Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq2187 553 5e-153 seq10 553 5e-153 seq4 553 5e-153 seq7 551 2e-152 seq1 536 4e-148 seq3 179 1e-40 seq2 143 8e-30 >seq2187 Length=124033 Score = 553 bits (612), Expect = 5e-153 Identities = 721/991 (73%), Gaps = 10/991 (1%) Strand=Plus/Minus Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251 || ||||| || || |||||||| |||||||| ||||| ||||| ||||||||||||||| Sbjct 123524 GCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 123465 Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACT 5311 || |||||||| | | ||| ||||| ||| || | | ||| | ||||| || Sbjct 123464 TTAGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACG 123405 Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371 || || || ||||| || || || | || |||||||||||| ||| || | | |||| Sbjct 123404 GATTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTA 123345 Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431 | ||| || | || || ||||||| ||| ||||||||||||||| ||| |||||| Sbjct 123344 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTG 123285 Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491 || |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 123284 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAG 123225 Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCA 5551 |||||||||||||| |||||| | || || | || ||| | | || ||||| Sbjct 123224 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 123165 Query 5552 CGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAAT 5611 | || | |||||| || | || ||||||||| || | | || |||||| Sbjct 123164 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAAT 123105 Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 || ||||| ||||| | |||||| || ||||||||||| ||||| || || ||||| ||| Sbjct 123104 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAAT 123045 Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA--CTTC 5729 || | ||||||||| |||||||| ||||| || |||||||||||||| ||||| |||| Sbjct 123044 ACAATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCATC--TGAAAAGCTTC 122987 Query 5730 CCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATAT 5788 | || || | ||||| | || || |||| ||||| | || ||||| || ||||||||| Sbjct 122986 CTTGACCAATTGGGTAGATCAAGAAAACTGCAGTAG-CAGCTGCAACAGGAGCTGAATAT 122928 Query 5789 GCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAG 5848 || || |||||| || ||||| || | | ||||||||||||| | || |||| | Sbjct 122927 GCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATG 122868 Query 5849 TAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAA 5908 ||| || | ||||| | |||||| | || | |||| || || || || ||||| Sbjct 122867 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTAT 122808 Query 5909 AGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGT 5966 | ||||||||| | ||| || |||||||| || || || ||||| || || || || Sbjct 122807 AACCATTCATCAACGGAT--GCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCG 122750 Query 5967 TGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGA 6026 || | || | || ||| || || || || |||||||| || ||||||||||| | | Sbjct 122749 CCGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAA 122690 Query 6027 CGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATG 6086 | || ||||| || || || || || ||||| || || || | ||| || | |||||| Sbjct 122689 CAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATA 122630 Query 6087 CAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGC 6146 ||| ||||||||| || | | || ||||| || ||||||||||| || | || || | Sbjct 122629 CAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGAC 122570 Query 6147 GGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 |||| | ||||| || | ||||| |||||| Sbjct 122569 GGTTTTCAGTGCTGGTTATCCAGTTACAGAA 122539 >seq10 Length=496089 Score = 553 bits (612), Expect = 5e-153 Identities = 720/993 (73%), Gaps = 2/993 (0%) Strand=Plus/Plus Query 5186 TCAGCAGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATA 5245 ||| |||| |||| || || ||||||||||||||||| ||||||||||||||||||||| Sbjct 200355 TCAACAGCAGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATA 200414 Query 5246 CCAAGGTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCA 5305 |||||||| |||||||| | | ||| ||||| ||| || | | ||| | ||| Sbjct 200415 CCAAGGTTAGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCA 200474 Query 5306 ACGACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATA 5365 || || || || ||||| || || || || || || ||||||||||| || || | | Sbjct 200475 ACTACAGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAA 200534 Query 5366 GAGGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTA 5425 | || | ||| || | || || ||||||| ||||| |||||| |||||| ||| Sbjct 200535 GCAGTGAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAG 200594 Query 5426 TTGTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATG 5485 ||||| || |||||||| |||||||| | || ||||| || |||||||| || ||||| Sbjct 200595 TTGTTGAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATA 200654 Query 5486 TTATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTT 5545 ||||| || ||||||||||| || ||||| || || | || ||| | |||| Sbjct 200655 TTATAAGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTA 200714 Query 5546 GTTTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCA 5605 ||||| | || | ||| || || | |||||||||||| ||| | | || Sbjct 200715 GTTTCCCTGATCAAACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCG 200774 Query 5606 CCGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCC 5665 |||||||| ||||| ||||| | ||||||||| |||||||||||||| ||||| |||||| Sbjct 200775 CCGAATACACCAGCTACACCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCTGCC 200834 Query 5666 TGGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA 5725 |||||||| | ||||||||| |||||||||||||| || | ||||||||||||| || Sbjct 200835 TGGAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAG 200894 Query 5726 CTTCCCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGA 5784 ||||| || || | |||||| | || || || | |||| || || ||||| || ||||| Sbjct 200895 CTTCCTTGACCAATAGGGTAAATCAAGAAAACAGCAGTA-GCAGCTGCAACAGGAGCTGA 200953 Query 5785 ATATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCC 5844 |||||| || |||||| || ||||| || | | | ||||||||||||| | || || Sbjct 200954 ATATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACC 201013 Query 5845 CAAGTAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATT 5904 || ||| || | ||||| | |||||| | || | || | || || || ||||| Sbjct 201014 CATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATT 201073 Query 5905 GTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGC 5964 ||| | ||| ||||| | | || |||||||| || || || ||||| || || || || Sbjct 201074 GTATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGC 201133 Query 5965 GTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGC 6024 || | || | || || || || || || ||||||||||| |||| ||| || | Sbjct 201134 CGCAGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGA 201193 Query 6025 GACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAA 6084 || || || || || || || || || ||||| || ||||| | ||| || | ||||| Sbjct 201194 AACAGGCTCGCGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAA 201253 Query 6085 TGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAG 6144 | ||| ||||||||| || | | || ||||| || ||||| ||||| || | || || Sbjct 201254 TACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAG 201313 Query 6145 GCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || || | |||||||| | ||||| ||||| Sbjct 201314 ACGATTTTCAGTGCTAGTTATCCAGTTGCAGAA 201346 >seq4 Length=56582383 Score = 553 bits (612), Expect = 5e-153 Identities = 721/991 (73%), Gaps = 10/991 (1%) Strand=Plus/Minus Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251 || ||||| || || |||||||| |||||||| ||||| ||||| ||||||||||||||| Sbjct 18305193 GCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 18305134 Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACT 5311 || |||||||| | | ||| ||||| ||| || | | ||| | ||||| || Sbjct 18305133 TTAGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACG 18305074 Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371 || || || ||||| || || || | || |||||||||||| ||| || | | |||| Sbjct 18305073 GATTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTA 18305014 Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431 | ||| || | || || ||||||| ||| ||||||||||||||| ||| |||||| Sbjct 18305013 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTG 18304954 Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491 || |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 18304953 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAG 18304894 Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCA 5551 |||||||||||||| |||||| | || || | || ||| | | || ||||| Sbjct 18304893 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 18304834 Query 5552 CGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAAT 5611 | || | |||||| || | || ||||||||| || | | || |||||| Sbjct 18304833 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAAT 18304774 Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 || ||||| ||||| | |||||| || ||||||||||| ||||| || || ||||| ||| Sbjct 18304773 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAAT 18304714 Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA--CTTC 5729 || | ||||||||| |||||||| ||||| || |||||||||||||| ||||| |||| Sbjct 18304713 ACAATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCATC--TGAAAAGCTTC 18304656 Query 5730 CCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATAT 5788 | || || | ||||| | || || |||| ||||| | || ||||| || ||||||||| Sbjct 18304655 CTTGACCAATTGGGTAGATCAAGAAAACTGCAGTAG-CAGCTGCAACAGGAGCTGAATAT 18304597 Query 5789 GCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAG 5848 || || |||||| || ||||| || | | ||||||||||||| | || |||| | Sbjct 18304596 GCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATG 18304537 Query 5849 TAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAA 5908 ||| || | ||||| | |||||| | || | |||| || || || || ||||| Sbjct 18304536 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTAT 18304477 Query 5909 AGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGT 5966 | ||||||||| | ||| || |||||||| || || || ||||| || || || || Sbjct 18304476 AACCATTCATCAACGGAT--GCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCG 18304419 Query 5967 TGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGA 6026 || | || | || ||| || || || || |||||||| || ||||||||||| | | Sbjct 18304418 CCGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAA 18304359 Query 6027 CGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATG 6086 | || ||||| || || || || || ||||| || || || | ||| || | |||||| Sbjct 18304358 CAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATA 18304299 Query 6087 CAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGC 6146 ||| ||||||||| || | | || ||||| || ||||||||||| || | || || | Sbjct 18304298 CAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGAC 18304239 Query 6147 GGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 |||| | ||||| || | ||||| |||||| Sbjct 18304238 GGTTTTCAGTGCTGGTTATCCAGTTACAGAA 18304208 Score = 143 bits (158), Expect = 8e-30 Identities = 199/277 (72%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 5903 TTGTAAAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAA 5960 ||||| | ||||||||| | ||| || |||||||| || || || ||||| || || | Sbjct 18030837 TTGTATAACCATTCATCAACGGAT--GCAGCTTCCCATATTGGGTAAAAGTGCAAACCGA 18030894 Query 5961 TTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATC 6020 | || || | || | || ||| || || || || |||||||| || |||||||||| Sbjct 18030895 TAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATC 18030954 Query 6021 CTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATA 6080 | | || || ||||| || || || || || ||||| || || || | ||| || | | Sbjct 18030955 CAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAA 18031014 Query 6081 TAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACAT 6140 ||||| | | ||||||||| || | | || ||||| || ||||||||||| || | | Sbjct 18031015 TAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGT 18031074 Query 6141 AGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 | || ||||| | ||||| || | ||||| |||||| Sbjct 18031075 AAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 18031111 Score = 98.7 bits (108), Expect = 3e-16 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 5894 GGTCCTCCATTGTAAAGCCATTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGT 5953 || || || ||||| ||||||||| | | || |||||||| || || || ||||| Sbjct 525530 GGACCGCCGTTGTATGACCATTCATCAACAAATGCAGCTTCCCATATCGGGTAAAAGTGC 525589 Query 5954 AACCCAATTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGT 6013 || | || || || | || |||| ||| || | || || || ||||| || ||| Sbjct 525590 AAACTGATAGCCGCAGAAGTAGGAACAATGGCACCATAAATAATATTATTTCCGTAAAGT 525649 Query 6014 AGAGATCCTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAAT 6073 ||||||| | || || ||||| || || || || | ||||| || || || | ||| Sbjct 525650 TGAGATCCAGAAACAGGCTCACGAATACCATCAATAACTACTGGAGGGGCTGCGATGAAA 525709 Query 6074 GCTAATATAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCA 6132 || | | |||| ||| ||||||||| | | | || ||||| || ||||||||||| Sbjct 525710 GCGATAAGAAATACAGAAGTTGCGGTCGATAAGGTAGGGATCATCAAAACACCAAACCA 525768 >seq7 Length=49172423 Score = 551 bits (610), Expect = 2e-152 Identities = 723/992 (73%), Gaps = 12/992 (1%) Strand=Plus/Plus Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251 || ||||| || || |||||||| |||||||| ||||| ||||| ||||||||||||||| Sbjct 6941893 GCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGG 6941952 Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACT 5311 || |||||||| | | ||| ||||| ||| || | | ||| | ||||| || Sbjct 6941953 TTAGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACG 6942012 Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371 || || || ||||| || || || | || |||||||||||| ||| || | | |||| Sbjct 6942013 GATTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTA 6942072 Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431 | ||| || | || || ||||||| ||| ||||||||||||||| ||| |||||| Sbjct 6942073 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTG 6942132 Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATAC 5491 || |||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| Sbjct 6942133 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAG 6942192 Query 5492 GTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCA 5551 |||||||||||||| |||||| | || || | || ||| | | || ||||| Sbjct 6942193 GTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCC 6942252 Query 5552 CGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAAT 5611 | || | |||||| || | || ||||||||| || | | || |||||| Sbjct 6942253 CTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAAT 6942312 Query 5612 ACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 || ||||| ||||| | |||||| || ||||||||||| ||||| || || ||||| ||| Sbjct 6942313 ACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAAT 6942372 Query 5672 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA--CTTC 5729 || | ||||||||| |||||||| ||||| || ||||||||||||| |||||| |||| Sbjct 6942373 ACAATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCAT--CTGAAAAGCTTC 6942430 Query 5730 CCTGTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATAT 5788 | || || | ||||| | || || |||| |||| || || ||||| || ||||||||| Sbjct 6942431 CTTGACCAATTGGGTAGATCAAGAAAACTGCAGTA-GCAGCTGCAACAGGAGCTGAATAT 6942489 Query 5789 GCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAG 5848 || || |||||| || ||||| || | | ||||||||||||| | || |||| | Sbjct 6942490 GCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATG 6942549 Query 5849 TAAGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAA 5908 ||| || | ||||| | |||||| | || | |||| || || || || ||||| Sbjct 6942550 TAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTAT 6942609 Query 5909 AGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTG-CG 5965 | ||||||||| | ||| || |||||||| || || || ||||| || || || | || Sbjct 6942610 AACCATTCATCAACGGAT--GCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGTCG 6942667 Query 5966 TTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCG 6025 | || | || | || ||| || || || || |||||||| || ||||||||||| | Sbjct 6942668 CCGAAG-TAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAA 6942726 Query 6026 ACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAAT 6085 || || ||||| || || || || || ||||| || || || | ||| || | |||||| Sbjct 6942727 ACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAAT 6942786 Query 6086 GCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGG 6145 ||| ||||||||| || | | || ||||| || ||||||||||| || | || || Sbjct 6942787 ACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGA 6942846 Query 6146 CGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 ||||| | ||||| || | ||||| |||||| Sbjct 6942847 CGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 6942878 Score = 282 bits (312), Expect = 1e-71 Identities = 478/683 (70%), Gaps = 12/683 (2%) Strand=Plus/Plus Query 5196 CTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGG 5255 |||| || || ||||||| |||||||| ||||| ||||| ||||||||||||||||| Sbjct 5596652 CTAGGTCTAGATGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAA 5596711 Query 5256 CACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACT 5315 |||||| | | ||| ||||| ||| || | | ||| | ||||| ||||| | Sbjct 5596712 CACGGTCAACAATATCAGCCCAGGTGTTAATTACACAACCTTGACTATCAACTACTGATT 5596771 Query 5316 GATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCC 5375 | | || || || || || | ||| ||||| |||||| ||| || | ||||| | Sbjct 5596772 GGTAAAAATTGAAACCATTTAAATTGAAAGCTATAGTGTTGATACCTTACGCGGTAAACT 5596831 Query 5376 ATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGC 5435 | || | || | ||||||| ||| ||||||||||||||| ||| |||||| || | Sbjct 5596832 AGATACCTACTATAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAAC 5596891 Query 5436 TAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTT 5495 ||||||| |||||||| | || ||||| || |||| ||| | ||||| ||||| |||| Sbjct 5596892 TAGCATATTGGAAGATCAATCAGCCAAAATAACCATAAGCAACTACAATATTATAGGTTT 