Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq1013 331 4e-86 >seq1013 Length=3469 Score = 331 bits (366), Expect = 4e-86 Identities = 270/328 (82%), Gaps = 0/328 (0%) Strand=Plus/Minus Query 9694 GCATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCC 9753 |||||||||| || |||||||| |||||||||||||||||||| || || |||||| | Sbjct 335 GCATGGCATCAGTGAACAAAGTGATCCTCGTCGGCAATCTCGGCGCAGATCCGGAAGTGC 276 Query 9754 GCTATCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACA 9813 | |||| |||||||||||||| || | ||||| || ||||||||||||||||| |||| Sbjct 275 GACATCTGCCGAGCGGCGACGCGGTCGCGAACATTCGTCTCGCGACGACCGATCGCTACA 216 Query 9814 AGGACAAAGCCAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTTCG 9873 |||||||||| |||||||||||||| | ||||||||||| || ||||||||||| | Sbjct 215 AGGACAAAGCATCAGGCGACTTCAAAGAGATCACCGAGTGGCATCGTGTCGCCTTCTTTG 156 Query 9874 GCCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCGAGG 9933 ||||||| || ||||||||| | || | ||| ||||| | || ||||||||||| | Sbjct 155 GCCGCCTTGCGGAGATCGTCAGCCAGTATCTGAAAAAGGGATCTTCCGTCTACATCGAAG 96 Query 9934 GGCGCATCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGA 9993 | |||||| |||||||| ||||||| ||| |||||||||||||||| ||||||||| Sbjct 95 GCCGCATCCGCACGCGGAAATGGCAGGGGCAAGACGGCCAGGATCGCTACTCGACCGAGA 36 Query 9994 TCGTCGCCGACAAGATGCAGATGCTCGG 10021 | ||||| ||| | |||||||||||||| Sbjct 35 TTGTCGCTGACCAAATGCAGATGCTCGG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201316233961491