Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq2187 560 3e-155 seq4 560 3e-155 seq7 556 4e-154 seq10 547 2e-151 seq1 542 9e-150 seq2 170 6e-38 seq3 154 4e-33 >seq2187 Length=124033 Score = 560 bits (620), Expect = 3e-155 Identities = 719/986 (73%), Gaps = 4/986 (0%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct 123522 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 123463 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | ||| | | |||||||| || | || | ||| | | || | ||| Sbjct 123462 AGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACGGA 123403 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 |||||| |||||||| ||||| | || |||||||||||| ||| || | | ||||| Sbjct 123402 TTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTAAA 123343 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | || ||||||||||| | ||||||||||| | | |||||| || Sbjct 123342 CCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAA 123283 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 |||||||| |||||||| | || ||||| || |||||||| || ||||||||||| || Sbjct 123282 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGT 123223 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 ||||| ||||| || ||| | || || | || ||| ||| || || ||||| || Sbjct 123222 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCT 123163 Query 18194 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 18253 || | ||||| || | |||||||||||| |||| | || |||||||| Sbjct 123162 GATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAATAC 123103 Query 18254 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATAC 18313 || || ||||| | ||| || || ||||||||||| ||||| || || || || ||||| Sbjct 123102 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATAC 123043 Query 18314 GAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 18373 | ||| || |||||||||||| || || |||||||||||||| || || || ||||| Sbjct 123042 AATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTG 122983 Query 18374 TCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCA 18431 |||| || || | | ||||| |||| || || ||||||| || || || ||||| ||| Sbjct 122982 ACCAATTGGGTAGATCAAGAAA-ACTGCAGTAG-CAGCTGCAACAGGAGCTGAATATGCA 122925 Query 18432 ACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAA 18491 ||| |||||| ||||||||||| || | | ||||||||||||| | || ||||||||| Sbjct 122924 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 122865 Query 18492 GCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAAC 18551 || | || | | ||||| | ||||| |||| ||| || || ||||| |||||| Sbjct 122864 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAAC 122805 Query 18552 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 18611 || || || | || |||||||||||| || ||||| ||||| | |||||| || || Sbjct 122804 CATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCCGAA 122745 Query 18612 GACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGC 18671 | || | || || || || || || |||||||| || |||| | ||| || |||||| Sbjct 122744 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 122685 Query 18672 TCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTA 18731 |||||||||||||| || || || |||||||| || | || || || | |||| | | | Sbjct 122684 TCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATACAGAA 122625 Query 18732 GCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTG 18791 | |||||| || | | ||||||||| | || |||||||| || | ||| || ||||| Sbjct 122624 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTT 122565 Query 18792 TTTGTACTCGTAACCCAGTCACATAA 18817 | || || || | ||||| ||| || Sbjct 122564 TCAGTGCTGGTTATCCAGTTACAGAA 122539 >seq4 Length=56582383 Score = 560 bits (620), Expect = 3e-155 Identities = 719/986 (73%), Gaps = 4/986 (0%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct 18305191 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 18305132 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | ||| | | |||||||| || | || | ||| | | || | ||| Sbjct 18305131 AGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACGGA 18305072 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 |||||| |||||||| ||||| | || |||||||||||| ||| || | | ||||| Sbjct 18305071 TTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTAAA 18305012 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | || ||||||||||| | ||||||||||| | | |||||| || Sbjct 18305011 CCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAA 18304952 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 |||||||| |||||||| | || ||||| || |||||||| || ||||||||||| || Sbjct 18304951 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGT 18304892 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 ||||| ||||| || ||| | || || | || ||| ||| || || ||||| || Sbjct 