Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Medicago_20truncatula_20[refseq_20GCF_5F000219495.3_202014-06-18] 2,187 sequences; 412,924,424 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq4 136 7e-27 seq8 113 8e-20 seq1 105 1e-17 seq5 102 1e-16 seq7 98.7 2e-15 seq6 93.3 8e-14 >seq4 Length=56582383 Score = 136 bits (150), Expect = 7e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||||| ||| |||| ||| | |||| || || || ||||| || Sbjct 31260479 ATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCA 31260538 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | |||||| || ||||| || | ||||| ||||||||| Sbjct 31260539 GCTAGGGTTCTTCCATCCTCGAGTTGTTTCCCAGCAAAGATAAGCCTCTGCTGATCAGGA 31260598 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || ||||| ||||| ||||| || |||| || | ||| ||| ||||| || || || Sbjct 31260599 GGGATTCCCTCTTTGTCTTGAATCTTGGCCTTGACATTATCAATTGTATCTGATGATTCC 31260658 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || |||||||| || | ||||| || || |||||||| Sbjct 31260659 ACCTCAAGGGTGATGGTTTTACCAGTCAATGTTTTCACGAAGATTTGCAT 31260708 Score = 132 bits (146), Expect = 9e-26 Identities = 172/238 (72%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||||||||| ||| |||| ||| | |||| || || || || Sbjct 31260244 AATTTGCATTCCGCCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTT 31260303 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || | || || || ||| |||| |||||| || ||||| || | ||||| || Sbjct 31260304 ATAATCAGCTAGGGTCCTTCCATCTTCTAGTTGTTTCCCTGCAAAGATAAGCCTCTGCTG 31260363 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || || ||||| || ||||| |||| || | ||| ||| ||||| || Sbjct 31260364 ATCAGGAGGGATACCCTCTTTGTCCTGTATCTTGGCCTTGACATTATCAATGGTATCCGA 31260423 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || ||||| |||| || || ||||| || || | || ||||| ||||| |||||| Sbjct 31260424 GGATTCAACCTCTAAGGTGATGGTTTTTCCAGTCAAAGTCTTTACGAATATCTGCATT 31260481 Score = 131 bits (144), Expect = 3e-25 Identities = 171/237 (72%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| |||||||| | | || | |||| ||||| || | || || ||||| Sbjct 31287523 AATTTGCATACCACCACGAAGCCGCAAAACCAAATGCAGAGTGGATTCCTTTTGGATATT 31287582 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || | | || || ||| || | |||||| || ||||| || | |||||| || Sbjct 31287583 ATAATCAGCAAGGGTCCTTCCATCTTCAAGTTGTTTCCCTGCAAAGATAAGTCTCTGCTG 31287642 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||||||||| || ||||| ||||| || || || | ||| | ||| ||||||||| || Sbjct 31287643 ATCAGGAGGGATGCCTTCCTTATCCTGAATCTTAGCTTTCACATTATCAATAGTATCTGA 31287702 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||| || | ||| |||||||| || || || || |||||||| |||||||| Sbjct 31287703 ACTCTCAACCTCCAAAGTAATAGTTTTTCCGGTAAGGGTCTTTACAAAAATTTGCAT 31287759 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||||| ||| |||| ||| | |||| || || || ||||| || Sbjct 31306451 ATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTAGATTCCTTCTGGATGTTATAATCA 31306510 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || |||| ||| || | ||||| || ||||| || | ||||| ||||||||| Sbjct 31306511 GCTAGGATTCTTCCATCCTCGAGCTGTTTACCTGCAAAGATAAGCCTCTGCTGATCAGGA 31306570 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| || |||| || | ||| ||| ||||||||| ||| Sbjct 31306571 GGGATACCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTATCGGAACTCTCT 31306630 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || ||||| ||||| | ||||| ||||| || ||||| Sbjct 31306631 ACCTCAAGAGTGATGGTTTTTCCTGTCAATGTTTTCACAAAGATCTGCAT 31306680 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||| |||| ||| |||||||| | |||| || || || ||||| || Sbjct 31287986 ATTCCACCTCTTAATCTAAGCACCAGATGAAGGGTAGATTCCTTCTGGATGTTATAATCA 31288045 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | ||||| || ||||| || | ||||| ||||||||| Sbjct 31288046 GCTAGGGTTCTTCCATCCTCGAGCTGTTTCCCTGCAAAGATAAGCCTCTGCTGATCAGGA 31288105 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| || |||| || | ||| ||| ||||| || || ||| Sbjct 