Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq10 560 1e-154 seq2187 526 3e-144 seq4 526 3e-144 seq7 522 3e-143 seq1 513 2e-140 seq3 161 1e-34 seq2 123 3e-23 >seq10 Length=496089 Score = 560 bits (620), Expect = 1e-154 Identities = 714/983 (73%), Gaps = 0/983 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | || || | || | || ||||||||||| ||||||||||| Sbjct 201337 TGGATAACTAGCACTGAAAATCGTCTTTACATCGGATGGTTCGGTGTTTTGATGATCCCT 201278 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | || |||||||| || || || || || Sbjct 201277 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATCGCTGCCCCTCCAGTAGAT 201218 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | ||||| || | ||||| ||||| || |||||| Sbjct 201217 ATTGATGGTATTCGCGAGCCTGTTTCTGGTTCTTTACTTTATGGAAACAATATTATCTCT 201158 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || ||||| | ||||| || || ||||||||||| Sbjct 201157 GGTGCTATTATTCCTACTTCTGCGGCGATCGGATTGCACTTTTACCCAATTTGGGAAGCT 201098 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| || | ||||||||||| || || |||||||||||| | || || | | |||||| Sbjct 201097 GCATCTGTTGATGAGTGGTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTC 201038 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || || |||||| | |||||||||| | |||| | |||||| Sbjct 201037 TTACTTGGTGTAGCTTGTTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATG 200978 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 ||||||||||| ||| |||||||| ||||| || |||| || ||||| ||||| Sbjct 200977 CGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTG 200918 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || ||| | ||||| ||| || || || || |||||| |||| ||||| ||||| Sbjct 200917 ATTTACCCTATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTTTAGGAATCTCTGGTACT 200858 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | |||||||| |||||||||||||| |||||||| |||||||| ||| Sbjct 200857 TTCAACTTTATGATTGTATTCCAGGCAGAGCACAACATCCTTATGCATCCATTCCACATG 200798 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || ||| || ||||| ||||| | ||| Sbjct 200797 TTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTCAGTGCTATGCATGGTTCCTTGGTA 200738 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || || || || || || || | || |||||||| Sbjct 200737 ACCTCTAGTTTGATCAGGGAAACTACTGAAAATGAATCTGCTAATGAGGGTTACAAATTT 200678 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| ||||| || || || ||||| || || ||||| || ||||| || | ||| Sbjct 200677 GGTCAAGAGGAAGAGACTTATAATATTGTGGCTGCTCATGGTTATTTTGGCCGATTAATC 200618 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || ||||| |||| | | ||||||||| | ||| | | ||| Sbjct 200617 TTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTCTTGGCTGCTTGGCCT 200558 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| ||| | | |||||| | || ||||| || ||||| ||||| Sbjct 200557 GTAGTAGGAATCTGGTTCACTGCTTTAGGTATTAGTACTATGGCTTTCAACCTAAATGGT 200498 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || || |||||||| || | || ||| | ||| ||| || || ||||| || Sbjct 200497 TTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGAT 200438 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| | || ||||| ||||||||||||||||| || |||||||| ||||||||| Sbjct 200437 ATTATTAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAACGTAATGCTCACAACTTC 200378 Query 170659 CCACTTGACTTGGCAACTGCTGA 170681 || || ||||| || ||| ||| Sbjct 200377 CCTCTAGACTTAGCTGCTGTTGA 200355 >seq2187 Length=124033 Score = 526 bits (582), Expect = 3e-144 Identities = 698/969 (72%), Gaps = 0/969 (0%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 122548 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 122607 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | ||||||||||||||||| || || || Sbjct 122608 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGAT 122667 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || ||| Sbjct 122668 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCT 122727 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || |||||||| Sbjct 122728 GGTGCCATTATTCCTACTTCGGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCT 122787 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || ||||| ||||||||| || || || | | |||||| Sbjct 122788 GCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTC 122847 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | |||||||||| | ||| | |||||| Sbjct 122848 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATG 122907 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || || || ||||| Sbjct 122908 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTG 122967 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || || | ||||| ||| || ||||| || ||||||||||| ||||| ||||| Sbjct 