Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq1 150 1e-31 seq6 141 7e-29 seq4 136 3e-27 seq8 134 1e-26 seq7 113 4e-20 >seq1 Length=52991155 Score = 150 bits (166), Expect = 1e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||||| |||||| ||| ||||| || ||||| ||||| || | |||||| |||| || Sbjct 28610801 AACTAGATGAAGCGTACTCTCTTTCTGGATATTATAATCCGCAAGAGTTCTTCCATCTTC 28610742 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||| ||||| |||||||| ||||| || || ||||| || ||||||||||| || ||||| Sbjct 28610741 CAACTGCTTCCCTGCAAAGATCAATCGTTGCTGATCCGGTGGAATGCCTTCCTTGTCTTG 28610682 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||| || || || | || | |||||||| | ||| ||||| || || | ||||| Sbjct 28610681 AATCTTCGCCTTCACGTTGTCGATTGTGTCAGAAGATTCAACTTCCAGGGTTATGGTTTT 28610622 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || |||| ||||| ||||| || |||||| Sbjct 28610621 CCCTGTTAGGGTTTTGACAAAGATTTGCATG 28610591 Score = 145 bits (160), Expect = 6e-30 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | |||||| ||||| ||||| || ||||| ||||| |||| ||| || |||| || Sbjct 28611029 AACAAGATGAAGCGTAGACTCTTTCTGAATATTATAATCAGCGAGAGTCCTCCCATCCTC 28610970 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 | ||| || || ||||| ||||| ||||| ||||| || |||||||| || ||||| || Sbjct 28610969 AAGTTGTTTTCCAGCAAAGATCAATCGCTGCTGATCCGGTGGAATGCCCTCCTTATCCTG 28610910 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 ||| || || || | || | ||| ||||| | ||||| || ||||| | || || Sbjct 28610909 AATCTTGGCCTTCACGTTATCAATAGTATCAGAACTCTCCACCTCTAGAGTAATTGTCTT 28610850 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || || |||||||||||||| Sbjct 28610849 CCCGGTCAACGTCTTCACAAATATCTGCAT 28610820 Score = 125 bits (138), Expect = 6e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||||| || || ||||| || ||||||||||| || | |||||| | Sbjct 28610579 ACGGAGAACAAGGTGAAGCGTGGACTCTTTCTGGATATTGTAATCCGCAAGAGTTCTACC 28610520 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | || || || || || || | ||| ||||| || || ||||| |||||||| Sbjct 28610519 GTCTTCTAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCAGGTGGAATTCCTTCTTT 28610460 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| ||||| ||| || | || | ||||| || | ||| || || || || | Sbjct 28610459 GTCTTGGATTTTGGCTTTGACGTTGTCGATTGTGTCGGATGATTCTACCTCTAGGGTTAT 28610400 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||||||||| || ||||| || || ||||||||| Sbjct 28610399 TGTTTTGCCGGTCAAGGTTTTCACGAAAATCTGCATG 28610363 >seq6 Length=35275713 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||||||||| | ||||| ||||| ||||| || || ||||| || || | ||||| | Sbjct 24039982 ACGTAAAACAAGGTGAAGAGTAGACTCTTTCTGAATGTTGTAGTCAGCAAGGGTTCTTCC 24039923 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||||||||| || ||||| ||||| | ||||||||| || || || ||||| || Sbjct 24039922 ATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGTTGATCTGGTGGGATTCCTTCCTT 24039863 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || |||||| || ||| | || | ||||| || ||||||| || | || | Sbjct 24039862 GTCCTGGATTTTTGCCTTAACATTATCAATGGTGTCTGAACTTTCCACCTCCAATGTAAT 24039803 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || ||||| || ||||| |||||||| Sbjct 24039802 GGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCAT 24039767 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| ||||| || || ||||| || |||||||| || | || | |||| ||| Sbjct 24039292 ACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGCCCATCCTCC 24039233 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| |||| |||||| || || || || || ||||| || |||||| Sbjct 24039232 AGCTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGA 24039173 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 |||||| || ||| | |||| || || || | || ||||| ||||||| || ||| Sbjct 24039172 ATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 24039113 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | ||| || || ||||| ||||| Sbjct 24039112 CCAGTAAGAGTCTTGACGAATATTTGCAT 24039084 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| || || |||||||| || ||||||||||| | ||||||| |||| || | ||| Sbjct 24039514 TGAAGAGTTGACTCTTTTTGGATGTTGTAATCGGCAAGAGTTCTGCCATCTTCAAGCTGC 24039455 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || ||||| || | | ||| || || || || || || || || || ||||| || Sbjct 24039454 TTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATACCCTCCTTGTCCTGAATCTTG 24039395 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 ||| ||| | || | ||| ||||| | ||||| ||||| |||| || || || || Sbjct 24039394 GCTTTGACATTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCAGTG 24039335 