Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_020839.1 Length=39573 Score E Sequences producing significant alignments: (Bits) Value seq1420 104 6e-18 >seq1420 Length=1851 Score = 104 bits (114), Expect = 6e-18 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 30840 GCGCTTCGAGAAGCGCATGTAGGTCTTCGACCCGATCACCCGGATCGCATCGCGGATCGC 30899 ||||| ||| ||| | ||| | ||| ||||||||| | | || |||| |||||| Sbjct 304 GCGCTCGTAGACGCGGACGTATGACTTGCTGCCGATCACCTGCAGGGCTTCGCCGATCGC 245 Query 30900 GCGCATCGCCTCCTGCCAGCGCGGGTCCTCGATCTCGAGGCGCAGCAGCATGAAGACTTC 30959 |||||||| ||| |||||||||| || ||| || | || ||||| || || Sbjct 244 CCGCATCGCTTCCAGCCAGCGCGGATCGGTGATGTCCAATCGACGCAGCGCGAGCACGCG 185 Query 30960 GGAGCGGTTGATCTGGCCTTCCTTGTCGGTGTTGAAGGCGCGCGTGACGATCGCACGGAT 31019 | | |||||| ||||||||||||||||| || || |||| |||||||| | || Sbjct 184 GCCGGTGTTGATTTGGCCTTCCTTGTCGGTCGCAAACGCCTGCGTCACGATCGCCTGAAT 125 Query 31020 CTCGGGACGGCTGTCGGCCGCCCATTCGTTCAGACACTCGTCGATCA 31066 ||| || ||| || | ||| ||| |||||||||||||||| Sbjct 124 CTCAGGGCGGGCATCCAGAGTCCAGTCGCGAAGACACTCGTCGATCA 78 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126508714404290