Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_020840.1 Length=38987 Score E Sequences producing significant alignments: (Bits) Value seq1130 80.6 7e-11 >seq1130 Length=2756 Score = 80.6 bits (88), Expect = 7e-11 Identities = 99/134 (74%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 11916 GACTGGGTCATCTGTGGTGGCGAGAGCGGCGATGGCGCCCGGCCGATGCACCCAGAGTGG 11975 || ||||| || || || ||||| ||||| ||| ||| || |||||||| || || ||| Sbjct 2471 GATTGGGTGATTTGCGGCGGCGAAAGCGGGCATGCCGCGCGCCCGATGCATCCCGATTGG 2530 Query 11976 GCCAGGCAGGTGCGTGACCAGTGCGCGGCCGCTGATGTGCCGTTCCTGTTTAAGCAATGG 12035 | | | |||| || |||||| |||| || | || ||||| |||| ||||||||| Sbjct 2531 GTTCGCGCGCTGCGCGATCAGTGCACGGCGGCAGGCGTCCCGTTTTTGTTCAAGCAATGG 2590 Query 12036 GGGGACTGGCTGCC 12049 || || ||| |||| Sbjct 2591 GGCGAATGG-TGCC 2603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124633563104406