5596951 Query 5496 CTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAA 5555 |||||||||| |||||| | || || | || ||| | | ||||| | Sbjct 5596952 CTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATGGTTTCCTTGA 5597011 Query 5556 TGAGCGAAGAAG-TAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACC 5614 | | ||||| ||||||| ||||||| | || | | || | ||||| Sbjct 5597012 TTA--TTAGAAGTTAACAAG-GAAGAATGCATATTACTAAATAGGGAACCGTCAAATACA 5597068 Query 5615 CCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACG 5674 ||||| ||||| | |||||| || | ||||||||| ||||| || || |||| ||||| Sbjct 5597069 CCAGCTACACCTAACATGTGAAATGAATGCATAAGAATATTATGCTCAACCTGAAATACA 5597128 Query 5675 AACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA--CTTCCCT 5732 | | ||||||| ||||||||| |||| || ||||||||||||| |||||| ||||| | Sbjct 5597129 ATCGTAAAGTTGAAAGTACCATAGATTCCTAGAGGCATACCAT--CTGAAAAGCTTCCTT 5597186 Query 5733 GTCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCT 5791 | || | ||||| | || || |||| | || || || ||||| || |||||||||| Sbjct 5597187 GACCAATTGGGTAGATCAAGAAAACTGCACTA-GCAGCTGCAACAGGAACTGAATATGCA 5597245 Query 5792 ACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAA 5851 | |||||| || ||||| || | | ||| |||||||| | || || | | || Sbjct 5597246 ATAACAATCCAAGGGCGCATACCCAGACGAAAAC--AGTTCCCACTCACGACCGATGGAA 5597303 Query 5852 GCTGCGATACCAATAAGGAAGTG 5874 || | ||||| | |||||| Sbjct 5597304 CAAGCTACACCAAGTAAGAAGTG 5597326 >seq1 Length=52991155 Score = 536 bits (594), Expect = 4e-148 Identities = 714/985 (72%), Gaps = 10/985 (1%) Strand=Plus/Plus Query 5196 CTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGG 5255 |||| || || || ||||| |||||||| ||||| ||||| ||||||||||||||||| | Sbjct 38650388 CTAGGTCTAGAGGAAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAG 38650447 Query 5256 CACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGACT 5315 ||||||| | | ||| ||||| ||| || | | ||| | ||||| || || | Sbjct 38650448 CACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACGGATT 38650507 Query 5316 GATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCC 5375 | || ||||| || || || | || |||||||||||| ||| || | | ||||| | Sbjct 38650508 GGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTAAATC 38650567 Query 5376 ATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGC 5435 | || | || || ||||||| ||| ||||||||||||||| ||| |||||| || | Sbjct 38650568 AGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAAC 38650627 Query 5436 TAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTT 5495 ||||||| |||||||| | || ||||| || |||||||| || ||||| ||||| |||| Sbjct 38650628 TAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTTT 38650687 Query 5496 CTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAA 5555 |||||||||| |||||| | || || | || ||| | | || ||||| | | Sbjct 38650688 CTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGA 38650747 Query 5556 TGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACCC 5615 | | |||||| || | || ||||||||| || | | || |||||||| | Sbjct 38650748 TCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAATACAC 38650807 Query 5616 CAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACGA 5675 |||| ||||| | |||||| || ||||||||||| ||||| || || ||||| ||||| | Sbjct 38650808 CAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAA 38650867 Query 5676 ACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAA--CTTCCCTG 5733 ||||||||| |||||||||||||| || ||||||||||||| |||||| ||||| || Sbjct 38650868 TCATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCAT--CTGAAAAGCTTCCTTG 38650925 Query 5734 TCCGAAAGGGTATACTAAAAATACTG-AGTAGGCTGCGGCAACCGGTGCTGAATATGCTA 5792 || | ||||| | || || |||| |||| || || ||||| || ||||||||||| | Sbjct 38650926 ACCAATTGGGTAGATCAAGAAAACTGCAGTA-GCAGCTGCAACAGGAGCTGAATATGCAA 38650984 Query 5793 CGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAG 5852 | |||||| || ||||| || | | ||||||||||||| | || |||| |||| Sbjct 38650985 CAACAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAAC 38651044 Query 5853 CTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCC 5912 || | ||||| | |||||| | || | |||| || || || || ||||| | || Sbjct 38651045 AAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACC 38651104 Query 5913 ATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGA 5970 ||||||| | ||| || |||||||| || || || ||||| || || || || || Sbjct 38651105 ATTCATCAACGGAT--GCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGA 38651162 Query 5971 GCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGG 6030 | || | || ||| || || || || |||||||| | ||||||||||| | || || Sbjct 