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | ||| || || || || ||||| Sbjct 24039334 AGAGTCTTGACGAAGATTTGCAT 24039312 >seq4 Length=56582383 Score = 136 bits (150), Expect = 3e-27 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || ||||| ||||||||||| || || ||||| || |||||||| |||| || | | Sbjct 31287773 CGCAAAACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCGAGCGTGCGCCCG 31287832 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || |||||||||||||| || || || | | ||| ||||| || || || || || ||| Sbjct 31287833 TCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGAGGGATACCCTCCTTA 31287892 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 |||||||| || ||| ||| | || | ||| || || | ||||| || | ||| | Sbjct 31287893 TCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCCACCTCCAAAGTAATA 31287952 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || ||||| |||||||| |||||||| Sbjct 31287953 GTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 31287987 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| |||||||| | | || | ||||||||||||||| || || || || ||||| | Sbjct 31287987 TTCCACCTCTTAATCTAAGCACCAGATGAAGGGTAGATTCCTTCTGGATGTTATAATCAG 31288046 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||||| |||| || | || || |||||||| || | | ||| ||||| || | Sbjct 31288047 CTAGGGTTCTTCCATCCTCGAGCTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAG 31288106 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || ||||| ||||| || || || ||| | || | || ||||| | ||| | Sbjct 31288107 GGATACCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTATCAGATGATTCAA 31288166 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 | ||||| |||| ||||| ||||| || || || ||||||||||||||| Sbjct 31288167 CCTCAAGGGTGATTGTTTTTCCGGTCAATGTCTTCACAAATATCTGCATG 31288216 Score = 134 bits (148), Expect = 1e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| | ||| |||||||||||||| || ||||||||||| || | ||| | | Sbjct 31259581 ACGAAGAACAAGATGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAGAGTACGACC 31259640 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||| ||||| || ||||| || | | ||| ||||| || ||||| || || || Sbjct 31259641 ATCCTCCAACTGCTTGCCAGCAAAAATAAGCCTCTGCTGATCTGGGGGAATACCCTCCTT 31259700 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||| || ||| ||| ||| | || | ||| ||||| ||||||| || | || | Sbjct 31259701 ATCTTGTATCTTTGCTTTCACATTATCAATAGTATCAGAGCTTTCCACCTCCAAGGTAAT 31259760 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || || | || || |||||||| |||||| Sbjct 31259761 AGTCTTCCCAGTAAGTGTCTTCACAAATATTTGCATG 31259797 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | ||| | || | ||||||||||| ||||| || || ||||||||||| Sbjct 35109091 CCTCCCCTCAGACGAAGGACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCGGCC 35109150 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||||| || ||||| ||||| | ||| ||||| || || Sbjct 35109151 AAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCAGGTGGG 35109210 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || || ||||| || |||||| || ||| | || | ||||| || ||||||| Sbjct 35109211 ATTCCCTCCTTATCCTGTATTTTTGCCTTAACATTATCAATGGTGTCTGAGCTTTCCACC 35109270 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || | || | || || || || ||||| || ||||| ||||||||| Sbjct 35109271 TCCAATGTAATGGTCTTTCCTGTCAAAGTCTTCACAAAGATCTGCATG 35109318 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| ||||| || ||||||||||| || ||||| ||||| || | ||| | | |||| Sbjct 31287092 AAAACCAAATGCAGAGTAGATTCTTTCTGGATATTATAATCAGCCAGAGTACGGCCATCT 31287151 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 ||||| ||||| || || || || | | ||| || || || |||||||| ||||| || Sbjct 31287152 TCCAACTGCTTGCCCGCGAAAATTAGCCTCTGCTGGTCTGGAGGAATGCCCTCTTTGTCC 31287211 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 ||||| ||| ||| || | || | || ||||| |||| || || | ||| | || Sbjct 31287212 TGAATCTTTGCTTTCACGTTGTCAATTGTATCAGAACTTTCAACCTCCAAAGTTATTGTC 31287271 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | ||| || ||||| |||||||| Sbjct 31287272 TTTCCGGTAAGAGTCTTCACAAAAATCTGCAT 31287303 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| ||||| | ||||| ||||| || || || || ||||| || || | || || | Sbjct 36295454 ACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCC 36295395 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||||||||| || ||||| ||||| | ||| ||||| || || || || || || Sbjct 36295394 ATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCCTT 36295335 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || |||||| || ||| | || | |||||| || ||||||| || | |||| Sbjct 36295334 