122968 ATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACT 123027 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | ||||| || || ||||| || ||||||||||| ||||| || ||| Sbjct 123028 TTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATG 123087 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || || || ||||||||||| | ||| Sbjct 123088 TTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTA 123147 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 123148 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 123207 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || ||||| || || ||||| || ||||| || | ||| Sbjct 123208 GGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATC 123267 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| |||| | | || |||||||| ||| | | ||| Sbjct 123268 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCT 123327 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| || | | ||||| |||| ||||| || ||| | ||||| Sbjct 123328 GTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGT 123387 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || ||||| ||||| || | || ||| | ||| ||| || || ||||| || Sbjct 123388 TTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGAT 123447 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| | || ||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct 123448 ATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 123507 Query 170659 CCACTTGAC 170667 || || ||| Sbjct 123508 CCTCTAGAC 123516 >seq4 Length=56582383 Score = 526 bits (582), Expect = 3e-144 Identities = 698/969 (72%), Gaps = 0/969 (0%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 18304217 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 18304276 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | ||||||||||||||||| || || || Sbjct 18304277 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGAT 18304336 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || ||| Sbjct 18304337 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCT 18304396 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || |||||||| Sbjct 18304397 GGTGCCATTATTCCTACTTCGGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCT 18304456 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || ||||| ||||||||| || || || | | |||||| Sbjct 18304457 GCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTC 18304516 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | |||||||||| | ||| | |||||| Sbjct 18304517 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATG 18304576 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || || || ||||| Sbjct 18304577 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTG 18304636 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || || | ||||| ||| || ||||| || ||||||||||| ||||| ||||| Sbjct 18304637 ATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACT 18304696 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | ||||| || || ||||| || ||||||||||| ||||| || ||| Sbjct 18304697 TTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATG 18304756 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || || || ||||||||||| | ||| Sbjct 18304757 TTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTA 18304816 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 18304817 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 18304876 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || ||||| || || ||||| || ||||| || | ||| Sbjct 18304877 GGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATC 18304936 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| |||| | | || |||||||| ||| | | ||| Sbjct 18304937 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCT 18304996 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| || | | ||||| |||| ||||| || ||| | ||||| Sbjct 18304997 GTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGT 18305056 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || ||||| ||||| || | || ||| | ||| ||| || || ||||| || Sbjct 18305057 TTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGAT 18305116 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| | || ||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct 18305117 ATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 18305176 Query 170659 CCACTTGAC 170667 || || ||| Sbjct 18305177 CCTCTAGAC 18305185 Score = 132 bits (146), Expect = 6e-26 Identities = 190/268 (71%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 18031102 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 18031043 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | || ||||| | ||||||||||||||||| || || || Sbjct 