38651163 AGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGGAAAGTAGAGATCCAGAAACAGG 38651222 Query 6031 TTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGT 6090 ||||| || || || || || ||||| || || || | ||| || | |||||| ||| Sbjct 38651223 CTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATACAGA 38651282 Query 6091 AGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTT 6150 ||||||||| || | | || ||||| || ||||||||||| || | || || ||||| Sbjct 38651283 AGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTT 38651342 Query 6151 GTTGGTGCTAGTAACCCAGTCACAG 6175 | ||||| || | ||||| |||| Sbjct 38651343 TTCAGTGCTGGTTATCCAGTTACAG 38651367 Score = 147 bits (162), Expect = 7e-31 Identities = 228/321 (71%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 5860 ACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCATTCATC 5919 ||||| | |||||| | || | |||| || | || || ||||| | ||||||||| Sbjct 25174878 ACCAAGTAAGAAGTGTAGAACAATTAGTTCATAATGACCGCCGTTGTATAACCATTCATC 25174937 Query 5920 GA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTG-CGTTGGAGCTGGG 5976 | ||| || |||||||| || || || ||||| || || || | || | || | || Sbjct 25174938 AACGGAT--GCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGTCGCCGAAG-TAGG 25174994 Query 5977 TACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTCACG 6036 | || ||| || || || || |||||||| || ||||||||||| | || || ||||| Sbjct 25174995 AATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACG 25175054 Query 6037 TATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGTTGC 6096 || || || || || ||||| || || || | ||| || | |||||| ||| |||||| Sbjct 25175055 AATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATACAGAAGTTGC 25175114 Query 6097 GGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTTGGT 6156 ||| || | | || ||||| || ||||||||||| || | || || ||||| | || Sbjct 25175115 GGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGT 25175174 Query 6157 GCTAGTAACCCAGTCACAGAA 6177 | | || | ||||| |||||| Sbjct 25175175 GTTGGTTATCCAGTTACAGAA 25175195 >seq3 Length=55515152 Score = 179 bits (198), Expect = 1e-40 Identities = 206/277 (74%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 5192 GCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGG 5251 || ||||| || || |||||||| |||||||| ||||| ||||| |||| |||||||||| Sbjct 40133338 GCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTTCATACCAAGG 40133279 Query 5252 TTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACT 5311 || ||||| || | | ||| ||||| ||| || | | ||| | ||||| || Sbjct 40133278 TTAGCACGATTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACG 40133219 Query 5312 GACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTA 5371 || || || ||||| || || || | || |||||||||||| ||| || | | |||| Sbjct 40133218 GATTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTA 40133159 Query 5372 AGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTA 5431 | ||| || | || || ||||||| ||| ||||||||||||||| ||| |||||| Sbjct 40133158 AACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAAAATTGTTG 40133099 Query 5432 AAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGC 5468 || |||||||| |||||||| | || ||||| |||| Sbjct 40133098 AAACTAGCATATTGGAAGATCAATCGGCCAAAATAGC 40133062 >seq2 Length=45729672 Score = 143 bits (158), Expect = 8e-30 Identities = 199/277 (72%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 5903 TTGTAAAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAA 5960 ||||| | ||||||||| | ||| || |||||||| || || || ||||| || || | Sbjct 37873472 TTGTATAACCATTCATCAACGGAT--GCAGCTTCCCATATTGGGTAAAAGTGCAAACCGA 37873529 Query 5961 TTGCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATC 6020 | || || | || | || ||| || || || || |||||||| || |||||||||| Sbjct 37873530 TAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATC 37873589 Query 6021 CTGCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATA 6080 | | || || ||||| || || || || || ||||| || || || | ||| || | | Sbjct 37873590 CAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAA 37873649 Query 6081 TAAATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACAT 6140 ||||| ||| ||||||||| || | | || ||||| || |||| |||||| || | | Sbjct 37873650 TAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACAAAACCATCCAATGT 37873709 Query 6141 AGAGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 | || ||||| | ||||| || | ||||| |||||| Sbjct 37873710 AAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 37873746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152645635594482