GTCCTGGATTTTTGCCTTGACATTATCGATAGTGTCTGAACTTTCCACCTCTAAGGTGAT 36295275 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || || || ||||| |||||||| Sbjct 36295274 GGTCTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 36295239 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||||||||| || || || || ||||| | Sbjct 31260480 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAG 31260539 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | ||||| |||| || | ||| || || ||||| || | | ||| ||||| || | Sbjct 31260540 CTAGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCAGGAG 31260599 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || ||||| |||||||| || || ||| | || | || || || | ||||| Sbjct 31260600 GGATTCCCTCTTTGTCTTGAATCTTGGCCTTGACATTATCAATTGTATCTGATGATTCCA 31260659 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | ||||| |||| ||||| || || || ||||| || || || ||||| Sbjct 31260660 CCTCAAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATTTGCAT 31260708 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||| || || ||||| || ||||||||| Sbjct 31306224 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCGC 31306283 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | || | | || |||||||||||||| || || || | | ||||||||||| | Sbjct 31306284 CAAGTGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTTTGTTGATCGGGAG 31306343 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || || || |||||||| || ||| ||| | || | ||| || || | || | Sbjct 31306344 GGATACCCTCCTTGTCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAA 31306403 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | ||| | || || || || ||||| || |||||||||||||| Sbjct 31306404 CCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTAACAAATATCTGCAT 31306452 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||||||||| || || || || ||||| | Sbjct 31306452 TTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAG 31306511 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | |||| |||| || | || ||||||||||| || | | ||| ||||| || | Sbjct 31306512 CTAGGATTCTTCCATCCTCGAGCTGTTTACCTGCAAAGATAAGCCTCTGCTGATCAGGAG 31306571 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || ||||| ||||| || || || ||| | || | || || || | || | Sbjct 31306572 GGATACCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTATCGGAACTCTCTA 31306631 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | |||||||||| ||||| || || || ||||| ||||| |||||||| Sbjct 31306632 CCTCAAGAGTGATGGTTTTTCCTGTCAATGTTTTCACAAAGATCTGCAT 31306680 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| ||||| ||||| ||||| || || ||||| || | || | |||| ||| Sbjct 35101820 ACCAAATGGAGGGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGCCCATCCTCC 35101879 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 || ||||| || ||||| |||| |||||| || || || || || ||||| || |||||| Sbjct 35101880 AACTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGA 35101939 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 |||||| || ||| | |||| || || || | || ||||| ||||||| || ||| Sbjct 35101940 ATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 35101999 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || || ||||| Sbjct 35102000 CCAGTGAGGGTCTTAACGAAGATTTGCAT 35102028 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| ||||| | ||||| ||||| || || || || ||||| || || | || || | Sbjct 35100482 ACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCC 35100541 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||||||||| || ||||| ||||| | ||| ||||| || || || ||||| || Sbjct 35100542 ATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTT 35100601 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || |||||| || ||| | || | ||||| || |||| || || | |||| Sbjct 35100602 GTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGAT 35100661 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || || || ||||| |||||||| Sbjct 35100662 GGTCTTACCGGTCAACGTCTTCACAAAGATCTGCAT 35100697 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| ||||| | ||||| ||||| || || || || ||||| || || | || || | Sbjct 35108874 ACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCC 35108933 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||||||||| || ||||| ||||| | ||| ||||| || || || ||||| || Sbjct 35108934 ATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTT 35108993 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || |||||| || ||| | || | ||||| || |||| || || | |||| Sbjct 35108994 GTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGAT 35109053 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || || || ||||| |||||||| Sbjct 