Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_020838.1 Length=45728 Score E Sequences producing significant alignments: (Bits) Value seq2187 556 4e-154 seq4 556 4e-154 seq7 554 1e-153 seq1 544 2e-150 seq10 540 3e-149 seq3 212 2e-50 seq2 114 4e-21 >seq2187 Length=124033 Score = 556 bits (616), Expect = 4e-154 Identities = 722/995 (73%), Gaps = 2/995 (0%) Strand=Plus/Minus Query 21460 CCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAA 21519 |||| || | || ||||| || |||||||| || || || || |||||||| || || | Sbjct 123532 CCTCGACCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCA 123473 Query 21520 AGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG 21579 |||||||| |||||||||| ||| |||||||||||||| || || | || | | | Sbjct 123472 TACCAAGGTTAGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTAT 123413 Query 21580 CTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAA 21639 | | | ||||||||||||||||||||||| |||||||||||||| || | || | Sbjct 123412 CAACTACGGATTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTA 123353 Query 21640 GCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGG 21699 ||| | |||||| |||||||| |||||||| ||||| || |||||||| | | ||| | Sbjct 123352 ACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAG 123293 Query 21700 AATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAA 21759 |||| || || ||||||||||||||||| | || |||||||| || |||||||| |||| Sbjct 123292 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAA 123233 Query 21760 TATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAG 21819 |||| || || |||||||||||||| || ||||||| | || || | | ||| | Sbjct 123232 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 123173 Query 21820 TCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCC 21879 | || || | || | || || |||| | ||||||||||||| || | | Sbjct 123172 TGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAAC 123113 Query 21880 CACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAG 21939 | || ||||| || || ||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct 123112 CGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAG 123053 Query 21940 CCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAA 21999 |||| || || | ||| ||||||| || ||||| || || | |||||| |||| |||| Sbjct 123052 CCTGAAATACAATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCATCTGAAA 122993 Query 22000 AAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAG 22059 | || || |||| || || | | ||| || ||||| ||||| || |||||||| | Sbjct 122992 AGCTTCCTTGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCAACAGGAGCTG 122933 Query 22060 AGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTC 22119 | || |||||| ||||| || | ||| || || ||| | |||||||||||||| || | Sbjct 122932 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGAC 122873 Query 22120 CCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGT 22179 |||||||| | || |||| | |||||| | || | |||| | |||||||||| Sbjct 122872 CCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGT 122813 Query 22180 TGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGG 22239 |||| | ||||||||||| | ||||||||||| || ||||| ||||| | ||||| | Sbjct 122812 TGTATAACCATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAG 122753 Query 22240 CATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAG 22299 | | |||| | ||| || || || || ||||| || || | || || |||| Sbjct 122752 CCGCCGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAG 122693 Query 22300 CGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAA 22359 || || || || || ||||| || || || || || || | | || |||||||||| Sbjct 122692 AAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAA 122633 Query 22360 AACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAA 22418 | || || |||| ||| ||| | || ||||| | || || |||||||| | ||| Sbjct 122632 ATACAGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAA 122574 