 168857 | || | || | || ||||||||| | |||||||| ||| | | | || |||| Sbjct 38651061 CTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTC-GTCTGGGTA 38651003 Query 168858 TGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCC 168917 || | |||||||| |||||| |||||||| || || | || || |||||| ||| Sbjct 38651002 TGCGCCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCT 38650943 Query 168918 TTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAA 168977 | | |||||| ||||||| || || || |||||||||||||||||||| ||||| | Sbjct 38650942 TGATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTA 38650883 Query 168978 CATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATA 169037 | |||||||| ||| | ||||| || || ||||| || |||||||||||||| || || | Sbjct 38650882 CTTTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACA 38650823 Query 169038 TGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTG 169097 || ||| ||||| ||| | ||||| || || ||||| || ||||| ||||| | | Sbjct 38650822 TGTTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGG 38650763 Query 169098 TAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGT 169157 |||| ||| | | ||||| || || || || | |||||| || | ||||||| | Sbjct 38650762 TAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGAT 38650703 Query 169158 TCGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAA 169217 |||||||||| |||||||||||||||||||| || || ||||| || || || |||||| Sbjct 38650702 TCGGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTAA 38650643 Query 169218 TCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCC 169277 ||||||| ||||| ||||||||||| || | | | || ||||||||||| | | | Sbjct 38650642 TCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGC 38650583 Query 169278 CAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACG 169337 | || ||| || | || || ||| | | |||||| | || ||||| |||||||| || | Sbjct 38650582 CTGTAGTAGGTATCTGATTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATG 38650523 Query 169338 GATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGGGGTG 169397 | || |||||||||||||| || || ||| | | ||| | ||| || |||| || Sbjct 38650522 GTTTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTG 38650463 Query 169398 ACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACT 169457 | | ||||| | || ||||||||||||||||| |||||||| ||||| ||||| |||| Sbjct 38650462 ATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACT 38650403 Query 169458 TCCCACTAGACTTAG 169472 | || |||||| ||| Sbjct 38650402 TTCCTCTAGACCTAG 38650388 >seq3 Length=55515152 Score = 167 bits (184), Expect = 3e-36 Identities = 194/262 (74%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 169212 GATTAATCTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAG 169271 |||| |||||||| ||||| ||||||||||| | | | | || ||||||||||| | Sbjct 40133074 GATTGATCTTCCAATATGCTAGTTTCAACAATTTTCGTTCTTTACATTTCTTCCTAGCTG 40133133 Query 169272 TGTTCCCAGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACT 169331 | || || ||| || | ||||| ||| | | |||||| | || ||||| ||||||| Sbjct 40133134 CTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACT 40133193 Query 169332 TGAACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACAT 169391 | || || || |||||||||||||| || || ||| | | ||| | ||| || | Sbjct 40133194 TAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCT 40133253 Query 169392 GGGGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTC 169451 ||| ||| | |||| | || |||||||||||| |||| |||||||| ||||| |||| Sbjct 40133254 GGGCTGATATTATTAATCGTGCTAACCTTGGTATGAAAGTTATGCATGAACGTAATGCTC 40133313 Query 169452 ACAACTTCCCACTAGACTTAGC 169473 | |||||||| |||||| |||| Sbjct 40133314 ATAACTTCCCTCTAGACCTAGC 40133335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564426169577760