31288106 GGGATACCCTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTATCAGATGATTCA 31288165 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || || | || || |||||||| ||||| Sbjct 31288166 ACCTCAAGGGTGATTGTTTTTCCGGTCAATGTCTTCACAAATATCTGCAT 31288215 Score = 114 bits (126), Expect = 2e-20 Identities = 135/183 (74%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 || ||||| |||| | || || ||| || | || || || ||||| || | ||| Sbjct 31260071 ATGTTATAATCGGCAAGTGTCCTTCCATCTTCAAGCTGCTTACCAGCAAAGATAAGCCTC 31260130 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||||||||| || || || |||||||| || || | ||| | ||| ||||||| Sbjct 31260131 TGTTGATCAGGAGGGATACCCTCCTTATCTTGAATCTTAGCTTTCACATTATCAATAGTA 31260190 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || ||| |||||| || | ||| |||||||| || |||| || || ||||| |||||| Sbjct 31260191 TCTGAACTCTCAACCTCCAAAGTAATAGTTTTTCCAGTTAAAGTCTTAACAAAAATTTGC 31260250 Query 193359 ATT 193361 ||| Sbjct 31260251 ATT 31260253 Score = 113 bits (124), Expect = 8e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||||||||||| ||| |||| ||| | || | ||| || ||| || Sbjct 31306217 ATTTGCATTCCACCTCTCAATCTAAGCACCAAATGAAGGGTGGACTCCTTTTGAATGTTG 31306276 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || ||| | || | || || ||||| || ||||| || || | || |||||| Sbjct 31306277 TAATCGCCAAGTGTGCGCCCGTCTTCCAATTGCTTACCGGCGAAGATAAGCCTTTGTTGA 31306336 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || || || || ||||| || || | ||| | ||| ||||||||| ||| Sbjct 31306337 TCGGGAGGGATACCCTCCTTGTCTTGAATCTTAGCTTTCACATTATCAATAGTATCTGAA 31306396 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||||| || | ||| ||||| || || || | || || |||||||| |||||| Sbjct 31306397 CTCTCAACCTCCAAAGTAATAGTCTTTCCAGTCAAAGTCTTAACAAATATCTGCATT 31306453 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||||| |||| ||||| |||||| || || | | || | | | Sbjct 31259582 CGAAGAACAAGATGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAGAGTACGACCA 31259641 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || || || |||||||| | ||||| ||||| || || || || || ||| Sbjct 31259642 TCCTCCAACTGCTTGCCAGCAAAAATAAGCCTCTGCTGATCTGGGGGAATACCCTCCTTA 31259701 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 |||||||| || | ||| | ||| ||||||||| || || || || | || ||| Sbjct 31259702 TCTTGTATCTTTGCTTTCACATTATCAATAGTATCAGAGCTTTCCACCTCCAAGGTAATA 31259761 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || |||||||||||||| Sbjct 31259762 GTCTTCCCAGTAAGTGTCTTCACAAATATTTGCAT 31259796 Score = 109 bits (120), Expect = 1e-18 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||| | || ||||| | || | |||||| || ||||| ||| Sbjct 35110912 ATACCACCACGAAGTCGCAAAACGAGATGAAGAGTTGACTCTTTCTGGATGTTATAATCG 35110971 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | |||||||| ||||| || | ||||| || || || Sbjct 35110972 GCCAATGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGT 35111031 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| |||||||| |||| || | ||| ||| ||||| || ||| Sbjct 35111032 GGGATACCCTCTTTGTCTTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCC 35111091 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || || || |||||||||||||| Sbjct 35111092 ACCTCAAGGGTGATTGTCTTTCCAGTGAGAGTCTTCACAAATATTTGCAT 35111141 Score = 100 bits (110), Expect = 5e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||| | || ||||| | || | ||| || || || ||||| Sbjct 36294328 ATACCACCGCGAAGTCGCAACACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCA 36294269 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | |||||||| ||||| || | ||||| || || || Sbjct 36294268 GCCAAGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGT 36294209 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || ||||| |||| || | ||| ||| ||||| || ||| Sbjct 36294208 GGAATACCTTCTTTGTCCTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCC 36294149 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || || || |||||||||||||| Sbjct 36294148 ACCTCAAGGGTGATTGTCTTTCCAGTGAGAGTCTTCACAAATATTTGCAT 