Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq4 159 3e-34 seq979 132 4e-26 seq8 107 1e-18 seq1 98.7 8e-16 seq6 89.7 4e-13 seq7 82.4 6e-11 >seq4 Length=56582383 Score = 159 bits (176), Expect = 3e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||||||| |||||||| || ||| ||| |||||||| |||||||||| || | || Sbjct 31287770 AGCCGCAAAACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCAGCGAGCGTGCGC 31287829 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||| ||||||||||| || || || | ||| ||||| | || | |||||| Sbjct 31287830 CCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTCTGCTGATCTGGAGGGATACCCTCC 31287889 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| ||| ||| | | | || ||||| ||||||||||| ||| Sbjct 31287890 TTATCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCCACCTCCAAAGTA 31287949 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| |||||||| ||||||||||||||||| Sbjct 31287950 ATAGTCTTTCCAGTCAAAGTCTTTACAAAAATCTGCAT 31287987 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 48557 CACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTC 48616 ||||||||| || ||| ||| |||||||| |||||||| || | || |||| || Sbjct 31306243 CACCAAATGAAGGGTGGACTCCTTTTGAATGTTGTAATCGCCAAGTGTGCGCCCGTCTTC 31306302 Query 48617 CAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCT 48676 ||| ||||||||||| || || || | |||||||| | || | ||||||||||| Sbjct 31306303 CAATTGCTTACCGGCGAAGATAAGCCTTTGTTGATCGGGAGGGATACCCTCCTTGTCTTG 31306362 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| ||| ||| | | | || ||||| ||| ||||||| ||||| || || Sbjct 31306363 AATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTAATAGTCTT 31306422 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| |||||||| || ||||| |||||||| Sbjct 31306423 TCCAGTCAAAGTCTTAACAAATATCTGCAT 31306452 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||| ||| |||||||| || || || |||||||| || ||||||| || | | Sbjct 31287314 AGCCTCAAAACCAAATGGAGGGTCGATTCCTTTTGAATGTTATAATCAGCAAGGGTCCTT 31287373 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||||||| ||||| || || | ||| ||||| | || | |||||| Sbjct 31287374 CCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTCTGCTGATCGGGAGGGATACCCTCC 31287433 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| ||| ||| | | | || ||||| ||| ||||||| ||| Sbjct 31287434 TTATCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTA 31287493 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || | || ||||||||||| ||||| Sbjct 31287494 ATAGTTTTTCCGGTAAGGGTCTTTACAAAAATTTGCAT 31287531 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||||||| |||||||| || ||| || ||||| ||||| ||||||| || | | Sbjct 31287542 AGCCGCAAAACCAAATGCAGAGTGGATTCCTTTTGGATATTATAATCAGCAAGGGTCCTT 31287601 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | || || || ||||| || |||| ||| ||||| | || | ||| ||| Sbjct 31287602 CCATCTTCAAGTTGTTTCCCTGCAAAGATAAGTCTCTGCTGATCAGGAGGGATGCCTTCC 31287661 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || |||||| ||| ||| | | | || ||||| ||| ||||||| ||| Sbjct 31287662 TTATCCTGAATCTTAGCTTTCACATTATCAATAGTATCTGAACTCTCAACCTCCAAAGTA 31287721 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || | || ||||||||||| ||||| Sbjct 31287722 ATAGTTTTTCCGGTAAGGGTCTTTACAAAAATTTGCAT 31287759 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || |||||| || || |||||||||| ||| ||| Sbjct 36294544 AGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTG 36294485 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || | ||| ||||| | ||||| ||||| Sbjct 36294484 CCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGATCTGGGGGAATACCCTCT 36294425 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| |||||| | | | ||||| ||| ||||||| ||| Sbjct 36294424 TTGTCCTGAATCTTTGCCTTTACATTGTCAATCGTATCTGAGCTCTCTACCTCCAAAGTA 36294365 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || ||||||||||||||||| Sbjct 36294364 ATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 36294327 Score = 105 bits (116), Expect = 5e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 ||||| |||||||||||||| | ||| | ||| | || ||||||||||| || ||||| Sbjct 31259606 TCTTTCTGAATATTGTAATCTGCCAGAGTACGACCATCCTCCAACTGCTTGCCAGCAAAA 31259665 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || | ||| ||||| | ||||| |||||||| || |||||| ||| ||| | Sbjct 31259666 ATAAGCCTCTGCTGATCTGGGGGAATACCCTCCTTATCTTGTATCTTTGCTTTCACATTA 31259725 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | || || || |||||||||| ||||| || || || || | || || ||| Sbjct 31259726 TCAATAGTATCAGAGCTTTCCACCTCCAAGGTAATAGTCTTCCCAGTAAGTGTCTTCACA 