Query 22419 AGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 |||||||| | ||| ||| | |||| ||| || Sbjct 122573 AGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 122539 >seq4 Length=56582383 Score = 556 bits (616), Expect = 4e-154 Identities = 722/995 (73%), Gaps = 2/995 (0%) Strand=Plus/Minus Query 21460 CCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAA 21519 |||| || | || ||||| || |||||||| || || || || |||||||| || || | Sbjct 18305201 CCTCGACCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCA 18305142 Query 21520 AGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG 21579 |||||||| |||||||||| ||| |||||||||||||| || || | || | | | Sbjct 18305141 TACCAAGGTTAGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTAT 18305082 Query 21580 CTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAA 21639 | | | ||||||||||||||||||||||| |||||||||||||| || | || | Sbjct 18305081 CAACTACGGATTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTA 18305022 Query 21640 GCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGG 21699 ||| | |||||| |||||||| |||||||| ||||| || |||||||| | | ||| | Sbjct 18305021 ACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAG 18304962 Query 21700 AATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAA 21759 |||| || || ||||||||||||||||| | || |||||||| || |||||||| |||| Sbjct 18304961 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAA 18304902 Query 21760 TATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAG 21819 |||| || || |||||||||||||| || ||||||| | || || | | ||| | Sbjct 18304901 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 18304842 Query 21820 TCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCC 21879 | || || | || | || || |||| | ||||||||||||| || | | Sbjct 18304841 TGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAAC 18304782 Query 21880 CACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAG 21939 | || ||||| || || ||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct 18304781 CGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAG 18304722 Query 21940 CCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAA 21999 |||| || || | ||| ||||||| || ||||| || || | |||||| |||| |||| Sbjct 18304721 CCTGAAATACAATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCATCTGAAA 18304662 Query 22000 AAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAG 22059 | || || |||| || || | | ||| || ||||| ||||| || |||||||| | Sbjct 18304661 AGCTTCCTTGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCAACAGGAGCTG 18304602 Query 22060 AGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTC 22119 | || |||||| ||||| || | ||| || || ||| | |||||||||||||| || | Sbjct 18304601 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGAC 18304542 Query 22120 CCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGT 22179 |||||||| | || |||| | |||||| | || | |||| | |||||||||| Sbjct 18304541 CCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGT 18304482 Query 22180 TGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGG 22239 |||| | ||||||||||| | ||||||||||| || ||||| ||||| | ||||| | Sbjct 18304481 TGTATAACCATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAG 18304422 Query 22240 CATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAG 22299 | | |||| | ||| || || || || ||||| || || | || || |||| Sbjct 18304421 CCGCCGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCCAG 18304362 Query 22300 CGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAA 22359 || || || || || ||||| || || || || || || | | || |||||||||| Sbjct 18304361 AAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAA 18304302 Query 22360 AACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAA 22418 | || || |||| ||| ||| | || ||||| | || || |||||||| | ||| Sbjct 18304301 ATACAGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAA 18304243 Query 22419 AGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 |||||||| | ||| ||| | |||| ||| || Sbjct 18304242 AGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 18304208 Score = 116 bits (128), Expect = 1e-21 Identities = 203/290 (70%), Gaps = 8/290 (3%) Strand=Plus/Plus Query 22168 ATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGT 22227 || || || ||||||| | ||||||||||| | ||||||||||| |||||||| |||| Sbjct 18030826 ATCGATCGTCGTTGTATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGT 18030885 Query 22228 GTAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACA 22287 | | ||||| || | | |||| | ||| || || || || ||||| || || | Sbjct 18030886 GCAAACCGATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAA 18030945 Query 22288 ACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAA 22347 || || |||| || || || || || ||||| || || || || || || | | | Sbjct 18030946 GTAGAGATCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGA 18031005 Query 22348 AGGCGATAATAAA-AC--AAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCG 22403 | ||||||||||| || ||||| |||| ||| ||| | || ||||| | || || Sbjct 18031006 AAGCGATAATAAATACGGAAGTT---GCGGTCAATAAGGTA-GGGATCATCAAAACACCA 18031061 Query 22404 AACCATCCTACATAAAGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 |||||||| | ||||||||||| | ||| ||| | |||| ||| || Sbjct 18031062 AACCATCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 18031111 >seq7 Length=49172423 Score = 554 bits (614), Expect = 1e-153 Identities = 724/997 (73%), Gaps = 6/997 (1%) Strand=Plus/Plus Query 21460 CCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAA 21519 |||| || | || ||||| || |||||||| || || || || |||||||| || || | Sbjct 6941885 CCTCGACCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCA 6941944 Query 21520 AGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG 21579 |||||||| |||||||||| ||| |||||||||||||| || || | || | | | Sbjct 6941945 TACCAAGGTTAGCACGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTAT 6942004 Query 21580 CTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAA 21639 | | | ||||||||||||||||||||||| |||||||||||||| || | || | Sbjct 6942005 CAACTACGGATTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTA 6942064 Query 21640 GCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGG 21699 ||| | |||||| |||||||| |||||||| ||||| || |||||||| | | ||| | Sbjct 6942065 ACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAG 6942124 Query 21700 AATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAA 21759 |||| || || ||||||||||||||||| | || |||||||| || |||||||| |||| Sbjct 6942125 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCAGCTACAA 6942184 Query 21760 TATTGTAAGTCTCTTCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAG 21819 |||| || || |||||||||||||| || ||||||| | || || | | ||| | Sbjct 6942185 TATTATAGGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTG 6942244 Query 21820 TCGTCTCACGAATGAGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCC 21879 | || || | || | || || |||| | ||||||||||||| || | | Sbjct 6942245 TGGTTTCCCTGATCAAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAAC 6942304 Query 21880 CACCAAATACGCCGGCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAG 21939 | || ||||| || || ||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct 6942305 CGCCGAATACACCAGCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAG 6942364 Query 21940 CCTGGAACACCAGCATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAA 21999 |||| || || | ||| ||||||| || ||||| || || | |||||| |||| |||| Sbjct 6942365 CCTGAAATACAATCATAAAGTTGAAAGTACCGGAGATTCCTAGAGGCATACCATCTGAAA 6942424 Query 22000 AAGAGCCCTGTCCAAACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAG 22059 | || || |||| || || | | ||| || ||||| ||||| || |||||||| | Sbjct 6942425 AGCTTCCTTGACCAATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCAACAGGAGCTG 6942484 Query 22060 AGTACGCAACAAAGATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTC 22119 | || |||||| ||||| || | ||| || || ||| | |||||||||||||| || | Sbjct 6942485 AATATGCAACAGCAATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGAC 6942544 Query 22120 CCATGTAAGCAAAGACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGT 22179 |||||||| | || |||| | |||||| | || | |||| | |||||||||| Sbjct 6942545 CCATGTAACAAGCTACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGT 6942604 Query 22180 TGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGG 22239 |||| | ||||||||||| | ||||||||||| || ||||| ||||| | ||||| | Sbjct 6942605 TGTATAACCATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAG 6942664 Query 22240 CATTACTG--CTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCC 22297 | | | | |||| | ||| || || || || ||||| || || | || || || Sbjct 6942665 --TCGCCGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAGTAGAGATCC 6942722 Query 22298 AGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAAT 22357 || || || || || || ||||| || || || || || || | | || |||||||| Sbjct 6942723 AGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAAT 6942782 Query 22358 AAAACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACAT 22416 ||| || || |||| ||| ||| | || ||||| | || || |||||||| | | Sbjct 6942783 AAATACAGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGT 6942841 Query 22417 AAAGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 |||||||||| | ||| ||| | |||| ||| || Sbjct 6942842 AAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 6942878 Score = 291 bits (322), Expect = 2e-74 Identities = 472/677 (70%), Gaps = 4/677 (1%) Strand=Plus/Plus Query 21474 AGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCA 21533 ||||| || ||||||| || || || || |||||||| || || | |||||||| || Sbjct 5596654 AGGTCTAGATGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAACA 5596713 Query 21534 CGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGG 21593 |||| || ||| |||||||||||||| || || || | | | | | | |||||| Sbjct 5596714 CGGTCAACAATATCAGCCCAGGTGTTAATTACACAACCTTGACTATCAACTACTGATTGG 5596773 Query 21594 TTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAA 21653 | ||| ||||||||||| || |||||||| || || | || ||| | |||| | Sbjct 5596774 TAAAAATTGAAACCATTTAAATTGAAAGCTATAGTGTTGATACCTTACGCGGTAAACTAG 5596833 Query 21654 ATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTA 21713 |||||||| | |||||| ||||| || |||||||| | | ||| ||||| || || ||| Sbjct 5596834 ATACCTACTATAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAACTA 5596893 Query 21714 GCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCT 21773 |||||||||||||| | | |||||||| || | |||| | |||||||| || || ||| Sbjct 5596894 GCATATTGGAAGATCAATCAGCCAAAATAACCATAAGCAACTACAATATTATAGGTTTCT 5596953 Query 21774 TCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATG 21833 ||||||||||| || ||||||| | || || | | || | || || || Sbjct 5596954 TCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTTTATGGTTTCCTTGATT 5597013 Query 21834 AGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCG 21893 | | || || | || | | |||||| | || | || ||||||| || Sbjct 5597014 ATT--AGAAGTTAACAAGGAAGAATGCATATTACTAAATAGGGAACCGTCAAATACACCA 5597071 Query 21894 GCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGC 21953 || ||||| | ||||||||| | ||||||||||||||| |||||| |||| || || | | Sbjct 5597072 GCTACACCTAACATGTGAAATGAATGCATAAGAATATTATGCTCAACCTGAAATACAATC 5597131 Query 21954 ATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCA 22013 | ||||||| || || | || || | |||||| |||| ||||| || || ||| Sbjct 5597132 GTAAAGTTGAAAGTACCATAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTGACCA 5597191 Query 22014 AACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAG 22073 | || || | | ||| || ||| | ||||| || |||||| | || || |||| || Sbjct 5597192 ATTGGGTAGATCAAGAAAACTGCACTAGCAGCTGCAACAGGAACTGAATATGCAATAACA 