18304891 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCT 18304832 Query 18194 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 18253 || | ||||| || | |||||||||||| |||| | || |||||||| Sbjct 18304831 GATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAATAC 18304772 Query 18254 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATAC 18313 || || ||||| | ||| || || ||||||||||| ||||| || || || || ||||| Sbjct 18304771 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATAC 18304712 Query 18314 GAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 18373 | ||| || |||||||||||| || || |||||||||||||| || || || ||||| Sbjct 18304711 AATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTG 18304652 Query 18374 TCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCA 18431 |||| || || | | ||||| |||| || || ||||||| || || || ||||| ||| Sbjct 18304651 ACCAATTGGGTAGATCAAGAAA-ACTGCAGTAG-CAGCTGCAACAGGAGCTGAATATGCA 18304594 Query 18432 ACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAA 18491 ||| |||||| ||||||||||| || | | ||||||||||||| | || ||||||||| Sbjct 18304593 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 18304534 Query 18492 GCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAAC 18551 || | || | | ||||| | ||||| |||| ||| || || ||||| |||||| Sbjct 18304533 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAAC 18304474 Query 18552 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 18611 || || || | || |||||||||||| || ||||| ||||| | |||||| || || Sbjct 18304473 CATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCCGAA 18304414 Query 18612 GACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGC 18671 | || | || || || || || || |||||||| || |||| | ||| || |||||| Sbjct 18304413 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 18304354 Query 18672 TCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTA 18731 |||||||||||||| || || || |||||||| || | || || || | |||| | | | Sbjct 18304353 TCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATACAGAA 18304294 Query 18732 GCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTG 18791 | |||||| || | | ||||||||| | || |||||||| || | ||| || ||||| Sbjct 18304293 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTT 18304234 Query 18792 TTTGTACTCGTAACCCAGTCACATAA 18817 | || || || | ||||| ||| || Sbjct 18304233 TCAGTGCTGGTTATCCAGTTACAGAA 18304208 Score = 176 bits (194), Expect = 1e-39 Identities = 205/277 (74%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 18541 CGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGA 18600 |||| |||||||| || || | || |||||||||||| |||||||| ||||| | ||||| Sbjct 18030835 CGTTGTATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCGA 18030894 Query 18601 TTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTC 18660 | || ||| | || | || || || || || || |||||||| || |||| | || Sbjct 18030895 TAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATC 18030954 Query 18661 CTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCA 18720 | || |||||||||||||||||||| || || || |||||||| || | || || || | Sbjct 18030955 CAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAA 18031014 Query 18721 AAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGT 18780 |||| | | || |||||| || | | ||||||||| | || |||||||| || | || Sbjct 18031015 TAAATACGGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGT 18031074 Query 18781 AGAGGCGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 | || ||||| | || || || | ||||| ||| || Sbjct 18031075 AAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 18031111 Score = 116 bits (128), Expect = 1e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 18534 GGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGA 18593 || || ||||| ||| |||| || || | |||||||||||| || ||||| ||||| Sbjct 525530 GGACCGCCGTTGTATGACCATTCATCAACAAATGCAGCTTCCCATATCGGGTAAAAGTGC 525589 Query 18594 AGACCGATTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGT 18653 | || ||| || ||| | || || || || || | || || || ||||| || ||| Sbjct 525590 AAACTGATAGCCGCAGAAGTAGGAACAATGGCACCATAAATAATATTATTTCCGTAAAGT 525649 Query 18654 AAGGCTCCTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAAT 18713 | ||| || |||||||||||||||||||| || | || ||||| || || | || Sbjct 525650 TGAGATCCAGAAACAGGCTCACGAATACCATCAATAACTACTGGAGGGGCTGCGATGAAA 525709 Query 18714 GCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCA 18772 || || | |||| | | || |||||| | | | ||||||||| | || |||||||| Sbjct 525710 GCGATAAGAAATACAGAAGTTGCGGTCGATAAGGTAGGGATCATCAAAACACCAAACCA 525768 >seq7 Length=49172423 Score = 556 bits (616), Expect = 4e-154 Identities = 718/986 (73%), Gaps = 4/986 (0%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||||| || ||||||||||| | |||||||| Sbjct 