18031042 ACCTTATTGACCGCAACTTCCGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGAT 18030983 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || ||| Sbjct 18030982 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCT 18030923 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || |||||||| Sbjct 18030922 GGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCAATATGGGAAGCT 18030863 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACG 169966 ||| | | ||||| ||||| || |||| Sbjct 18030862 GCATCCGTTGATGAATGGTTATACAACG 18030835 Score = 95.1 bits (104), Expect = 1e-14 Identities = 171/245 (70%), Gaps = 10/245 (4%) Strand=Plus/Minus Query 169735 TGGTTCGGTGTCTTGATGATCCCATGTCTATTAGCAGCAGCAAC--CTGC-TTTATCGTT 169791 ||||| ||||| ||||||||||| | ||| | | ||||| ||| ||| | | Sbjct 525768 TGGTTTGGTGTTTTGATGATCCC---TACCTTATCGACCGCAACTTCTGTATTTCTTATC 525712 Query 169792 GCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCA 169851 |||||||||||||| || || || | || ||||| || | || ||||| | || || Sbjct 525711 GCTTTCATCGCAGCCCCTCCAGTAGTTATTGATGGTATTCGTGAGCCTGTTTCTGGATC- 525653 Query 169852 TTCA--TGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 169909 ||| | || || || || || || | |||||| ||||||| |||| || ||| Sbjct 525652 -TCAACTTTACGGAAATAATATTATTTATGGTGCCATTGTTCCTACTTCTGCGGCTATCA 525594 Query 169910 GTCTCCACTTCTATCCTATTTGGGAAGCAGCAACTCTAGATGAGTGGTTGTATAACGGTG 169969 || | ||||| || || || |||||||| ||| | | ||||| |||| || ||||| | Sbjct 525593 GTTTGCACTTTTACCCGATATGGGAAGCTGCATTTGTTGATGAATGGTCATACAACGGCG 525534 Query 169970 GTCCT 169974 ||||| Sbjct 525533 GTCCT 525529 >seq7 Length=49172423 Score = 522 bits (578), Expect = 3e-143 Identities = 697/969 (72%), Gaps = 0/969 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 6942869 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 6942810 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | ||||||||||||||||| || || || Sbjct 6942809 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGAT 6942750 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || ||| Sbjct 6942749 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCT 6942690 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| | |||||| | ||||| || || || |||||||| Sbjct 6942689 GGTGCCATTATTCCTACTTCGGCGACTATCGGTTTGCACTTTTACCCGATATGGGAAGCT 6942630 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || ||||| ||||||||| || || || | | |||||| Sbjct 6942629 GCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTC 6942570 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | |||||||||| | ||| | |||||| Sbjct 6942569 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATG 6942510 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || || || ||||| Sbjct 6942509 CGCCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTG 6942450 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || || | ||||| ||| || ||||| || ||||||||||| ||||| ||||| Sbjct 6942449 ATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCCGGTACT 6942390 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | ||||| || || ||||| || ||||||||||| ||||| || ||| Sbjct 6942389 TTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATG 6942330 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || || || ||||||||||| | ||| Sbjct 6942329 TTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTA 6942270 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 6942269 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 6942210 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || ||||| || || ||||| || ||||| || | ||| Sbjct 6942209 GGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTGATC 6942150 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| |||| | | || |||||||| ||| | | ||| Sbjct 6942149 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCT 6942090 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | |||||||| || | | ||||| |||| ||||| || ||| | ||||| Sbjct 6942089 GTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGT 6942030 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || ||||| ||||| || | || ||| | ||| ||| || || ||||| || Sbjct 6942029 TTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGAT 6941970 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| | || ||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct 6941969 ATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTC 6941910 Query 170659 CCACTTGAC 170667 || || ||| Sbjct 6941909 CCTCTAGAC 6941901 Score = 262 bits (290), Expect = 5e-65 Identities = 482/700 (69%), Gaps = 10/700 (1%) Strand=Plus/Minus Query 169971 TCCTTATCAATTAGTTATCTTCCACTTCCTTATCGGAATCTCTGCCTACATGGGTAGACA 170030 ||||||| || || || | | |||||| | | || | || | ||| ||| | | Sbjct 