5597251 Query 22074 ATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAG 22133 ||||| || | ||| || || ||| | | ||||||||||| || || ||| || | Sbjct 5597252 ATCCAAGGGCGCATACCCAGACGAAAAC--AGTTCCCACTCACGACCGATGGAACAAGCT 5597309 Query 22134 ACGCCAATGAGGAAGTG 22150 || |||| | |||||| Sbjct 5597310 ACACCAAGTAAGAAGTG 5597326 >seq1 Length=52991155 Score = 544 bits (602), Expect = 2e-150 Identities = 706/973 (73%), Gaps = 2/973 (0%) Strand=Plus/Plus Query 21474 AGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCA 21533 ||||| || || ||||| || || || || |||||||| || || | |||||||| ||| Sbjct 38650390 AGGTCTAGAGGAAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAGGTTAGCA 38650449 Query 21534 CGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGG 21593 ||||||| ||| |||||||||||||| || || | || | | | | | | |||||| Sbjct 38650450 CGGTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACGGATTGG 38650509 Query 21594 TTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAA 21653 ||||||||||||||||| |||||||||||||| || | || | ||| | ||| || Sbjct 38650510 TTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTAACGCGGTAAATCAG 38650569 Query 21654 ATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTA 21713 |||||||| |||||||| ||||| || |||||||| | | ||| ||||| || || ||| Sbjct 38650570 ATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAGAATTGTTGAAACTA 38650629 Query 21714 GCATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCT 21773 |||||||||||||| | || |||||||| || |||||||| |||||||| || || ||| Sbjct 38650630 GCATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCTACAATATTATAGGTTTCT 38650689 Query 21774 TCCTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATG 21833 ||||||||||| || ||||||| | || || | | ||| || || || | || Sbjct 38650690 TCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTCCCTGATC 38650749 Query 21834 AGTGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCG 21893 | || || |||| | ||||||||||||| || | || || ||||| || Sbjct 38650750 AAACTAGAAGTTACCAAGGAACCGTGCATAGCACTAAATAGGGAACCGCCGAATACACCA 38650809 Query 21894 GCCACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGC 21953 || ||||| | ||||||||| ||||||||||||||||| ||||||||||| || || | | Sbjct 38650810 GCTACACCTAACATGTGAAATGGATGCATAAGAATATTATGCTCAGCCTGAAATACAATC 38650869 Query 21954 ATGTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCA 22013 || ||||||| || || || || || | |||||| |||| ||||| || || ||| Sbjct 38650870 ATAAAGTTGAAAGTACCAGAGATTCCTAGAGGCATACCATCTGAAAAGCTTCCTTGACCA 38650929 Query 22014 AACGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAG 22073 | || || | | ||| || ||||| ||||| || |||||||| || || ||||||| Sbjct 38650930 ATTGGGTAGATCAAGAAAACTGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAACA 38650989 Query 22074 ATCCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAG 22133 ||||| || | ||| || || ||| | |||||||||||||| || ||||||||| | Sbjct 38650990 ATCCAAGGGCGCATACCCAGACGAAAACTAAGTTCCCACTCACGACCCATGTAACAAGCT 38651049 Query 22134 ACGCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCA 22193 || |||| | |||||| | || | |||| | |||||||||||||| | ||||||| Sbjct 38651050 ACACCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCGCCGTTGTATAACCATTCA 38651109 Query 22194 TCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGA 22253 |||| | ||||||||||| || ||||| ||||| | ||||| || | | ||| Sbjct 38651110 TCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCAAACCGATAGCCGCAGAAGTAGGA 38651169 Query 22254 ACGACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGG 22313 | | ||| || || || || ||||| || | | || || |||| || || || || Sbjct 38651170 ATAATGGCACCAGAAATAATATTGTTTCCGGAAAGTAGAGATCCAGAAACAGGCTCACGA 38651229 Query 22314 ATTCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTAGCG 22373 || ||||| || || || || || || | | || ||||||||||| || || ||| Sbjct 38651230 ATACCATCAATATCTACTGGAGGAGCTGCGATGAAAGCGATAATAAATACAGAAGTTGCG 