6941895 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTT 6941954 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | ||| | | |||||||| || | || | ||| | | || | ||| Sbjct 6941955 AGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACGGA 6942014 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 |||||| |||||||| ||||| | || |||||||||||| ||| || | | ||||| Sbjct 6942015 TTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTAAA 6942074 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | || ||||||||||| | ||||||||||| | | |||||| || Sbjct 6942075 CCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAA 6942134 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGT 18133 |||||||| |||||||| | || ||||| || |||||||| || ||||||||||| || Sbjct 6942135 ACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGT 6942194 Query 18134 CTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCT 18193 ||||| ||||| || ||| | || || | || ||| ||| || || ||||| || Sbjct 6942195 TTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCT 6942254 Query 18194 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 18253 || | ||||| || | |||||||||||| |||| | || |||||||| Sbjct 6942255 GATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAATAC 6942314 Query 18254 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATAC 18313 || || ||||| | ||| || || ||||||||||| ||||| || || || || ||||| Sbjct 6942315 ACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATAC 6942374 Query 18314 GAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 18373 | ||| || |||||||||||| || || |||||||||||||| || || || ||||| Sbjct 6942375 AATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTG 6942434 Query 18374 TCCAAAAGGATA-AACGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCA 18431 |||| || || | | ||||| |||| || | |||||||| || || || ||||| ||| Sbjct 6942435 ACCAATTGGGTAGATCAAGAAA-ACTGCAGTA-GCAGCTGCAACAGGAGCTGAATATGCA 6942492 Query 18432 ACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAA 18491 ||| |||||| ||||||||||| || | | ||||||||||||| | || ||||||||| Sbjct 6942493 ACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAA 6942552 Query 18492 GCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAAC 18551 || | || | | ||||| | ||||| |||| ||| || || ||||| |||||| Sbjct 6942553 CAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAAC 6942612 Query 18552 CACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGAT 18611 || || || | || |||||||||||| || ||||| ||||| | |||||| | || Sbjct 6942613 CATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGTCGCCGAA 6942672 Query 18612 GACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGC 18671 | || | || || || || || || |||||||| || |||| | ||| || |||||| Sbjct 6942673 GTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGC 6942732 Query 18672 TCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTA 18731 |||||||||||||| || || || |||||||| || | || || || | |||| | | | Sbjct 6942733 TCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATACAGAA 6942792 Query 18732 GCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTG 18791 | |||||| || | | ||||||||| | || |||||||| || | ||| || ||||| Sbjct 6942793 GTTGCGGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTT 6942852 Query 18792 TTTGTACTCGTAACCCAGTCACATAA 18817 | || || || | ||||| ||| || Sbjct 6942853 TCAGTGCTGGTTATCCAGTTACAGAA 6942878 Score = 259 bits (286), Expect = 1e-64 Identities = 645/979 (66%), Gaps = 43/979 (4%) Strand=Plus/Plus Query 17841 TCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTTAGCTCTG 17900 ||||| ||||||||||||||||||| || ||||||||||| | ||||||||| | | | Sbjct 5596657 TCTAGATGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAACACGG 5596716 Query 17901 TTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGATTGGTTG 17960 | | | |||||||| || | || ||| | | || | ||||||| Sbjct 5596717 TCAACAATATCAGCCCAGGTGTTAATTACACAACCTTGACTATCAACTACTGATTGGTAA 5596776 Query 17961 AAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATG 18020 || ||||| ||||| | ||| ||||| |||||| ||| || | ||||| | | || Sbjct 5596777 AAATTGAAACCATTTAAATTGAAAGCTATAGTGTTGATACCTTACGCGGTAAACTAGATA 5596836 Query 18021 CAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAAGCTAGCA 18080 | | ||||||||||| | ||||||||||| | | |||||| || |||||| Sbjct 5596837 CCTACTATAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCA 5596896 Query 18081 TACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGTCTCTTCT 18140 || |||||||| | || ||||| || |||| ||| | ||||||||||| || ||||| Sbjct 5596897 TATTGGAAGATCAATCAGCCAAAATAACCATAAGCAACTACAATATTATAGGTTTCTTCC 5596956 Query 18141 TCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCTAATAAGT 