Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq10 558 5e-154 seq2187 497 2e-135 seq4 497 2e-135 seq7 491 7e-134 seq1 482 3e-131 seq3 118 2e-21 >seq10 Length=496089 Score = 558 bits (618), Expect = 5e-154 Identities = 707/972 (73%), Gaps = 0/972 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| |||||| | ||| | || ||||| ||||| | ||||| ||| | | | | Sbjct 201325 ACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCTACCTTATTGACC 201266 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || ||||||||||| ||||| || ||||| || || || Sbjct 201265 GCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGATATTGATGGTATT 201206 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| ||||||||||| | ||||| ||||| || |||||||||||| || | Sbjct 201205 CGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCTGGTGCTATTATT 201146 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || |||||||| ||||| ||||| || |||||||| ||| | ||||| Sbjct 201145 CCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCTGCATCTGTTGAT 201086 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 || ||| | ||||||||||| |||| | || || | | |||||| | ||||| | Sbjct 201085 GAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTA 201026 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || || || | ||||||||||| || | | | |||||| | |||||||| Sbjct 201025 GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGTCCTTGGATT 200966 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| ||| || ||| | | || || | Sbjct 200965 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATTTACCCTATT 200906 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || ||||||| |||||| | ||||||||||| || ||||||| ||| Sbjct 200905 GGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAATCTCTGGTACTTTCAACTTTATG 200846 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| |||||||| ||||||||||| || ||||| |||||||||||||||||||| ||| Sbjct 200845 ATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTCCACATGTTAGGTGTAGCT 200786 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| ||||| | ||| ||| ||||| ||||| | || || ||| | | Sbjct 200785 GGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTG 200726 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || ||||| | |||||| || | |||||||| || || |||||||| Sbjct 200725 ATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTTGGTCAAGAGGAA 200666 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 || || || || || || ||||| || ||||| ||||| || | ||||||||||| || Sbjct 200665 GAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCT 200606 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 |||||||||||| | | | ||||||||| | || || | ||||| | | ||| Sbjct 200605 AGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCTGTAGTAGGAATC 200546 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| ||||| | ||| | |||||||| |||||||| || |||||||| |||||| Sbjct 200545 TGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGTTTCAATTTCAAC 200486 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || ||||| || || ||| || ||| || ||||| || || ||||| | Sbjct 200485 CAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGT 200426 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || ||||||||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct 200425 GCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTCCCTCTAGACTTA 200366 Query 216275 GCTGCTGCTGAA 216286 ||||||| |||| Sbjct 200365 GCTGCTGTTGAA 200354 >seq2187 Length=124033 Score = 497 bits (550), Expect = 2e-135 Identities = 689/965 (71%), Gaps = 0/965 (0%) Strand=Plus/Plus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| |||| ||||||||||| | ||||| ||| | | | | Sbjct 122560 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 122619 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || |||||||| || ||||| || ||||| || || || Sbjct 122620 GCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATT 122679 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | || || ||||| || || |||||||| || | Sbjct 122680 CGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATT 122739 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || ||||| || ||||| ||||| || |||||||| ||| | ||||| Sbjct 122740 CCTACTTCGGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGAT 122799 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||| || || |||| |||| || | | |||||| | ||||| | Sbjct 122800 GAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 122859 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | |||||| | |||||||| Sbjct 122860 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATT 122919 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| |||||| ||| | | || ||| | Sbjct 122920 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATT 122979 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || || |||| |||||| || |||||||| || || ||||||| ||| Sbjct 122980 GGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACTTTCAACTTTATG 123039 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| || ||||||||||| || ||||| ||||| ||||| |||||||||||||| ||| Sbjct 123040 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCT 123099 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| ||||| | || ||| ||||||||||| | || || ||| | | Sbjct 123100 GGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTG 123159 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| || | ||||||| ||||| |||||||| Sbjct 123160 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 123219 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| || || || |||||||| || ||||| ||||| || | ||||||||||| || Sbjct 123220 GAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 123279 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 ||||||||| || | | | || |||||||| || || | ||||| | ||||| Sbjct 123280 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 123339 