38651289 Query 22374 G-CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATTAGT 22432 | ||| ||| | || ||||| | || || |||||||| | ||||||||||| | ||| Sbjct 38651290 GTCAATAAGGTA-GGGATCATCAAAACACCAAACCATCCAATGTAAAGACGGTTTTCAGT 38651348 Query 22433 AGAGGTGACCCAG 22445 ||| | |||| Sbjct 38651349 GCTGGTTATCCAG 38651361 Score = 116 bits (128), Expect = 1e-21 Identities = 200/286 (70%), Gaps = 6/286 (2%) Strand=Plus/Plus Query 22171 GACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTA 22230 ||||||||||||| | ||||||||||| | ||||||||||| || ||||| ||||| | Sbjct 25174913 GACCGCCGTTGTATAACCATTCATCAACGGATGCAGCTTCCCATATCGGGTAAAAGTGCA 25174972 Query 22231 GTCCGATGGCATTACTG--CTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACAA 22288 ||||| | | | | | |||| | ||| || || || || ||||| || || | Sbjct 25174973 AACCGATAG--TCGCCGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAAG 25175030 Query 22289 CAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAAA 22348 || || |||| || || || || || ||||| || || || || || || | | || Sbjct 25175031 TAGAGATCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGAA 25175090 Query 22349 GGCGATAATAAAACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAACC 22407 ||||||||||| || || |||| ||| ||| | || ||||| | || || |||| Sbjct 25175091 AGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACCAAACC 25175149 Query 22408 ATCCTACATAAAGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 |||| | ||||||||||| | ||| ||| | |||| ||| || Sbjct 25175150 ATCCAATGTAAAGACGGTTTTCAGTGTTGGTTATCCAGTTACAGAA 25175195 >seq10 Length=496089 Score = 540 bits (598), Expect = 3e-149 Identities = 696/958 (73%), Gaps = 2/958 (0%) Strand=Plus/Plus Query 21476 GTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAAAGCCAAGGTTGGCACG 21535 ||| || ||||||||||| || || || || ||||| || || | |||||||| ||||| Sbjct 200369 GTCTAGAGGGAAGTTGTGAGCATTACGTTCGTGCATTACTTCCATACCAAGGTTAGCACG 200428 Query 21536 GTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAGCTAGCAGAGATTGGTT 21595 ||||| ||| |||||||||||||| || || | || | | | | | | ||||||||| Sbjct 200429 GTTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTATCAACTACAGATTGGTT 200488 Query 21596 AAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAAGCGCAGCAAACCAAAT 21655 || ||||||||||| | |||||||||||| ||| | || | |||| ||||| || Sbjct 200489 GAAATTGAAACCATTTAGGTTGAAAGCCATAGTACTAATACCTAAAGCAGTGAACCAGAT 200548 Query 21656 ACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGGAATTATTAAAGCTAGC 21715 ||||| |||||||| ||||| | ||||| || | | ||| || || || || ||||| Sbjct 200549 TCCTACTACAGGCCAAGCAGCCAAGAAGAAGTGTAAAGAACGAGAGTTGTTGAAACTAGC 200608 Query 21716 ATATTGGAAGATAAGCCGACCAAAATAGCCGTGAGCAGCAACAATATTGTAAGTCTCTTC 21775 |||||||||||| | || |||||||| || |||||||| |||||||| ||||||||||| Sbjct 200609 ATATTGGAAGATTAATCGGCCAAAATAACCATGAGCAGCCACAATATTATAAGTCTCTTC 200668 Query 21776 CTCTTGACCAAACTTGTAACCATAGTTCTGTGAAACCTCTTCAGTCGTCTCACGAATGAG 21835 |||||||||||| |||||||| | || || | | |||||| || || | || | Sbjct 200669 CTCTTGACCAAATTTGTAACCCTCATTAGCAGATTCATTTTCAGTAGTTTCCCTGATCAA 200728 Query 21836 TGACGACGTGACCAGGCTACCGTGCATAGCAGAGAACAAACTCCCACCAAATACGCCGGC 21895 || || |||| | ||| ||||||||| ||| | || || ||||| || || Sbjct 200729 ACTAGAGGTTACCAAGGAACCATGCATAGCACTGAATAGGGAACCGCCGAATACACCAGC 200788 Query 21896 CACACCCAGCATGTGAAAAGGATGCATAAGAATATTGTGCTCAGCCTGGAACACCAGCAT 21955 ||||| | |||||| || ||||||||||| || |||||||| |||||||| || | ||| Sbjct 200789 TACACCTAACATGTGGAATGGATGCATAAGGATGTTGTGCTCTGCCTGGAATACAATCAT 200848 Query 21956 GTAGTTGAAGGTGCCGGATATCCCCAAGGGCATAGCATCAGAAAAAGAGCCCTGTCCAAA 22015 ||||||| || || || || || || |||||| |||||||||| || || |||| Sbjct 200849 AAAGTTGAAAGTACCAGAGATTCCTAAAGGCATACCATCAGAAAAGCTTCCTTGACCAAT 200908 Query 22016 CGGATAAACAAGGAACACAGCAGTCGCAGCGGCGACAGGAGCAGAGTACGCAACAAAGAT 22075 || |||| | ||| |||||||| ||||| || |||||||| || || |||||| || Sbjct 