18200 ||||| || ||| | || || | || ||| ||| | | ||||| | || | | Sbjct 5596957 TCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATGGTTTCCTTGATTATT 5597016 Query 18201 GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCA 18260 || | ||||||| |||||| | |||| | || | ||||| || || Sbjct 5597017 -AGAAGTTAACAAGGAAGAA-TGCATATTACTAAATAGGGAACCGTCAAATACACCAGCT 5597074 Query 18261 ACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATACGAACATG 18320 ||||| | ||| || || | ||||||||| ||||| || || | || ||||| | | | Sbjct 5597075 ACACCTAACATGTGAAATGAATGCATAAGAATATTATGCTCAACCTGAAATACAATCGTA 5597134 Query 18321 AAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAA 18380 || ||||||||||| || || |||||||||||||| || || || ||||| |||| Sbjct 5597135 AAGTTGAAAGTACCATAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTGACCAATT 5597194 Query 18381 GGATA-AACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACACAAAT 18439 || || | | ||||| |||| |||||||| || || | ||||| |||| | ||| Sbjct 5597195 GGGTAGATCAAGAAA-ACTGCACTAGCAGCTGCAACAGGAACTGAATATGCAATAACAAT 5597253 Query 18440 CCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGCTGCGAT 18499 ||| ||||||||||| || | | ||| |||||||| | || || ||| || || | Sbjct 5597254 CCAAGGGCGCATACCCAGACGAAAAC--AGTTCCCACTCACGACCGATGGAACAAGCTAC 5597311 Query 18500 GCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTC 18559 || | | ||||| | ||||| |||| ||| Sbjct 5597312 ACCAAGTAAGAAGTGTATAACAATTAGTTCATA--------------------------- 5597344 Query 18560 GAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGAC 18619 ||| |||| | | |||| | || |||| |||||| || | | | || | Sbjct 5597345 -AGGATTGCTGTT-------GTGGGAATAA-TGAAAACCGATAGCTGCAAAAGTAGGAAT 5597395 Query 18620 GATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAAT 18679 | || || | || || |||||| | |||| | ||| | |||||||||||||| Sbjct 5597396 AGTGGCACCATAAATAATATTGTTTTTGTGAAGTAGAGATCCAAAAACAGGCTCACGAAT 5597455 Query 18680 ACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGT 18739 | |||| || || |||||||| || |||| || || || | |||| | | || |||||| Sbjct 5597456 ATCATCAATATCTACGGGAGGGGCTGCAATGAAAGCGATAATAAATACAGAAGTTGCGGT 5597515 Query 18740 TAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTT-TGTAC 18798 || | || ||||||||| | || | |||||| || ||| || || || || || Sbjct 5597516 CAACAATGTAGGGATCATCAAAACACTAAACCATCCACTGTAAAGACGATTTTTCAGTGT 5597575 Query 18799 TCGTAACCCAGTCACATAA 18817 | || | ||||| ||| || Sbjct 5597576 TGGTTATCCAGTTACAGAA 5597594 >seq10 Length=496089 Score = 547 bits (606), Expect = 2e-151 Identities = 719/985 (73%), Gaps = 16/985 (2%) Strand=Plus/Plus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 |||||| ||||| |||||||| ||||||||||| |||||||| ||||| | |||||||| Sbjct 200363 AGCTAAGTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGGTT 200422 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCT---CCAGCTGCTACAAT 17950 ||| | ||| | | |||||||| || | || | ||| | | | ||||| Sbjct 200423 AGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACA-- 200480 Query 17951 GGATTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 18010 ||||||||||| ||||| ||||| || || ||||||||||| || || | || || Sbjct 200481 -GATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGT 200539 Query 18011 AAGCCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTT 18070 | ||| || | || |||||||||||||||||||| |||| | | ||||| Sbjct 200540 GAACCAGATTCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTT 200599 Query 18071 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATA 18130 || |||||||| |||||||| | || ||||| || |||||||| || ||||||||||| Sbjct 200600 GAAACTAGCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATA 200659 Query 18131 CGTCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTC 18190 |||||||| ||||| |||||||| || || | || ||| ||| ||||| ||||| Sbjct 200660 AGTCTCTTCCTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTC 200719 Query 18191 TCTAAT--AAGT-GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACC 18247 || || || | |||| || |||| || ||||||||| ||||| | || || Sbjct 200720 CCTGATCAAACTAGAGGT--TACCAAGGAA-CCATGCATAGCACTGAATAGGGAACCGCC 200776 Query 18248 GAATACCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTG 18307 |||||| || || ||||| | ||| ||||| |||||||||||||| ||||| || || || Sbjct 200777 GAATACACCAGCTACACCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCTGCCTG 200836 Query 18308 GAATACGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACT 18367 |||||| | ||| || ||||||||||| || || | ||||||||||||||| || || Sbjct 200837 GAATACAATCATAAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAGCT 200896 Query 18368 CCCTTGTCCAAAAGGATAAA-CGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAA 18425 ||||| |||| ||| |||| | ||||| || | || | |||||||| || || || ||| Sbjct 200897 TCCTTGACCAATAGGGTAAATCAAGAAA-ACAGCAGTA-GCAGCTGCAACAGGAGCTGAA 200954 Query 18426 TAAGCAACACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCC 18485 || |||||| |||||| || |||||||| || | ||||||||||||| | || ||| Sbjct 200955 TATGCAACAGCAATCCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCC 201014 Query 18486 ATGTAAGCTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTA 18545 || ||| || | || | | ||||| | ||||| || | ||| || || || || Sbjct 201015 ATATAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTG 201074 Query 18546 TATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCG 18605 ||||||||||| || | | |||||||||||| |||||||| ||||| | ||||| || Sbjct 201075 TATAACCACTCATCAACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCC 201134 Query 18606 TTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAG 18665 ||| | || | || || || || || || ||||||||||| ||||| | || || Sbjct 201135 GCAGAAGTAGGAATAATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAA 201194 Query 18666 ACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAAT 18725 |||||||| ||||||||||| || || || ||||| ||||| | || || || | |||| Sbjct 201195 ACAGGCTCGCGAATACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAAT 201254 Query 18726 GCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGG 18785 | | || |||||| || | | ||||||||| | || || ||||| || | ||| || Sbjct 201255 ACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACCGAACCATCCGATGTAAAGA 201314 Query 18786 CGGTTGTTTGTACTCGTAACCCAGT 18810 || || | || || || | ||||| Sbjct 201315 CGATTTTCAGTGCTAGTTATCCAGT 201339 >seq1 Length=52991155 Score = 542 bits (600), Expect = 9e-150 Identities = 709/976 (73%), Gaps = 4/976 (0%) Strand=Plus/Plus Query 17841 TCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTTAGCTCTG 17900 ||||| || ||||||||||||||||| || ||||||||||| | ||||||||||| | | Sbjct 38650393 TCTAGAGGAAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCACGG 38650452 Query 17901 TTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGATTGGTTG 17960 || | | |||||||| || | || | ||| | | || | ||||||||| Sbjct 38650453 TTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACGGATTGGTTA 38650512 Query 17961 AAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATATG 18020 |||||||| ||||| | || |||||||||||| ||| || | | ||||| || || Sbjct 38650513 AAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTAAATCAGATA 38650572 Query 18021 CAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAAGCTAGCA 18080 | || ||||||||||| | ||||||||||| | | |||||| || |||||| Sbjct 38650573 CCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAACTAGCA 38650632 Query 18081 TACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACGTCTCTTCT 18140 || |||||||| | || ||||| || |||||||| || ||||||||||| || ||||| Sbjct 38650633 TATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTTTCTTCC 38650692 Query 18141 TCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTCTAATAAGT 18200 ||||| || ||| | || || | || ||| ||| || || ||||| || || | Sbjct 38650693 TCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATCAAA 38650752 Query 18201 GAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATACCCCTGCA 18260 ||||| || | |||||||||||| |||| | || |||||||| || || Sbjct 38650753 CTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAATACACCAGCT 38650812 Query 18261 ACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATACGAACATG 18320 ||||| | ||| || || ||||||||||| ||||| || || || || ||||| | ||| Sbjct 38650813 ACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATCATA 38650872 Query 18321 AAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTTGTCCAAAA 18380 || ||||||||||| || || |||||||||||||| || || || ||||| |||| Sbjct 38650873 AAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTGACCAATT 38650932 Query 18381 GGATA-AACGAGAAATACTG-AGAAGGCAGCTGCTACTGGTGCGGAATAAGCAACACAAA 18438 || || | | ||||| |||| || | |||||||| || || || ||||| |||||| || Sbjct 38650933 GGGTAGATCAAGAAA-ACTGCAGTA-GCAGCTGCAACAGGAGCTGAATATGCAACAACAA 38650990 Query 18439 TCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAGCTGCGA 18498 |||| ||||||||||| || | | ||||||||||||| | || ||||||||| || | Sbjct 38650991 TCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACAAGCTA 38651050 Query 18499 TGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGT 18558 || | | ||||| | ||||| |||| ||| || || ||||| |||||||| || | Sbjct 38651051 CACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCATTCAT 38651110 Query 18559 CGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGA 18618 | | || |||||||||||| || ||||| ||||| | |||||| || ||| | || | Sbjct 38651111 CAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTAGGAA 