Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_020866.1 Length=40231 Score E Sequences producing significant alignments: (Bits) Value seq1420 104 6e-18 >seq1420 Length=1851 Score = 104 bits (114), Expect = 6e-18 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 8704 TGATCGACGAGTGTCTGAACGAATGGGCGGCCGACAGCCGTCCCGAGATCCGTGCGATCG 8763 |||||||||||||||| ||| ||| | || ||| || ||||| | ||||||| Sbjct 78 TGATCGACGAGTGTCTTCGCGACTGGACTCTGGATGCCCGCCCTGAGATTCAGGCGATCG 137 Query 8764 TCACGCGCGCCTTCAACACCGACAAGGAAGGCCAGATCAACCGCTCCGAAGTCTTCATGC 8823 | |||| || || ||||||||||||||||| |||||| | | || || || Sbjct 138 TGACGCAGGCGTTTGCGACCGACAAGGAAGGCCAAATCAACACCGGCCGCGTGCTCGCGC 197 Query 8824 TGCTGCGCCTCGAGATCGAGGACCCGCGCTGGCAGGAGGCGATGCGCGCGATCCGCGATG 8883 ||| || | || ||| || |||||||||| ||| |||||||| |||||| |||| | Sbjct 198 TGCGTCGATTGGACATCACCGATCCGCGCTGGCTGGAAGCGATGCGGGCGATCGGCGAAG 257 Query 8884 CGATCCGGGTGATCGGGTCGAAGACCTACATGCGCTTCTCGAAGCGC 8930 | | | ||||||||| ||| | ||| | ||| ||| ||||| Sbjct 258 CCCTGCAGGTGATCGGCAGCAAGTCATACGTCCGCGTCTACGAGCGC 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 128614259720542