36294099 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || |||||||||||||| || || || || | || | || || || || || || Sbjct 31288214 ATGCCACCTCTCAATCGCAGCACAAGGTGAAGGGTGGATTCCTTTTGGATGTTGTAATCC 31288273 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| || |||||||| || ||||| || | || || ||||| ||| Sbjct 31288274 GCAAGGGTGCGGCCATCTTCCAATTGTTTACCAGCAAATATAAGCCTTTGCTGATCGGGA 31288333 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| || || | ||| | || || ||||| ||| ||| Sbjct 31288334 GGAATACCTTCCTTGTCTTGAATCTTAGCTTTAACGTTGTCTATGGTATCAGAACTCTCC 31288393 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || |||||||| || || | ||||| ||||| |||||||| Sbjct 31288394 ACCTCGAGGGTGATAGTTTTGCCAGTCAATGTTTTCACAAAGATTTGCAT 31288443 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||||| |||| ||||| |||||| || || | || || | | | Sbjct 31286861 CGAAGAACAAGATGCAGGGTAGATTCTTTCTGAATATTGTAATCTGCCAAAGTACGACCA 31286920 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || || || |||||||| | || || || || || || || || || ||| Sbjct 31286921 TCCTCCAACTGCTTGCCAGCAAAAATAAGCCTTTGCTGGTCTGGTGGAATACCCTCCTTA 31286980 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || ||||| || | ||| | || ||| ||||| || || || || | || ||| Sbjct 31286981 TCCTGTATCTTCGCTTTCACGTTATCAATCGTATCAGAGCTTTCCACCTCCAAGGTAATA 31287040 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || |||||||||||||| Sbjct 31287041 GTCTTCCCGGTAAGAGTCTTCACAAATATTTGCAT 31287075 >seq8 Length=45569985 Score = 113 bits (124), Expect = 8e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||| | || ||||| | || | |||||| ||| ||||| || Sbjct 35000365 ATACCACCACGAAGTCGCAACACAAGATGGAGAGTTGACTCTTTCTGAATGTTATAATCA 35000424 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | |||||||| ||||| || | ||||| ||||| || Sbjct 35000425 GCCAAGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGATCTGGT 35000484 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| |||||||| |||| || | ||| ||| || || || ||| Sbjct 35000485 GGGATACCCTCTTTGTCTTGTATCTTGGCCTTGACATTGTCAATGGTGTCAGAGCTCTCC 35000544 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || ||||| || || || |||||||||||||| Sbjct 35000545 ACCTCAAGGGTAATTGTCTTTCCTGTGAGAGTCTTCACAAATATTTGCAT 35000594 Score = 105 bits (116), Expect = 1e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || || |||||||| || || | | || || ||||| || |||||||| ||| Sbjct 36460013 TCTTCCAACTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCAGGTGGAATTCCTTCCTTA 36459954 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| ||| | ||| || || |||||||||||||| || || ||||| Sbjct 36459953 TCCTGGATCTTGGCTTTGACATTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTTATC 36459894 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 || || |||||||| ||||| || || || ||||| || Sbjct 36459893 GTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCATCTT 36459856 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||| | || ||||| | || | ||| || || || || || Sbjct 6168170 ATACCACCGCGAAGTCGCAACACAAGATGGAGAGTTGACTCCTTCTGGATGTTGTAATCA 6168111 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | || ||||| ||| || | |||||||| ||||| || | ||||| || || || Sbjct 6168110 GCCAAGGTTCTGCCATCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGT 6168051 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| |||||||| |||| || | ||| ||| ||||| || ||| Sbjct 6168050 GGGATACCCTCTTTGTCTTGTATCTTGGCCTTAACATTGTCAATGGTATCAGAGCTCTCC 6167991 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || || || || |||||||||||||| Sbjct 6167990 ACCTCAAGGGTAATCGTCTTTCCAGTGAGAGTCTTCACAAATATTTGCAT 6167941 >seq1 Length=52991155 Score = 105 bits (116), Expect = 1e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| || ||||| | | || || || || || | || | |||||| ||||| Sbjct 28610599 ATTTGCATGCCACCACGGAGACGGAGAACAAGGTGAAGCGTGGACTCTTTCTGGATATTG 28610540 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 || || | | |||||| || |||| ||||||||||| || || | | ||||| Sbjct 28610539 