31259785 Query 48756 AAAATCTGCAT 48766 || || ||||| Sbjct 31259786 AATATTTGCAT 31259796 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || |||||| || || |||||||||| ||| ||| Sbjct 35109556 AGACGCAAGACAAGGTGAAGAGTCGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTG 35109615 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || | ||| || || | ||||| ||||||| Sbjct 35109616 CCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCC 35109675 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | | || || ||| ||||||| ||| Sbjct 35109676 TTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTA 35109735 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || ||||||||||||||||| Sbjct 35109736 ATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35109773 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||| ||| |||||||| || || ||||| || ||||| ||||||| ||| | || Sbjct 31287086 AGCCTCAAAACCAAATGCAGAGTAGATTCTTTCTGGATATTATAATCAGCCAGAGTACGG 31287145 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || || || || || | ||| || || | |||| |||||| Sbjct 31287146 CCATCTTCCAACTGCTTGCCCGCGAAAATTAGCCTCTGCTGGTCTGGAGGAATGCCCTCT 31287205 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| ||| || | | | || || || ||||||| || Sbjct 31287206 TTGTCCTGAATCTTTGCTTTCACGTTGTCAATTGTATCAGAACTTTCAACCTCCAAAGTT 31287265 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | ||| || |||||||||||||| Sbjct 31287266 ATTGTCTTTCCGGTAAGAGTCTTCACAAAAATCTGCAT 31287303 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || |||||| || || |||||||||| ||| ||| Sbjct 35109784 AGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTG 35109843 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || ||||| || || | ||| || || | ||||| ||||||| Sbjct 35109844 CCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCC 35109903 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | | || || ||| ||||||| ||| Sbjct 35109904 TTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTA 35109963 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || ||||||||||||||||| Sbjct 35109964 ATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110001 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || |||||| || || |||||||||| ||| ||| Sbjct 35110012 AGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTG 35110071 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || ||||| || || | ||| || || | ||||| ||||||| Sbjct 35110072 CCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCC 35110131 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | | || || ||| ||||||| ||| Sbjct 35110132 TTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTA 35110191 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || ||||||||||||||||| Sbjct 35110192 ATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110229 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || |||||| || || |||||||||| ||| ||| Sbjct 35110240 AGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTG 35110299 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || ||||| || || | ||| || || | ||||| ||||||| Sbjct 35110300 CCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCC 35110359 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | | || || ||| ||||||| ||| Sbjct 35110360 TTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTA 35110419 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || ||||||||||||||||| Sbjct 35110420 ATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110457 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || |||||| || || |||||||||| ||| ||| Sbjct 35110468 AGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTG 35110527 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || ||||| || || | ||| || || | ||||| ||||||| Sbjct 35110528 CCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCC 35110587 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | | || || ||| ||||||| ||| Sbjct 35110588 TTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCAACCTCCAAAGTA 35110647 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || ||||||||||||||||| Sbjct 35110648 ATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110685 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || |||||| || || |||||||||| ||| ||| Sbjct 35110696 AGACGCAAGACAAGGTGAAGAGTTGACTCTTTCTGGATGTTGTAATCAGCAAGAGTTCTG 35110755 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || ||||| || || | ||| || || | ||||| ||||||| Sbjct 35110756 CCATCTTCAAGCTGTTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGAATGCCCTCC 35110815 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| |||||| | | | || || ||| ||||||| ||| Sbjct 35110816 TTGTCCTGAATCTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCTACCTCCAAAGTA 35110875 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || ||||||||||||||||| Sbjct 35110876 ATTGTCTTTCCTGTAAGGGTCTTTACAAAAATCTGCAT 35110913 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||||||| || | ||| || || |||||| || ||||| ||||||| ||| ||||| Sbjct 36294772 AGCCGCAAGACAAGATGAAGAGTCGACTCTTTCTGGATATTATAATCAGCCAGAGTTCGA 36294713 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| || | ||||| || ||||| |||| | || || || | ||||| |||||| Sbjct 36294712 CCGTCTTCAAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGAATACCCTCC 36294653 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || ||| ||||||| ||| Sbjct 36294652 TTGTCTTGTATCTTGGCCTTCACATTGTCAATTGTGTCCGAGCTCTCTACCTCCAAAGTA 36294593 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || || | ||| || |||||||||||||| Sbjct 36294592 ATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 36294555 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||| ||| |||||||| | || || || || ||||| ||||| | | | | ||| Sbjct 31259807 AGCCTCAAAACCAAATGCAAAGTAGATTCCTTCTGGATATTATAATCGGCCAAAGTACGA 31259866 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||||||||| || ||||| || |||| ||| || || | |||| |||||| Sbjct 31259867 CCATCCTCCAACTGCTTTCCAGCAAAAATTAGTCTCTGCTGGTCAGGAGGAATGCCCTCT 31259926 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 || || ||| ||| || ||| | | | | || || ||| ||||||| || Sbjct 31259927 TTATCCTGAATTTTTGCCTTCACATTATCAATTGTATCAGAACTCTCAACCTCCAAAGTT 31259986 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || |||||||||||||| Sbjct 31259987 ATGGTCTTTCCAGTAAGGGTCTTAACAAAAATCTGCAT 31260024 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || ||| || ||||| ||||| |||| || | | Sbjct 36295456 AGACGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTT 36295397 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| ||||| || ||||| |||| | ||| ||||| | ||| | |||||| Sbjct 36295396 CCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGGGGGATTCCCTCC 36295337 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || ||| || ||| | | | || ||||| |||||||| | || Sbjct 36295336 TTGTCCTGGATTTTTGCCTTGACATTATCGATAGTGTCTGAACTTTCCACCTCTAAGGTG 36295277 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || ||||| |||||||| Sbjct 36295276 ATGGTCTTTCCGGTCAATGTCTTCACAAAGATCTGCAT 36295239 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || || | || | ||| || || || || || || || ||||| || Sbjct 36295010 GCCTCCCCTCAGACGAAGGACAAGATGAAGGGTTGATTCCTTCTGGATGTTATAATCTGA 36294951 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | | | | || || | |||||| || ||||| |||| | || || || | || Sbjct 36294950 CAAGGTCCTTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGG 36294891 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||||||||| |||||| |||||| | | | ||||| ||| || Sbjct 36294890 AATGCCCTCCTTGTCCAGAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCAAC 36294831 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| |||||||||||||| || | || || |||||||||||||| Sbjct 36294830 CTCCAAAGTAATCGTTTTTCCAGTTAGGGTCTTAACAAAAATCTGCAT 36294783 >seq979 Length=3763 Score = 132 bits (146), Expect = 4e-26 Identities = 169/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 27984 TTGGCCAGTTGATGGCCATCAAACGACACCATCCCCACCTATCCATACTGCCCTCGATTG 28043 |||||||| |||||||| || | | ||||| |||| || ||||| ||||| | Sbjct 1388 TTGGCCAGATGATGGCCGCGAAGAAGCGCAATCCCGACCTCAAGATCCTGCCGTCGATCG 1329 Query 28044 GTGGGTGGACTCTGAGCGATCCATTCTTTTTTATGCACGACCCGGCCAAGCGTGCCGTGT 28103 | || ||||| ||| |||||| ||||| ||||||||||||||||||| |||| Sbjct 1328 GCGGCTGGACGCTGTCCGATCCGTTCTTCCAGCTGCACGACCCGGCCAAGCGCAAGGTGT 1269 Query 28104 TTGTAGAGTCTGTGCGCGAATTT-CTGCAAACGTGGAAGTTCTTTGACGGAGTCGATTTG 28162 | || || || | || | | || |||| || ||||||||||| ||||| ||||| | Sbjct 1268 TCGTCGATTC-GACCGAGCAGTTGCTGCGCACCTGGAAGTTCTTCGACGGTGTCGACATC 1210 Query 28163 GACTGGGAGTTTCCGGGTGGAAAGGGAGCCAACCCCGCGATCGGTAACCC 28212 |||||||| || ||||| || ||||| || ||| ||||||||| || || Sbjct 1209 GACTGGGAATTCCCGGGCGGCAAGGGCGCGAACGGCGCGATCGGCAATCC 1160 >seq8 Length=45569985 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 |||||| ||||| |||||||||| ||| | || | || || | |||||| || ||||| Sbjct 34999947 CTCTTTCTGAATGTTGTAATCAGCAAGAGTCCGGCCATCTTCGAGCTGCTTTCCAGCAAA 35000006 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| ||| || || || | ||||| |||||||||||| ||| || || ||| Sbjct 