Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq7 100 7e-16 >seq7 Length=49172423 Score = 100 bits (110), Expect = 7e-16 Identities = 256/377 (68%), Gaps = 16/377 (4%) Strand=Plus/Plus Query 150404 GGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAAT 150463 ||||| |||||||||||||||||| | ||||| || | || | | || | || Sbjct 10044188 GGTGAGCCAGGTGTTGGTAAAACAGCTGTTGTTGAAGGGCTGGCTAAGAGAATAGTTAGA 10044247 Query 150464 GGTGATGTTCC-AG-ATTCTATGAAAGATGTTGAAATTCTTT-CTTTGAATATGGGTGCA 150520 || |||||||| || | ||| || |||||| | || ||| ||||| ||||||| || Sbjct 10044248 GGAGATGTTCCTAGCAATCT-TGCT-GATGTT-AGGTTATTTGCTTTGGATATGGGAGCG 10044304 Query 150521 TTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACG--TGTAGACAATTTGCTAC 150578 || ||||||||| ||||| | || |||| ||| || | || || || ||| | Sbjct 10044305 TTAGTCGCTGGTACTCAGTATAGGGGACAATTTGAACAAAGGTTGAAGGCAGTTT--TGA 10044362 Query 150579 AAGAACTAAAAGAACGCGATG---ATGTTATTCTGTTCATCGATGAAATCCATACTATTA 150635 ||||| | |||| || | | |||||| | ||||| |||||||| ||| | || Sbjct 10044363 AAGAAGTGGAAGATGCTGAAGGGAAGGTTATTGTTTTCATTGATGAAATTCATCTTGTTC 10044422 Query 150636 TGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTC 150695 | ||||| ||| | || | || || ||||| ||| | || |||||| | Sbjct 10044423 TCGGTGCCGGTC--AATGTCAA-GGATCAATGGATGCTGCTAATCTTTTGAAACCTATGC 10044479 Query 150696 TATCTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACA 150755 | |||| || || || | ||||||||||||||| ||||||||| | ||| | Sbjct 10044480 TTGCTCGTGGCCAACTTAGATGCATCGGTGCAACAACACTTGATGAATATAGAAAATATG 10044539 Query 150756 TTGAAAAAGATGCAGCA 150772 ||||||| ||||||||| Sbjct 10044540 TTGAAAAGGATGCAGCA 10044556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147558243441126