TAATCCGCAAGAGTTCTACCGTCTTCTAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGG 28610480 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || ||||||||||| ||||| ||||||| ||| | || || || ||||| Sbjct 28610479 TCAGGTGGAATTCCTTCTTTGTCTTGGATTTTGGCTTTGACGTTGTCGATTGTGTCGGAT 28610420 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || ||||| ||||| ||||| || || | ||||| || || || ||||| Sbjct 28610419 GATTCTACCTCTAGGGTTATTGTTTTGCCGGTCAAGGTTTTCACGAAAATCTGCAT 28610364 >seq5 Length=43630510 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 ||||||||||| || || | | ||||| || || || ||||||||||| ||||| || Sbjct 14677187 TGTTTTCCGGCGAAGATGAGACGTTGTTGGTCCGGTGGGATTCCTTCTTTGTCTTGGATC 14677128 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| ||| | ||| || || || ||||| |||||||| || ||||| || || || Sbjct 14677127 TTGGCTTTCACATTGTCGATGGTGTCTGAAGATTCAACTTCGAGGGTTATTGTCTTCCCG 14677068 Query 193335 GTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| ||||| || || || ||||| || Sbjct 14677067 GTTAGGGTTTTCACGAAGATCTGCATCTT 14677039 >seq7 Length=49172423 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 193164 GTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCG 193223 |||| ||| || ||| || ||||| | | || || ||| || ||||| || || Sbjct 47990274 GTAGACTCCTTCTGAATGTTGTAGTCAGCAAGGGTCCTTCCATCCTCCAATTGCTTCCCA 47990215 Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 ||||| || || ||||| ||||| || || ||||| || || || |||||||| | ||| Sbjct 47990214 GCAAAGATCAACCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCCTGTATTTTAGCCTTT 47990155 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343 | ||| ||| || || || ||| || || | ||| || || || ||||| || ||| Sbjct 47990154 ACATTGTCAATCGTGTCCGAGCTCTCTACCTCCAAAGTAATTGTCTTTCCTGTAAGGGTT 47990095 Query 193344 TTTACAAATATTTGCAT 193360 |||||||| || ||||| Sbjct 47990094 TTTACAAAAATCTGCAT 47990078 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || ||||||||||||| | ||| || || ||||| || ||||| || ||||| || Sbjct 47989767 TGCTTGCCGGCAAAAATTAGACGCTGCTGGTCTGGAGGGATCCCTTCCTTGTCTTGAATC 47989708 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 |||| || | ||| ||| |||||||| ||| || || || || || || || ||| Sbjct 47989707 TTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCCACCTCAAGGGTGATTGTCTTTCCT 47989648 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||| |||||||| Sbjct 47989647 GTGAGAGTCTTCACAAAGATTTGCAT 47989622 >seq6 Length=35275713 Score = 93.3 bits (102), Expect = 8e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 193215 TGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATT 193274 || || || |||||||| | | ||| || ||||| || |||||||| || ||||| ||| Sbjct 24039229 TGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGTGGGATTCCTTCCTTGTCTTGAATT 24039170 Query 193275 TTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCT 193334 || | || | ||| || ||||| ||| ||||||||| ||||| || || || || Sbjct 24039169 TTTGCCTTAACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGATGGTCTTGCCA 24039110 Query 193335 GTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||||||||| Sbjct 24039109 GTAAGAGTCTTGACGAATATTTGCAT 24039084 Score = 89.7 bits (98), Expect = 9e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 193164 GTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCG 193223 |||| |||||| ||| || ||||| | | ||||| ||| || ||||| || || Sbjct 24039963 GTAGACTCTTTCTGAATGTTGTAGTCAGCAAGGGTTCTTCCATCCTCCAATTGCTTCCCA 24039904 Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 ||||| || || ||||||||||| || || |||||||| || || || ||||| | || Sbjct 24039903 GCAAAGATCAACCTCTGTTGATCTGGTGGGATTCCTTCCTTGTCCTGGATTTTTGCCTTA 24039844 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343 | ||| ||| || || ||| || || || | || || || || ||||| | || Sbjct 24039843 ACATTATCAATGGTGTCTGAACTTTCCACCTCCAATGTAATGGTCTTTCCTGTCAAAGTC 24039784 Query 193344 TTTACAAATATTTGCAT 193360 || ||||| || ||||| Sbjct 24039783 TTCACAAAGATCTGCAT 24039767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899629805697840