5597348 TCCTTATGAACTAATTGTTATACACTTCTTACTTGGTGTAGCTTGTTCCATCGGTCGTGA 5597289 Query 170031 GTGGGAACTATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCC 170090 ||||||||| | | ||| | |||||||| |||||||| | | |||||||| | ||| Sbjct 5597288 GTGGGAACTGTTTT--CGTCTGGGTATGCGCCCTTGGATTGTTATTGCATATTCAGTTCC 5597231 Query 170091 AGTGTCAGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGA 170150 || |||| || || || ||||| | || || | ||||| ||| || ||||| Sbjct 5597230 TGTTGCAGCTGCTAGTGCAGTTTTCTTGATCTACCCAATTGGTCAAGGAAGCTTTTCAGA 5597171 Query 170151 CGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCA 170210 || ||||||||||| |||| ||||| || ||||| | | | ||||| || | ||||| Sbjct 5597170 TGGTATGCCTCTAGGAATCTATGGTACTTTCAACTTTACGATTGTATTTCAGGTTGAGCA 5597111 Query 170211 CAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATGTTCGGAGGAGCACT 170270 || ||||||||||| |||| || ||| ||| || |||||| | || | || | || Sbjct 5597110 TAATATTCTTATGCATTCATTTCACATGTTAGGTGTAGCTGGTGTATTTGACGGTTCCCT 5597051 Query 170271 CTTCTCAGCAAT--GCACGGTTCACTTGTAACATCTTCTC-TAATCAGAGAGACAACAGA 170327 || || ||| ||| ||| ||||| | ||||| |||||| || || | | | Sbjct 5597050 ATTT--AGTAATATGCATTCTTC-CTTGTTAA--CTTCTAATAATCAAGGAAACCATAAA 5596996 Query 170328 TAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACATACAACATTGT 170387 || || || || | || |||| |||||| ||||| |||||||| || || ||||| Sbjct 5596995 AAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTATAATATTGT 5596936 Query 170388 TGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCG 170447 | || |||| || ||||| || | ||||||||||||||||| || |||||| ||| Sbjct 5596935 AGTTGCTTATGGTTATTTTGGCTGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCG 5596876 Query 170448 TAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGG 170507 | | | || |||||||| ||| | | ||| ||||| | |||| ||| || | || Sbjct 5596875 TTCTTTACATTTCTTCCTAGCTGCTTGGCCTATAGTAGGTATCTAGTTTACCGCGTAAGG 5596816 Query 170508 TATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGG 170567 ||| ||| || || || || | ||||| || || || |||| ||| | || ||| | Sbjct 5596815 TATCAACACTATAGCTTTCAATTTAAATGGTTTCAATTTTTACCAATCAGTAGTTGATAG 5596756 Query 170568 ATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGA 170627 ||| ||| || || ||||| || || || || | | ||||| |||||||| Sbjct 5596755 TCAAGGTTGTGTAATTAACACCTGGGCTGATATTGTTGACCGTGTTAACCTTGGTATGGA 5596696 Query 170628 AGTAATGCATGAGCGTAATGCACACAACTTCCCACTTGAC 170667 ||| |||||||| |||||||| || ||||||| || ||| Sbjct 5596695 AGTTATGCATGAACGTAATGCTCATAACTTCCATCTAGAC 5596656 >seq1 Length=52991155 Score = 513 bits (568), Expect = 2e-140 Identities = 695/969 (72%), Gaps = 0/969 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 38651360 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 38651301 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | ||||||||||||||||| || || || Sbjct 38651300 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGAT 38651241 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | | || ||||| || || ||| Sbjct 38651240 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTCCGGAAACAATATTATTTCT 38651181 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || |||||||| Sbjct 38651180 GGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCGATATGGGAAGCT 38651121 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || ||||| ||||||||| || || || | | |||||| Sbjct 38651120 GCATCCGTTGATGAATGGTTATACAACGGCGGTCCTTATGAACTAATTGTTCTACACTTC 38651061 Query 169999 CTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTATG 170058 | | || | || ||||||||| | |||||||||| | ||| | |||||| Sbjct 38651060 TTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGGGTATG 38651001 Query 170059 CGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTTA 170118 || |||||||| ||| |||||||| ||||| || |||| || || || ||||| Sbjct 38651000 CGCCCTTGGATTGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACTGCAGTTTTCTTG 38650941 Query 170119 GTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACA 170178 | || || | ||||| ||| || ||||| || ||||||||||| ||||| ||||| Sbjct 38650940 ATCTACCCAATTGGTCAAGGAAGCTTTTCAGATGGTATGCCTCTAGGAATCTCTGGTACT 38650881 Query 170179 TTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATG 170238 || ||||| ||| | ||||| || || ||||| || ||||||||||| ||||| || ||| Sbjct 38650880 TTCAACTTTATGATTGTATTTCAGGCTGAGCATAATATTCTTATGCATCCATTTCACATG 38650821 Query 170239 GCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTA 170298 ||| || |||||| | ||||| || | || || || ||||||||||| | ||| Sbjct 38650820 TTAGGTGTAGCTGGTGTATTCGGCGGTTCCCTATTTAGTGCTATGCACGGTTCCTTGGTA 38650761 Query 170299 ACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTC 170358 || ||| | | ||||| || || ||||| || || || || | || |||| |||| Sbjct 38650760 ACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTC 38650701 Query 170359 GGACAAGAAGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATC 170418 || ||||| |||||||| || || ||||| || || ||||| || ||||| || | ||| Sbjct 38650700 GGTCAAGAGGAAGAAACCTATAATATTGTAGCTGCTCATGGTTATTTTGGCCGATTAATC 38650641 Query 170419 TTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCT 170478 |||||||||||||| || |||||| |||| | | || |||||||| ||| | | ||| Sbjct 38650640 TTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTAGCTGCTTGGCCT 38650581 Query 170479 GTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGA 170538 |||||| | ||||| || || | | ||||| |||| ||||| || ||| | ||||| Sbjct 38650580 GTAGTAGGTATCTGATTTACCGCGTTAGGTATCAGCACTATGGCTTTCAACTTAAATGGT 38650521 Query 170539 TTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGAC 170598 || ||||| ||||| || | || ||| | ||| ||| || || ||||| || Sbjct 38650520 TTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAACACCTGGGCTGAT 38650461 Query 170599 GTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTC 170658 || ||||| | || ||||| ||||||||||| |||||||| |||||||| || ||||| Sbjct 38650460 ATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTT 38650401 Query 170659 CCACTTGAC 170667 || || ||| Sbjct 38650400 CCTCTAGAC 38650392 Score = 136 bits (150), Expect = 5e-27 Identities = 210/300 (70%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| | ||| | ||||| | || |||| ||||| ||||| ||||||||||| Sbjct 25175186 TGGATAACCAACACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCT 25175127 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | ||||||||||||||||| || || || Sbjct 25175126 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGAT 25175067 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || ||| Sbjct 25175066 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCT 25175007 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| | |||||| | ||||| || || || |||||||| Sbjct 25175006 GGTGCCATTATTCCTACTTCGGCGACTATCGGTTTGCACTTTTACCCGATATGGGAAGCT 25174947 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTTC 169998 ||| | | ||||| ||||| || ||||| |||| |||| || || || | | |||||| Sbjct 25174946 GCATCCGTTGATGAATGGTTATACAACGGCGGTCATTATGAACTAATTGTTCTACACTTC 25174887 >seq3 Length=55515152 Score = 161 bits (178), Expect = 1e-34 Identities = 196/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 170401 TACTTTGGTAGACTTATCTTCCAATATGCTAGCTTTAACAATAGTCGTAGTCTTCACTTC 170460 || ||||| || | ||||||||||||||||| || |||||| |||| | | || ||| Sbjct 40133064 TATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTTTCGTTCTTTACATTTC 40133123 Query 170461 TTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTAACTTCAATGGGTATTTGCACAATG 170520 ||||| ||| | | ||||||||| | |||||||| || | | ||||| |||| ||| Sbjct 40133124 TTCCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTATCAGCACTATG 40133183 Query 170521 GCATTTAACCTTAATGGATTTAACTTCAACCAGTCAATCGTAGATGGATCTGGTAAAGTA 170580 || || ||| | ||||| || ||||| ||||| || | || ||| | ||| ||| Sbjct 40133184 GCTTTCAACTTAAATGGTTTCAACTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTA 40133243 Query 170581 GTTCCTACATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAG 170640 || || ||||| || || |||| | || ||||| |||||| |||| |||||||| Sbjct 40133244 ATTAACACCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGAAAGTTATGCATGAA 40133303 Query 170641 CGTAATGCACACAACTTCCCACTTGAC 170667 |||||||| || |||||||| || ||| Sbjct 40133304 CGTAATGCTCATAACTTCCCTCTAGAC 40133330 >seq2 Length=45729672 Score = 123 bits (136), Expect = 3e-23 Identities = 188/268 (70%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||| |||| ||||| | ||||| | || |||| ||||| |||| ||||||||||| Sbjct 37873737 TGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTTGTGTTTTGATGATCCCT 37873678 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 |||| | ||| | | ||||| | ||||||||||||||||| || || || Sbjct 37873677 ACCTTATTGACCGCAACTTCTGTATTTATTATCGCTTTCATCGCAGCTCCTCCAGTAGAT 37873618 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || ||||| || | || ||||| | || || | | || || ||||| || || ||| Sbjct 37873617 ATTGATGGTATTCGTGAGCCTGTTTCTGGATCTCTACTTTACGGAAACAATATTATTTCT 37873558 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| || |||| |||| || |||||| | ||||| || || || |||||||| Sbjct 37873557 GGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTACCCAATATGGGAAGCT 37873498 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACG 169966 ||| | | ||||| ||||| || |||| Sbjct 37873497 GCATCCGTTGATGAATGGTTATACAACG 37873470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582832066392800