35109054 GGTCTTACCGGTCAACGTCTTCACAAAGATCTGCAT 35109089 Score = 122 bits (134), Expect = 7e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| ||||| ||||| ||||| ||||| || || ||||| || | || || |||| Sbjct 31287320 AAAACCAAATGGAGGGTCGATTCCTTTTGAATGTTATAATCAGCAAGGGTCCTTCCATCT 31287379 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | |||||||| ||||| || | | ||| |||||||| || || || || |||||| Sbjct 31287380 TCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCGGGAGGGATACCCTCCTTATCT 31287439 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 ||||| || ||| ||| | || | ||| || || | || || || | ||| | ||| Sbjct 31287440 TGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTAATAGTT 31287499 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||| | || |||||||| || ||||| Sbjct 31287500 TTTCCGGTAAGGGTCTTTACAAAAATTTGCAT 31287531 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 ||||| ||||| || || || || || || || || |||||||| | || || |||| Sbjct 31260041 AAAACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAATCGGCAAGTGTCCTTCCATCT 31260100 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || | |||||||| ||||| || | | ||||||||| || || || || || |||||| Sbjct 31260101 TCAAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCAGGAGGGATACCCTCCTTATCT 31260160 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 ||||| || ||| ||| | || | ||| || || | || || || | ||| | ||| Sbjct 31260161 TGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTAATAGTT 31260220 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||||||| || ||||| || ||||| Sbjct 31260221 TTTCCAGTTAAAGTCTTAACAAAAATTTGCAT 31260252 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||| || | | || ||||||||||||||||| || || || || ||||| | Sbjct 31260252 TTCCGCCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCAG 31260311 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | | || || |||| || | ||| || |||||||| || | | ||| ||||| || | Sbjct 31260312 CTAGGGTCCTTCCATCTTCTAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGAG 31260371 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | || || ||||| || || || || || ||| | || | || || || | ||| | Sbjct 31260372 GGATACCCTCTTTGTCCTGTATCTTGGCCTTGACATTATCAATGGTATCCGAGGATTCAA 31260431 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 | || | |||| ||||| || || ||||| ||||| ||||||||||| Sbjct 31260432 CCTCTAAGGTGATGGTTTTTCCAGTCAAAGTCTTTACGAATATCTGCAT 31260480 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101260 AACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTC 101319 ||| | ||| |||||||||||||| || ||||||||||| || | ||| | |||| || Sbjct 31286866 AACAAGATGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACCATCCTC 31286925 Query 101320 CAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTG 101379 ||| ||||| || ||||| || | | || || || || ||||| || || ||||| || Sbjct 31286926 CAACTGCTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGAATACCCTCCTTATCCTG 31286985 Query 101380 AATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTT 101439 || || ||| || | || | || ||||| ||||||| || | || | || || Sbjct 31286986 TATCTTCGCTTTCACGTTATCAATCGTATCAGAGCTTTCCACCTCCAAGGTAATAGTCTT 31287045 Query 101440 GCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| | ||| || |||||||| ||||| Sbjct 31287046 CCCGGTAAGAGTCTTCACAAATATTTGCAT 31287075 Score = 98.7 bits (108), Expect = 8e-16 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || | ||| | || | ||||||||||| ||||| || || ||||||||||| Sbjct 35100699 CCTCCCCTCAGACGAAGGACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCGGCC 35100758 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||||| || ||||| ||||| | ||| ||||| || || Sbjct 35100759 AAAGTCCGGCCATCTTCAAGCTGCTTCCCAGCAAAGATCAACCTCTGCTGATCAGGTGGG 35100818 Query 101363 ATGCCTTCTTTATCTTGAATTTTT 101386 || || || ||||| || |||||| Sbjct 35100819 ATTCCCTCCTTATCCTGTATTTTT 35100842 >seq8 Length=45569985 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || ||||| | || | |||||| || |||||||| || || || ||||| || Sbjct 6168623 CCTCCCCTCAAACGAAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCTGCC 6168564 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| || | ||||| || ||||| ||||| | || || || || ||| Sbjct 6168563 AAGGTTCTGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGA 6168504 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 |||||||| || || ||||| || |||||| | || | ||||| || | ||||| Sbjct 6168503 ATGCCTTCCTTGTCCTGAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCCACC 6168444 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | |||||| || |||| || || ||||| |||||||| Sbjct 