Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_020489.1 Length=40489 Score E Sequences producing significant alignments: (Bits) Value seq813 131 4e-26 >seq813 Length=5840 Score = 131 bits (144), Expect = 4e-26 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 26864 AGTCGATGCACTCGGCGGCAGCGCGCCACGGCTTGAGCCTGCCCTTGCGGACCGCCGGGC 26923 |||||||||| || ||||||| ||| | || |||| |||| | |||| | | Sbjct 2795 AGTCGATGCATTCAGCGGCAGTGCGGTATGGTGCGAGCATGCCAGCGAGGACTTCACGCG 2854 Query 26924 TTTTCGGATCTCCATGCGTCGGTGCAGGCCAGACGATCCGGCGGCCATCGCAGCGCGCCA 26983 |||| || || || ||||| | || |||||||| | || |||| ||||||| Sbjct 2855 ACGTCGGCTCGCCGTGAGTCGGCTCGGGAAAGACGATCGGCAATCCGTCGCGCCGCGCCA 2914 Query 26984 CCAGAAACAGGCGCTTGCGGATCGTAGGGGCGCCGAAGTCGCAGGCGCGCAGCTCGCGCC 27043 | || |||| ||||||||||||||| ||||||||| |||||| || ||||||||||||| Sbjct 2915 CAAGGAACAAGCGCTTGCGGATCGTCGGGGCGCCGTTGTCGCAAGCACGCAGCTCGCGCC 2974 Query 27044 ATTCGACGCGATAGCCGCGCTCGCGCAGCTGGCGCAC 27080 | ||||| |||||| ||| |||| ||| ||||| Sbjct 2975 AGTCGACCGTGTAGCCGTGCTGACGCAACTGACGCAC 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129439838279194