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| || || | ||| || |||||||| |||||| | || ||||||||||| ||| Sbjct 123340 TGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAACTTTAAC 123399 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || || || || || ||| || ||| || ||||| || || ||||| | Sbjct 123400 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGT 123459 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||| ||||| || ||||| ||||| |||||||| ||||| | Sbjct 123460 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 123519 Query 216275 GCTGC 216279 ||||| Sbjct 123520 GCTGC 123524 >seq4 Length=56582383 Score = 497 bits (550), Expect = 2e-135 Identities = 689/965 (71%), Gaps = 0/965 (0%) Strand=Plus/Plus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| |||| ||||||||||| | ||||| ||| | | | | Sbjct 18304229 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 18304288 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || |||||||| || ||||| || ||||| || || || Sbjct 18304289 GCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATT 18304348 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | || || ||||| || || |||||||| || | Sbjct 18304349 CGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATT 18304408 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || ||||| || ||||| ||||| || |||||||| ||| | ||||| Sbjct 18304409 CCTACTTCGGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGAT 18304468 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||| || || |||| |||| || | | |||||| | ||||| | Sbjct 18304469 GAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 18304528 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | |||||| | |||||||| Sbjct 18304529 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATT 18304588 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| |||||| ||| | | || ||| | Sbjct 18304589 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATT 18304648 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || || |||| |||||| || |||||||| || || ||||||| ||| Sbjct 18304649 GGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACTTTCAACTTTATG 18304708 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| || ||||||||||| || ||||| ||||| ||||| |||||||||||||| ||| Sbjct 18304709 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCT 18304768 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| ||||| | || ||| ||||||||||| | || || ||| | | Sbjct 18304769 GGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTG 18304828 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| || | ||||||| ||||| |||||||| Sbjct 18304829 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 18304888 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| || || || |||||||| || ||||| ||||| || | ||||||||||| || Sbjct 18304889 GAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 18304948 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 ||||||||| || | | | || |||||||| || || | ||||| | ||||| Sbjct 18304949 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 18305008 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| || || | ||| || |||||||| |||||| | || ||||||||||| ||| Sbjct 18305009 TGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAACTTTAAC 18305068 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || || || || || ||| || ||| || ||||| || || ||||| | Sbjct 18305069 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGT 18305128 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||| ||||| || ||||| ||||| |||||||| ||||| | Sbjct 18305129 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 18305188 Query 216275 GCTGC 216279 ||||| Sbjct 18305189 GCTGC 18305193 Score = 136 bits (150), Expect = 6e-27 Identities = 186/257 (72%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCT---C 215371 ||||| || ||| | ||| |||| ||||||||||| | ||||| ||| | | | | Sbjct 18031090 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 18031031 Query 215372 GCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGA 215431 ||| || | | | ||| || | || |||||||| || ||||| || ||||| || || Sbjct 18031030 GCAACTTC--CGTATTT-ATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGT 18030974 Query 215432 ATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTT 215491 || | ||||| ||| |||| ||| || | || || ||||| || || |||||||| || Sbjct 18030973 ATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATT 18030914 Query 215492 GTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTT 215551 | |||| ||| || ||||| || ||||| ||||| || |||||||| ||| | ||| Sbjct 18030913 ATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCAATATGGGAAGCTGCATCCGTT 18030854 Query 215552 GACGAATGGCTCTACAA 215568 || |||||| | ||||| Sbjct 18030853 GATGAATGGTTATACAA 18030837 Score = 102 bits (112), Expect = 1e-16 Identities = 171/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 215339 TGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCG-CAGCTACCACT-TGTTTCATCGTAG 215396 ||||||||||| | |||| ||| | ||| ||| | || || || | |||| | | | Sbjct 525768 TGGTTTGGTGTTTTGATGA-TCCCTACCTTATCGACCGCAACTTCTGTATTTC-TTATCG 525711 Query 215397 CATTCATCGCTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTT 215456 | |||||||| || ||||| || | ||| || || || | ||||| ||| |||| ||| Sbjct 525710 CTTTCATCGCAGCCCCTCCAGTAGTTATTGATGGTATTCGTGAGCCTGTTTCTGGATCTC 525651 Query 215457 TAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGAT 215516 | | || || || || || || | |||||| |||| |||| ||| || ||| | | Sbjct 525650 AACTTTACGGAAATAATATTATTTATGGTGCCATTGTTCCTACTTCTGCGGCTATCAGTT 525591 Query 215517 TACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGAC 215576 | ||||| ||||| || |||||||| ||| ||||| |||||| ||||| || || | Sbjct 525590 TGCACTTTTACCCGATATGGGAAGCTGCATTTGTTGATGAATGGTCATACAACGGCGGTC 525531 Query 215577 CT 215578 || Sbjct 525530 CT 525529 >seq7 Length=49172423 Score = 491 bits (544), Expect = 7e-134 Identities = 688/965 (71%), Gaps = 0/965 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| |||| ||||||||||| | ||||| ||| | | | | Sbjct 6942857 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 6942798 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || |||||||| || ||||| || ||||| || || || Sbjct 6942797 GCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATT 6942738 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | || || ||||| || || |||||||| || | Sbjct 6942737 CGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATT 6942678 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| | ||||| || ||||| ||||| || |||||||| ||| | ||||| Sbjct 6942677 CCTACTTCGGCGACTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGAT 6942618 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||| || || |||| |||| || | | |||||| | ||||| | Sbjct 6942617 GAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 6942558 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | |||||| | |||||||| Sbjct 6942557 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATT 6942498 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| |||||| ||| | | || ||| | Sbjct 6942497 GCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATT 6942438 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || || |||| |||||| || |||||||| || || ||||||| ||| Sbjct 6942437 GGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACTTTCAACTTTATG 6942378 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| || ||||||||||| || ||||| ||||| ||||| |||||||||||||| ||| Sbjct 6942377 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCT 6942318 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| ||||| | || ||| ||||||||||| | || || ||| | | Sbjct 6942317 GGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTG 6942258 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| || | ||||||| ||||| |||||||| Sbjct 6942257 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 6942198 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| || || || |||||||| || ||||| ||||| || | ||||||||||| || Sbjct 6942197 GAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCT 6942138 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 ||||||||| || | | | || |||||||| || || | ||||| | ||||| Sbjct 6942137 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 6942078 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 ||| || || | ||| || |||||||| |||||| | || ||||||||||| ||| Sbjct 6942077 TGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAACTTTAAC 6942018 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || || || || || ||| || ||| || ||||| || || ||||| | Sbjct 6942017 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGT 6941958 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||| ||||| || ||||| ||||| |||||||| ||||| | Sbjct 6941957 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTA 6941898 Query 216275 GCTGC 216279 ||||| Sbjct 6941897 GCTGC 6941893 Score = 239 bits (264), Expect = 7e-58 Identities = 439/639 (69%), Gaps = 6/639 (1%) Strand=Plus/Minus Query 215634 AGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCAC 215693 |||||||||| | || | | |||||| | |||||||| | |||| || || | | Sbjct 5597289 AGTGGGAACTGTTTTC--GTCTGGGTATGCGCCCTTGGATTGTTATTGCATATTCAGTTC 5597232 Query 215694 CTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTG 215753 |||| | ||||| |||||| ||| | | || ||| | ||||| || || || | Sbjct 5597231 CTGTTGCAGCTGCTAGTGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAG 5597172 Query 215754 ATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGC 215813 ||| |||||| || ||||||| ||| || ||||||| | | |||| || |||| ||||| Sbjct 5597171 ATGGTATGCCTCTAGGAATCTATGGTACTTTCAACTTTACGATTGTATTTCAGGTTGAGC 5597112 Query 215814 ACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCAT 215873 | || ||||| ||||| |||| |||||||||||||| |||||||| || | ||||| Sbjct 5597111 ATAATATTCTTATGCATTCATTTCACATGTTAGGTGTAGCTGGTGTATTTGACGGTTCCC 5597052 Query 215874 TGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCT-CTAATCAGAGAGACAACTGAG 215932 | || | ||||| ||| |||||| | ||||| |||||| || || | | Sbjct 5597051 TATTTAGTAATATGCATTCTTC-CTTGTT--AACTTCTAATAATCAAGGAAACCATAAAA 5596995 Query 215933 CAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTA 215992 | |||||| || | ||||||| ||||| |||||||| ||||| || || || ||| Sbjct 5596994 AATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGTA 5596935 Query 215993 GCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGA 216052 | ||| | ||||| ||||| | | ||||||||||| || ||||||||| || | Sbjct 5596934 GTTGCTTATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGT 5596875 Query 216053 AGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGT 216112 | | || |||||||| || || | ||| | | |||||| | || || ||| Sbjct 5596874 TCTTTACATTTCTTCCTAGCTGCTTGGCCTATAGTAGGTATCTAGTTTACCGCGTAAGGT 5596815 Query 216113 GTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCA 216172 || ||||| || ||||| | || |||||||| || |||| || || || || Sbjct 5596814 ATCAACACTATAGCTTTCAATTTAAATGGTTTCAATTTTTACCAATCAGTAGTTGATAGT 5596755 Query 216173 TCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAA 216232 ||| || ||| || ||||| || || || || | | |||||||||||| Sbjct 5596754 CAAGGTTGTGTAATTAACACCTGGGCTGATATTGTTGACCGTGTTAACCTTGGTATGGAA 5596695 Query 216233 GTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGAC 216271 || ||||| || ||||| ||||| ||||||| ||||| Sbjct 5596694 GTTATGCATGAACGTAATGCTCATAACTTCCATCTAGAC 5596656 >seq1 Length=52991155 Score = 482 bits (534), Expect = 3e-131 Identities = 686/965 (71%), Gaps = 0/965 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| |||| ||||||||||| | ||||| ||| | | | | Sbjct 38651348 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 38651289 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || |||||||| || ||||| || ||||| || || || Sbjct 