35000007 AATCAATCGTTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATTTTAGCCTTCACATT 35000066 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | || ||||| ||| ||||||| ||||| ||||| || || | ||| || || Sbjct 35000067 GTCAATAGTGTCTGAGCTCTCTACCTCCAAAGTAATTGTTTTGCCAGTAAGAGTCTTCAC 35000126 Query 48755 AAAAATCTGCAT 48766 ||||||||||| Sbjct 35000127 GAAAATCTGCAT 35000138 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| | || | || | ||| || ||| ||||| || || || ||||| | Sbjct 6168624 GCCTCCCCTCAAACGAAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTATAATCTGC 6168565 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 | ||| | || || | |||||| || ||||| |||| | || || || | ||| Sbjct 6168564 CAAGGTTCTGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGG 6168505 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || ||| |||||||| |||||| |||||| | | | ||||| |||||| Sbjct 6168504 AATGCCTTCCTTGTCCTGAATCTTAGCCTTTACATTGTCAATTGTGTCTGAGCTCTCCAC 6168445 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||||| |||||||||||||| || | || || |||||||||||||| Sbjct 6168444 CTCCAAAGTAATCGTTTTTCCAGTTAGGGTCTTAACAAAAATCTGCAT 6168397 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | ||| || || |||||| || || || ||||||| |||| ||||| Sbjct 6168386 AGTCGCAAGACAAGATGAAGAGTCGACTCTTTCTGGATGTTATAATCAGCTAGAGTTCGA 6168327 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| |||| | || || || | ||| | |||||| Sbjct 6168326 CCATCTTCAAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGGGGATACCCTCC 6168267 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || ||| ||||||| ||| Sbjct 6168266 TTGTCTTGTATCTTGGCCTTCACATTGTCAATTGTGTCCGAGCTCTCTACCTCCAAAGTA 6168207 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | || || |||||||||||||| Sbjct 6168206 ATAGTCTTTCCTGTAAGGGTCTTAACAAAAATCTGCAT 6168169 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48555 AACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCG 48614 ||||| | || || ||||| || || ||||| |||||||||| ||| ||| ||||| Sbjct 33775411 AACACAAGGTGAAGAGTGCTTTCCTTCTGAATGTTGTAATCAGCTAGGGTTCTTTCGTCT 33775352 Query 48615 TCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 ||||||||||| ||||| || || || | ||| || || || ||| || |||||||| Sbjct 33775351 TCCAACTGCTTTCCGGCGAAGATAAGCCTCTGCTGGTCTATGTGAATTCCTTCCTTGTC 33775293 >seq1 Length=52991155 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| ||||| |||||||| || ||||| ||||| | ||| ||| | || |||||||| Sbjct 28610795 ATGAAGCGTACTCTCTTTCTGGATATTATAATCCGCAAGAGTTCTTCCATCTTCCAACTG 28610736 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| |||| ||| || ||||||| |||| ||| |||||||| |||||| Sbjct 28610735 CTTCCCTGCAAAGATCAATCGTTGCTGATCCGGTGGAATGCCTTCCTTGTCTTGAATCTT 28610676 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 || || | | | || || | || || |||| || || ||||| || || Sbjct 28610675 CGCCTTCACGTTGTCGATTGTGTCAGAAGATTCAACTTCCAGGGTTATGGTTTTCCCTGT 28610616 Query 48743 CAAAGTTTTTACAAAAATCTGCAT 48766 | ||||| ||||| || ||||| Sbjct 28610615 TAGGGTTTTGACAAAGATTTGCAT 28610592 >seq6 Length=35275713 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || ||||||||| || |||||||| | ||| ||| Sbjct 24039529 AGGCGCAAGACAAGGTGAAGAGTTGACTCTTTTTGGATGTTGTAATCGGCAAGAGTTCTG 24039470 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || | ||| || || | ||| | |||||| Sbjct 24039469 CCATCTTCAAGCTGCTTTCCAGCAAAAATGAGCCTCTGCTGGTCTGGGGGGATACCCTCC 24039410 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| ||| ||| | | | || || || ||||||||| | || Sbjct 24039409 TTGTCCTGAATCTTGGCTTTGACATTATCAATAGTATCAGAGCTCTCCACCTCAAGGGTG 24039350 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || || ||||| || | ||| || || || || |||||| Sbjct 24039349 ATTGTCTTTCCAGTGAGAGTCTTGACGAAGATTTGCATC 24039311 >seq7 Length=49172423 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| || | || || || ||| || ||||| ||||| |||| || | | Sbjct 47990295 AGGCGCAAAACAAGGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTT 47990236 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| ||||| || ||||| |||| | ||| ||||| | || | |||||| Sbjct 47990235 CCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCC 47990176 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || |||||| | | | || || ||| ||||||| ||| Sbjct 47990175 TTGTCCTGTATTTTAGCCTTTACATTGTCAATCGTGTCCGAGCTCTCTACCTCCAAAGTA 47990116 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | |||||||||||||||||||| Sbjct 47990115 ATTGTCTTTCCTGTAAGGGTTTTTACAAAAATCTGCAT 47990078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380927446465401