6168443 TCCAAAGTAATCGTTTTTCCAGTTAGGGTCTTAACAAAAATCTGCAT 6168397 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| || ||||| | || | ||||||||||| ||||| || || |||||||| || Sbjct 34999912 CCTCCCCTCAAACGAAGGACAAGGTGAAGGGTAGACTCTTTCTGAATGTTGTAATCAGCA 34999971 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | ||||| || ||||| ||||| || || || || || ||| Sbjct 34999972 AGAGTCCGGCCATCTTCGAGCTGCTTTCCAGCAAAAATCAATCGTTGCTGGTCTGGGGGA 35000031 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || |||||||| || ||| | || | |||||| || | || || Sbjct 35000032 ATGCCCTCCTTGTCCTGAATTTTAGCCTTCACATTGTCAATAGTGTCTGAGCTCTCTACC 35000091 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || | ||| | |||||||| || | ||| || || || |||||||| Sbjct 35000092 TCCAAAGTAATTGTTTTGCCAGTAAGAGTCTTCACGAAAATCTGCAT 35000138 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| ||||| | ||||| ||||| || || || || ||||| || || | || || | Sbjct 6169296 ACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCC 6169237 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| ||||||||||| || ||||| ||||| | ||| ||||| || || || ||||| || Sbjct 6169236 ATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCTTCCTT 6169177 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || |||||| || ||| | || | ||||| || |||| || || | |||| Sbjct 6169176 GTCCTGGATTTTTGCCTTCACATTATCAATTGTGTCTGAACTTTCTACCTCTAAGGTGAT 6169117 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || ||||| || || |||||||| |||||||| Sbjct 6169116 GGTCTTACCGGTCAACGTCTTTACAAAGATCTGCAT 6169081 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||||||||| || ||||| || || ||||| || | || | |||| ||| Sbjct 35000614 ACCAAATGAAGGGTAGACTCCTTTTGGATGTTATAATCCGCAAGGGTACGCCCATCCTCC 35000673 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||| || || ||||| || | |||||| ||||| || || || ||||| || |||||| Sbjct 35000674 AGTTGTTTGCCAGCAAAAATGAGACGCTGCTGATCAGGTGGGATCCCTTCCTTGTCTTGA 35000733 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || || || ||| | |||| || || || | || ||||| ||||||| || ||| Sbjct 35000734 ATCTTGGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 35000793 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || || ||||| Sbjct 35000794 CCAGTGAGGGTCTTAACGAAAATTTGCAT 35000822 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || ||||| || || ||||| ||||| || || ||||| || | || | |||| ||| Sbjct 6167921 ACCAAATGGAGAGTGGATTCCTTTTGGATGTTATAATCAGCAAGGGTACGCCCATCCTCC 6167862 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | ||||| || ||||| |||| ||||| || || || || || ||||| || |||||| Sbjct 6167861 AGCTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGA 6167802 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 |||||| || ||| | |||| || || || | || ||||| ||||||| || ||| Sbjct 6167801 ATTTTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTG 6167742 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | || || || || || ||||| Sbjct 6167741 CCAGTGAGGGTCTTAACGAAGATTTGCAT 6167713 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||| | || | |||||||||||| || || || || |||||||| || Sbjct 33775198 CCACCACGTAGACGGAGGACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCA 33775139 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | | | || || | ||||| || || || ||||| | ||| || || | ||| Sbjct 33775138 AGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCAGGGGA 33775079 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| ||||| || || || ||| || | || | ||||| || |||| || Sbjct 33775078 ATTCCTTCCTTATCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAGCTTTCGACC 33775019 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 ||||| ||| || |||||||| | || || || || ||||||||| Sbjct 33775018 TCAAGGGTGGTGGTCTTGCCGGTGAGGGTCTTAACGAAGATCTGCATG 33774971 >seq7 Length=49172423 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314 || ||||| | ||||| ||||| || || || || ||||| || || | || || || Sbjct 47990292 CGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCA 47990233 Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374 || ||||||||||| || ||||| ||||| | ||| ||||| || || || || || || Sbjct 47990232 TCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTG 47990173 Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434 || || ||||| |||||| | || | ||||| || | || || || | ||| | Sbjct 47990172 TCCTGTATTTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCTACCTCCAAAGTAATT 47990113 Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | ||||||||||| |||||||| Sbjct 47990112 GTCTTTCCTGTAAGGGTTTTTACAAAAATCTGCAT 47990078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396267837570759