38651288 GCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATT 38651229 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | | || ||||| || || |||||||| || | Sbjct 38651228 CGTGAGCCTGTTTCTGGATCTCTACTTTCCGGAAACAATATTATTTCTGGTGCCATTATT 38651169 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| || ||||| || ||||| ||||| || |||||||| ||| | ||||| Sbjct 38651168 CCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGAT 38651109 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGTATT 215614 |||||| | ||||| || || |||| |||| || | | |||||| | ||||| | Sbjct 38651108 GAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTA 38651049 Query 215615 TCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGATTAGGTATGAGACCTTGGATC 215674 || ||| || | ||||||||||| || | | |||||| | |||||||| Sbjct 38651048 GCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATT 38650989 Query 215675 TGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCAGTATTCCTTGTGTATCCATTC 215734 |||||| || || || ||||| | ||||| |||||| ||| | | || ||| | Sbjct 38650988 GTTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTGATCTACCCAATT 38650929 Query 215735 GGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATG 215794 ||||| || || || |||| |||||| || ||||||||||| || ||||||| ||| Sbjct 38650928 GGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATG 38650869 Query 215795 TTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCT 215854 |||| || ||||||||||| || ||||| ||||| ||||| |||||||||||||| ||| Sbjct 38650868 ATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATGTTAGGTGTAGCT 38650809 Query 215855 GGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTA 215914 ||||| ||||| ||||| | || ||| ||||||||||| | || || ||| | | Sbjct 38650808 GGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTG 38650749 Query 215915 ATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAG 215974 ||||| || || || || | |||||| || | ||||||| ||||| |||||||| Sbjct 38650748 ATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAA 38650689 Query 215975 GAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCA 216034 ||||| || || || |||||||| || ||||| ||||| || | ||||||||||| || Sbjct 38650688 GAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTAATCTTCCAATATGCT 38650629 Query 216035 TCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATC 216094 ||||||||| || | | | || |||||||| || || | ||||| | ||||| Sbjct 38650628 AGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATC 38650569 Query 216095 TGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAAC 216154 || || || | ||| || |||||||| |||||| | || ||||||||||| ||| Sbjct 38650568 TGATTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGTTTCAACTTTAAC 38650509 Query 216155 CAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGA 216214 || || || || || ||| || ||| || ||||| || || ||||| | Sbjct 38650508 CAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGATATTATTAACCGT 38650449 Query 216215 GCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGACTTG 216274 || |||||||||||||| ||||| || ||||| ||||| ||||| || ||||| | Sbjct 38650448 GCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTTCCTCTAGACCTA 38650389 Query 216275 GCTGC 216279 | ||| Sbjct 38650388 GTTGC 38650384 Score = 140 bits (154), Expect = 5e-28 Identities = 209/297 (70%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 215315 ACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCTTGCCTCCTCGCA 215374 ||||| || ||| | ||| |||| ||||||||||| | ||||| ||| | | | | Sbjct 25175174 ACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACC 25175115 Query 215375 GCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGATATCGACGGAATC 215434 || || || || || | || |||||||| || ||||| || ||||| || || || Sbjct 25175114 GCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGATATTGATGGTATT 25175055 Query 215435 AGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCTGGTGCTGTTGTA 215494 | ||||| ||| |||| ||| || | || || ||||| || || |||||||| || | Sbjct 25175054 CGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATT 25174995 Query 215495 CCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCAGCAACAGTTGAC 215554 |||| ||| | ||||| || ||||| ||||| || |||||||| ||| | ||||| Sbjct 25174994 CCTACTTCGGCGACTATCGGTTTGCACTTTTACCCGATATGGGAAGCTGCATCCGTTGAT 25174935 Query 215555 GAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATCTTCCACTTCCTCATTGGT 215611 |||||| | ||||| || || | || |||| || | | |||||| | ||||| Sbjct 25174934 GAATGGTTATACAACGGCGGTCATTATGAACTAATTGTTCTACACTTCTTACTTGGT 25174878 >seq3 Length=55515152 Score = 118 bits (130), Expect = 2e-21 Identities = 191/275 (69%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 216005 TACTTTGGTCGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTC 216064 || ||||| || | ||||||||||| || ||||||||| | | | | || ||| Sbjct 40133064 TATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTTTCGTTCTTTACATTTC 40133123 Query 216065 TTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATG 216124 ||||| || || | ||||| | |||||||| || || | ||| || |||||| Sbjct 40133124 TTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATG 40133183 Query 216125 GCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTT 216184 || |||||| | || ||||||||||| ||||| || || || || ||| || Sbjct 40133184 GCTTTCAACTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTA 40133243 Query 216185 ATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAG 216244 ||| || ||||| || || |||| | || ||||||||| |||| ||||| || Sbjct 40133244 ATTAACACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGAAAGTTATGCATGAA 40133303 Query 216245 CGTAACGCTCACAACTTCCCATTAGACTTGGCTGC 216279 ||||| ||||| |||||||| ||||| | ||||| Sbjct 40133304 CGTAATGCTCATAACTTCCCTCTAGACCTAGCTGC 40133338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745061231331760