38651170 Query 18619 CGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAA 18678 || || || || || || |||||||| | |||| | ||| || ||||||||||||| Sbjct 38651171 TAATGGCACCAGAAATAATATTGTTTCCGGAAAGTAGAGATCCAGAAACAGGCTCACGAA 38651230 Query 18679 TACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGG 18738 ||||||| || || || |||||||| || | || || || | |||| | | || ||||| Sbjct 38651231 TACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATACAGAAGTTGCGG 38651290 Query 18739 TTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTTTGTAC 18798 | || | | ||||||||| | || |||||||| || | ||| || ||||| | || | Sbjct 38651291 TCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGC 38651350 Query 18799 TCGTAACCCAGTCACA 18814 | || | ||||| ||| Sbjct 38651351 TGGTTATCCAGTTACA 38651366 Score = 172 bits (190), Expect = 2e-38 Identities = 223/308 (72%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 18510 AAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCACTCGTCGAGGGTTGCA 18569 ||||| | ||||| |||| ||| | || ||||| |||||||| || || | || |||| Sbjct 25174888 AAGTGTAGAACAATTAGTTCATAATGACCGCCGTTGTATAACCATTCATCAACGGATGCA 25174947 Query 18570 GCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGACGGGACGATTGCCCCT 18629 |||||||| || ||||| ||||| | |||||| | || | || | || || || Sbjct 25174948 GCTTCCCATATCGGGTAAAAGTGCAAACCGATAGTCGCCGAAGTAGGAATAATGGCACCA 25175007 Query 18630 GATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCTCACGAATACCATCTATG 18689 || || || |||||||| || |||| | ||| || |||||||||||||||||||| || Sbjct 25175008 GAAATAATATTGTTTCCGTAAAGTAGAGATCCAGAAACAGGCTCACGAATACCATCAATA 25175067 Query 18690 TCAACGGGAGGAGCAGCAACAAATGCAATCAAAAATGCTGTAGCTGCGGTTAAAAGTGCA 18749 || || |||||||| || | || || || | |||| | | || |||||| || | | | Sbjct 25175068 TCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTA 25175127 Query 18750 GGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGTTGTTTGTACTCGTAACCCAG 18809 |||||||| | || |||||||| || | ||| || ||||| | || | || | |||| Sbjct 25175128 GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGTGTTGGTTATCCAG 25175187 Query 18810 TCACATAA 18817 | ||| || Sbjct 25175188 TTACAGAA 25175195 >seq2 Length=45729672 Score = 170 bits (188), Expect = 6e-38 Identities = 204/277 (74%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 18541 CGTTATATAACCACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGA 18600 |||| |||||||| || || | || |||||||||||| |||||||| ||||| | ||||| Sbjct 37873470 CGTTGTATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGTGCAAACCGA 37873529 Query 18601 TTGCGTTAGATGACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTC 18660 | || ||| | || | || || || || || || |||||||| || |||| | || Sbjct 37873530 TAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATC 37873589 Query 18661 CTGAGACAGGCTCACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCA 18720 | || |||||||||||||||||||| || || || |||||||| || | || || || | Sbjct 37873590 CAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAA 37873649 Query 18721 AAAATGCTGTAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGT 18780 |||| | | || |||||| || | | ||||||||| | || | |||||| || | || Sbjct 37873650 TAAATACAGAAGTTGCGGTCAATAAGGTAGGGATCATCAAAACACAAAACCATCCAATGT 37873709 Query 18781 AGAGGCGGTTGTTTGTACTCGTAACCCAGTCACATAA 18817 | || ||||| | || || || | ||||| ||| || Sbjct 37873710 AAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 37873746 >seq3 Length=55515152 Score = 154 bits (170), Expect = 4e-33 Identities = 199/275 (72%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 17834 AGCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTT 17893 ||||| ||||| |||||||||||||||||||| || |||||||||| | |||||||| Sbjct 40133336 AGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTTCATACCAAGGTT 40133277 Query 17894 AGCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGA 17953 ||| | || | | |||||||| || | || | ||| | | || | ||| Sbjct 40133276 AGCACGATTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACGGA 40133217 Query 17954 TTGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 18013 |||||| |||||||| ||||| | || |||||||||||| ||| || | | ||||| Sbjct 40133216 TTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTAAA 40133157 Query 18014 CCATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTAGACTCCTGCTATTGTTAAA 18073 ||| || | || ||||||||||| | ||||||||||| | | |||||| || Sbjct 40133156 CCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAAAATTGTTGAA 40133097 Query 18074 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGC 18108 |||||||| |||||||| | || ||||| |||| Sbjct 40133096 ACTAGCATATTGGAAGATCAATCGGCCAAAATAGC 40133062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151314470166578