200909 AGGGTAAATCAAGAAAACAGCAGTAGCAGCTGCAACAGGAGCTGAATATGCAACAGCAAT 200968 Query 22076 CCAGGGCCTCATCCCTAGTCGATAGCTAAGTTCCCACTCTCGTCCCATGTAAGCAAAGAC 22135 ||| || | ||| || || || | |||||||||||||| || ||||| ||| | || Sbjct 200969 CCAAGGACGCATACCCAGACGGAAACTAAGTTCCCACTCACGACCCATATAACAAGCTAC 201028 Query 22136 GCCAATGAGGAAGTGGAATACGGTGAGTTGGAATGGACCGCCGTTGTACAGCCATTCATC 22195 |||| | |||||| | || | || | | ||||| || ||||| | ||| ||||| Sbjct 201029 ACCAAGTAAGAAGTGTAGAACAATTAGCTCATAAGGACCACCATTGTATAACCACTCATC 201088 Query 22196 AAGTGTAGCAGCTTCCCAAATTGGGTAGAAGTGTAGTCCGATGGCATTACTGCTCGGAAC 22255 || | |||||||||||||||||||| ||||| | |||||| || | | |||| Sbjct 201089 AACAGATGCAGCTTCCCAAATTGGGTAAAAGTGCAATCCGATCGCCGCAGAAGTAGGAAT 201148 Query 22256 GACGGCTCCTGATATGATGTTGTTACCATACAACAGGGAGCCAGCGACGGGTTCTCGGAT 22315 | || || || || || ||||| ||||| | | || |||| || || || || || Sbjct 201149 AATAGCACCAGAGATAATATTGTTTCCATAAAGTAAAGAACCAGAAACAGGCTCGCGAAT 201208 Query 22316 TCCATCGATGTCAACAGGTGGTGCGCCAACAAAGGCGATAATAAAACAAGTTGTAGCGG- 22374 ||||| || || || || || || | | |||||||||||||| || || |||| Sbjct 201209 ACCATCAATATCTACTGGAGGGGCAGCGATGAAGGCGATAATAAATACAGAAGTTGCGGT 201268 Query 22375 CAAGGAGGCACGGAATCATAAGGACTCCGAACCATCCTACATAAAGACGGTTATTAGT 22432 ||| ||| | || ||||| | || ||||||||||| | |||||||| || | ||| Sbjct 201269 CAATAAGGTA-GGGATCATCAAAACACCGAACCATCCGATGTAAAGACGATTTTCAGT 201325 >seq3 Length=55515152 Score = 212 bits (234), Expect = 2e-50 Identities = 218/285 (76%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 21460 CCTCCACGGATGCAAGGTCAAGCGGGAAGTTGTGTGCGTTCCGCTCATGCATCACCTCAA 21519 |||| || | || ||||| || |||||||| || || || || |||||||| || | | Sbjct 40133346 CCTCGACCGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTTCA 40133287 Query 21520 AGCCAAGGTTGGCACGGTTAAGAATGTCAGCCCAGGTGTTGATCACCTGTCCATCAGCAG 21579 |||||||| ||||| |||| ||| |||||||||||||| || || | || | | | Sbjct 40133286 TACCAAGGTTAGCACGATTAATAATATCAGCCCAGGTGTTAATTACACGACCTTGACTAT 40133227 Query 21580 CTAGCAGAGATTGGTTAAAGTTGAAACCATTCAAGTTGAAAGCCATGGTAGACACGCCAA 21639 | | | ||||||||||||||||||||||| |||||||||||||| || | || | Sbjct 40133226 CAACTACGGATTGGTTAAAGTTGAAACCATTTAAGTTGAAAGCCATAGTGCTGATACCTA 40133167 Query 21640 GCGCAGCAAACCAAATACCTACAACAGGCCAGGCAGCAAGAAAGAAATGAAGACTACGGG 21699 ||| | |||||| |||||||| |||||||| ||||| || |||||||| | | ||| Sbjct 40133166 ACGCGGTAAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAATGTAAAGAACGAA 40133107 Query 21700 AATTATTAAAGCTAGCATATTGGAAGATAAGCCGACCAAAATAGC 21744 |||| || || ||||||||||||||||| | || |||||||||| Sbjct 40133106 AATTGTTGAAACTAGCATATTGGAAGATCAATCGGCCAAAATAGC 40133062 >seq2 Length=45729672 Score = 114 bits (126), Expect = 4e-21 Identities = 199/287 (69%), Gaps = 2/287 (1%) Strand=Plus/Plus Query 22168 ATGGACCGCCGTTGTACAGCCATTCATCAAGTGTAGCAGCTTCCCAAATTGGGTAGAAGT 22227 || || || ||||||| | ||||||||||| | ||||||||||| |||||||| |||| Sbjct 37873461 ATCGATCGTCGTTGTATAACCATTCATCAACGGATGCAGCTTCCCATATTGGGTAAAAGT 37873520 Query 22228 GTAGTCCGATGGCATTACTGCTCGGAACGACGGCTCCTGATATGATGTTGTTACCATACA 22287 | | ||||| || | | |||| | ||| || || || || ||||| || || | Sbjct 37873521 GCAAACCGATAGCCGCAGAAGTAGGAATAATGGCACCAGAAATAATATTGTTTCCGTAAA 37873580 Query 22288 ACAGGGAGCCAGCGACGGGTTCTCGGATTCCATCGATGTCAACAGGTGGTGCGCCAACAA 22347 || || |||| || || || || || ||||| || || || || || || | | | Sbjct 37873581 GTAGAGATCCAGAAACAGGCTCACGAATACCATCAATATCTACTGGAGGAGCTGCGATGA 37873640 Query 22348 AGGCGATAATAAAACAAGTTGTAGCGG-CAAGGAGGCACGGAATCATAAGGACTCCGAAC 22406 | ||||||||||| || || |||| ||| ||| | || ||||| | || | ||| Sbjct 37873641 AAGCGATAATAAATACAGAAGTTGCGGTCAATAAGGTA-GGGATCATCAAAACACAAAAC 37873699 Query 22407 CATCCTACATAAAGACGGTTATTAGTAGAGGTGACCCAGGAACAAAA 22453 ||||| | ||||||||||| | ||| ||| | |||| ||| || Sbjct 37873700 CATCCAATGTAAAGACGGTTTTCAGTGCTGGTTATCCAGTTACAGAA 37873746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146204202886860